RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 TXKP42681 527 aa16.15■□□□□ 0.18
COL16A1-217ENST00000532877 PRMT2P55345 433 aa16.15■□□□□ 0.18
COL16A1-217ENST00000532877 GRIN1Q05586 938 aa16.15■□□□□ 0.18
COL16A1-217ENST00000532877 ITGB3BPQ13352 177 aaPredicted RBP16.15■□□□□ 0.18
COL16A1-217ENST00000532877 IL17AQ16552 155 aa16.15■□□□□ 0.18
COL16A1-217ENST00000532877 TRMT44Q8IYL2 757 aaKnown RBP16.15■□□□□ 0.18
COL16A1-217ENST00000532877 ABHD16BQ9H3Z7 469 aa16.15■□□□□ 0.18
COL16A1-217ENST00000532877 PCDHA7Q9UN72 937 aa16.15■□□□□ 0.18
COL16A1-217ENST00000532877 SRPRBQ9Y5M8 271 aaKnown RBP16.15■□□□□ 0.18
COL16A1-217ENST00000532877 ALPK3Q96L96 1907 aa16.15■□□□□ 0.18
COL16A1-217ENST00000532877 VWA3AA6NCI4 1184 aa16.14■□□□□ 0.17
COL16A1-217ENST00000532877 ATP9AO75110 1047 aa16.14■□□□□ 0.17
COL16A1-217ENST00000532877 KCNA2P16389 499 aa16.14■□□□□ 0.17
COL16A1-217ENST00000532877 UBA1P22314 1058 aaKnown RBP16.14■□□□□ 0.17
COL16A1-217ENST00000532877 FXR2P51116 673 aaKnown RBP eCLIP16.14■□□□□ 0.17
COL16A1-217ENST00000532877 ACVR2BQ13705 512 aa16.14■□□□□ 0.17
COL16A1-217ENST00000532877 TMEM266Q2M3C6 531 aa16.14■□□□□ 0.17
COL16A1-217ENST00000532877 AXDND1Q5T1B0 1012 aaPredicted RBP16.14■□□□□ 0.17
COL16A1-217ENST00000532877 LRCH2Q5VUJ6 765 aa16.14■□□□□ 0.17
COL16A1-217ENST00000532877 TAPT1Q6NXT6 567 aa16.14■□□□□ 0.17
COL16A1-217ENST00000532877 DTHD1Q6ZMT9 781 aa16.14■□□□□ 0.17
COL16A1-217ENST00000532877 RAET1EQ8TD07 263 aa16.14■□□□□ 0.17
COL16A1-217ENST00000532877 SCFD2Q8WU76 684 aa16.14■□□□□ 0.17
COL16A1-217ENST00000532877 CLIC6Q96NY7 704 aa16.14■□□□□ 0.17
COL16A1-217ENST00000532877 RIT2Q99578 217 aa16.14■□□□□ 0.17
COL16A1-217ENST00000532877 TTC12Q9H892 705 aaPredicted RBP16.14■□□□□ 0.17
COL16A1-217ENST00000532877 PDGFCQ9NRA1 345 aa16.14■□□□□ 0.17
COL16A1-217ENST00000532877 VAV3Q9UKW4 847 aa16.14■□□□□ 0.17
COL16A1-217ENST00000532877 ZHX1Q9UKY1 873 aaPredicted RBP16.14■□□□□ 0.17
COL16A1-217ENST00000532877 UNC80Q8N2C7 3258 aa16.13■□□□□ 0.17
COL16A1-217ENST00000532877 RBM47A0AV96 593 aaKnown RBP16.13■□□□□ 0.17
COL16A1-217ENST00000532877 GOLGA6L22H0YM25 854 aa16.13■□□□□ 0.17
COL16A1-217ENST00000532877 DHX15O43143 795 aaKnown RBP16.13■□□□□ 0.17
COL16A1-217ENST00000532877 ADCY3O60266 1144 aa16.13■□□□□ 0.17
COL16A1-217ENST00000532877 GAS7O60861 476 aa16.13■□□□□ 0.17
COL16A1-217ENST00000532877 CUTAO60888 179 aa16.13■□□□□ 0.17
COL16A1-217ENST00000532877 PSMD10O75832 226 aa16.13■□□□□ 0.17
COL16A1-217ENST00000532877 ARIH2O95376 493 aa16.13■□□□□ 0.17
COL16A1-217ENST00000532877 ELNP15502 786 aa16.13■□□□□ 0.17
COL16A1-217ENST00000532877 TECP42680 631 aa16.13■□□□□ 0.17
COL16A1-217ENST00000532877 SPIRE1Q08AE8 756 aa16.13■□□□□ 0.17
COL16A1-217ENST00000532877 MFSD14CQ5VZR4 134 aa16.13■□□□□ 0.17
COL16A1-217ENST00000532877 KCNV1Q6PIU1 500 aa16.13■□□□□ 0.17
COL16A1-217ENST00000532877 TEKT3Q9BXF9 490 aa16.13■□□□□ 0.17
COL16A1-217ENST00000532877 CSRNP2Q9H175 543 aa16.13■□□□□ 0.17
COL16A1-217ENST00000532877 PCDHA12Q9UN75 941 aa16.13■□□□□ 0.17
COL16A1-217ENST00000532877 NFASCO94856 1347 aa16.13■□□□□ 0.17
COL16A1-217ENST00000532877 POTEMA6NI47 508 aa16.12■□□□□ 0.17
COL16A1-217ENST00000532877 PRPF40AO75400 957 aaKnown RBP16.12■□□□□ 0.17
COL16A1-217ENST00000532877 HMGCRP04035 888 aa16.12■□□□□ 0.17
