RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 TGFB3P10600 412 aa17.59■□□□□ 0.41
DEPDC7-204ENST00000532078 HOXD8P13378 290 aaPredicted RBP17.59■□□□□ 0.41
DEPDC7-204ENST00000532078 TROAPQ12815 778 aa17.59■□□□□ 0.41
DEPDC7-204ENST00000532078 CCDC85BQ15834 202 aaPredicted RBP17.59■□□□□ 0.41
DEPDC7-204ENST00000532078 KIAA0753Q2KHM9 967 aa17.59■□□□□ 0.41
DEPDC7-204ENST00000532078 CELF3Q5SZQ8 465 aaKnown RBP17.59■□□□□ 0.41
DEPDC7-204ENST00000532078 MYSM1Q5VVJ2 828 aa17.59■□□□□ 0.41
DEPDC7-204ENST00000532078 IL31RAQ8NI17 732 aa17.59■□□□□ 0.41
DEPDC7-204ENST00000532078 DHX38Q92620 1227 aaKnown RBP17.59■□□□□ 0.41
DEPDC7-204ENST00000532078 KHSRPQ92945 711 aaKnown RBP eCLIP17.59■□□□□ 0.41
DEPDC7-204ENST00000532078 SPATA33Q96N06 139 aa17.59■□□□□ 0.41
DEPDC7-204ENST00000532078 SENP2Q9HC62 589 aa17.59■□□□□ 0.41
DEPDC7-204ENST00000532078 TAF6LQ9Y6J9 622 aa17.59■□□□□ 0.41
DEPDC7-204ENST00000532078 TET1Q8NFU7 2136 aa17.59■□□□□ 0.41
DEPDC7-204ENST00000532078 TRIP12Q14669 1992 aaPredicted RBP17.59■□□□□ 0.41
DEPDC7-204ENST00000532078 MYH7BA7E2Y1 1941 aa17.59■□□□□ 0.41
DEPDC7-204ENST00000532078 REV3LO60673 3130 aa17.58■□□□□ 0.41
DEPDC7-204ENST00000532078 HAS3O00219 553 aa17.58■□□□□ 0.4
DEPDC7-204ENST00000532078 CYTH3O43739 400 aa17.58■□□□□ 0.4
DEPDC7-204ENST00000532078 PPFIA4O75335 1185 aa17.58■□□□□ 0.4
DEPDC7-204ENST00000532078 UBA1P22314 1058 aaKnown RBP17.58■□□□□ 0.4
DEPDC7-204ENST00000532078 PTK7Q13308 1070 aa17.58■□□□□ 0.4
DEPDC7-204ENST00000532078 FCHSD1Q86WN1 690 aa17.58■□□□□ 0.4
DEPDC7-204ENST00000532078 BAZ2BQ9UIF8 2168 aaKnown RBP17.57■□□□□ 0.4
DEPDC7-204ENST00000532078 FRMPD4Q14CM0 1322 aa17.57■□□□□ 0.4
DEPDC7-204ENST00000532078 CKBP12277 381 aa17.57■□□□□ 0.4
DEPDC7-204ENST00000532078 HSDL1Q3SXM5 330 aa17.57■□□□□ 0.4
DEPDC7-204ENST00000532078 GNPTABQ3T906 1256 aa17.57■□□□□ 0.4
DEPDC7-204ENST00000532078 CNKSR3Q6P9H4 555 aa17.57■□□□□ 0.4
DEPDC7-204ENST00000532078 MB21D2Q8IYB1 491 aaPredicted RBP17.57■□□□□ 0.4
DEPDC7-204ENST00000532078 MICALL1Q8N3F8 863 aa17.57■□□□□ 0.4
DEPDC7-204ENST00000532078 OXER1Q8TDS5 423 aa17.57■□□□□ 0.4
DEPDC7-204ENST00000532078 MAP4K1Q92918 833 aa17.57■□□□□ 0.4
DEPDC7-204ENST00000532078 WDR70Q9NW82 654 aa17.57■□□□□ 0.4
DEPDC7-204ENST00000532078 FAM205CA6NFA0 338 aa17.56■□□□□ 0.4
DEPDC7-204ENST00000532078 SORBS3O60504 671 aa17.56■□□□□ 0.4
DEPDC7-204ENST00000532078 STAM2O75886 525 aa17.56■□□□□ 0.4
DEPDC7-204ENST00000532078 DDAH1O94760 285 aa17.56■□□□□ 0.4
DEPDC7-204ENST00000532078 CXCL10P02778 98 aa17.56■□□□□ 0.4
DEPDC7-204ENST00000532078 NUDT7P0C024 238 aa17.56■□□□□ 0.4
DEPDC7-204ENST00000532078 KIF5BP33176 963 aa17.56■□□□□ 0.4
DEPDC7-204ENST00000532078 ANTXR2P58335 489 aa17.56■□□□□ 0.4
DEPDC7-204ENST00000532078 WDR5P61964 334 aaKnown RBP17.56■□□□□ 0.4
DEPDC7-204ENST00000532078 MRPS5P82675 430 aaKnown RBP17.56■□□□□ 0.4
DEPDC7-204ENST00000532078 IL27Q8NEV9 243 aa