COL16A1-217ENST00000532877 ZNF865P0CJ78 1059 aaPredicted RBP16.12■□□□□ 0.17
COL16A1-217ENST00000532877 TGFB3P10600 412 aa16.12■□□□□ 0.17
COL16A1-217ENST00000532877 MCM4P33991 863 aa16.12■□□□□ 0.17
COL16A1-217ENST00000532877 SP2Q02086 613 aa16.12■□□□□ 0.17
COL16A1-217ENST00000532877 TTLL4Q14679 1199 aa16.12■□□□□ 0.17
COL16A1-217ENST00000532877 PRAMEF19Q5SWL8 479 aa16.12■□□□□ 0.17
COL16A1-217ENST00000532877 CCDC62Q6P9F0 684 aa16.12■□□□□ 0.17
COL16A1-217ENST00000532877 IGSF22Q8N9C0 903 aa16.12■□□□□ 0.17
COL16A1-217ENST00000532877 PXYLP1Q8TE99 480 aa16.12■□□□□ 0.17
COL16A1-217ENST00000532877 SENP7Q9BQF6 1050 aa16.12■□□□□ 0.17
COL16A1-217ENST00000532877 TBC1D22BQ9NU19 505 aa16.12■□□□□ 0.17
COL16A1-217ENST00000532877 NRBP1Q9UHY1 535 aa16.12■□□□□ 0.17
COL16A1-217ENST00000532877 DDX41Q9UJV9 622 aaKnown RBP16.12■□□□□ 0.17
COL16A1-217ENST00000532877 DDX39AO00148 427 aaKnown RBP16.11■□□□□ 0.17
COL16A1-217ENST00000532877 GADD45BO75293 160 aaPredicted RBP16.11■□□□□ 0.17
COL16A1-217ENST00000532877 TXNP10599 105 aaKnown RBP16.11■□□□□ 0.17
COL16A1-217ENST00000532877 CYBAP13498 195 aa16.11■□□□□ 0.17
COL16A1-217ENST00000532877 LONP1P36776 959 aaKnown RBP16.11■□□□□ 0.17
COL16A1-217ENST00000532877 ADCYAP1R1P41586 468 aa16.11■□□□□ 0.17
COL16A1-217ENST00000532877 TRIM32Q13049 653 aa16.11■□□□□ 0.17
COL16A1-217ENST00000532877 PPP2R5CQ13362 524 aa16.11■□□□□ 0.17
COL16A1-217ENST00000532877 LY6KQ17RY6 165 aa16.11■□□□□ 0.17
COL16A1-217ENST00000532877 CCDC144BQ3MJ40 725 aa16.11■□□□□ 0.17
COL16A1-217ENST00000532877 ADALQ6DHV7 355 aa16.11■□□□□ 0.17
COL16A1-217ENST00000532877 B3GNT9Q6UX72 402 aa16.11■□□□□ 0.17
COL16A1-217ENST00000532877 ZNF579Q8NAF0 562 aaKnown RBP16.11■□□□□ 0.17
COL16A1-217ENST00000532877 SLAIN1Q8ND83 568 aa16.11■□□□□ 0.17
COL16A1-217ENST00000532877 TRPV1Q8NER1 839 aa16.11■□□□□ 0.17
COL16A1-217ENST00000532877 SH3TC2Q8TF17 1288 aa16.11■□□□□ 0.17
COL16A1-217ENST00000532877 SDF4Q9BRK5 362 aa16.11■□□□□ 0.17
COL16A1-217ENST00000532877 RAB34Q9BZG1 259 aa16.11■□□□□ 0.17
COL16A1-217ENST00000532877 UNC45AQ9H3U1 944 aa16.11■□□□□ 0.17
COL16A1-217ENST00000532877 BCAS3Q9H6U6 928 aa16.11■□□□□ 0.17
COL16A1-217ENST00000532877 JPH1Q9HDC5 661 aaPredicted RBP16.11■□□□□ 0.17
COL16A1-217ENST00000532877 LMBRD1Q9NUN5 540 aa16.11■□□□□ 0.17
COL16A1-217ENST00000532877 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.1■□□□□ 0.17
COL16A1-217ENST00000532877 DDX11L8A8MPP1 907 aa16.1■□□□□ 0.17
COL16A1-217ENST00000532877 GGPS1O95749 300 aa16.1■□□□□ 0.17
COL16A1-217ENST00000532877 NEDD9Q14511 834 aa16.1■□□□□ 0.17
COL16A1-217ENST00000532877 PDIA5Q14554 519 aa16.1■□□□□ 0.17
COL16A1-217ENST00000532877 TPRNQ4KMQ1 711 aa16.1■□□□□ 0.17
COL16A1-217ENST00000532877 SPECC1Q5M775 1068 aa16.1■□□□□ 0.17
COL16A1-217ENST00000532877 TMEM63BQ5T3F8 832 aa16.1■□□□□ 0.17
COL16A1-217ENST00000532877 NCAPH2Q6IBW4 605 aa16.1■□□□□ 0.17
COL16A1-217ENST00000532877 SHC4Q6S5L8 630 aa16.1■□□□□ 0.17
COL16A1-217ENST00000532877 CYFIP1Q7L576 1253 aa16.1■□□□□ 0.17
COL16A1-217ENST00000532877 GIMAP8Q8ND71 665 aaPredicted RBP16.1■□□□□ 0.17
COL16A1-217ENST00000532877 AK8Q96MA6 479 aa16.1■□□□□ 0.17
COL16A1-217ENST00000532877 A0A1W2PQ27 194 aa16.09■□□□□ 0.17
COL16A1-217ENST00000532877 A0A1W2PQ64 194 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms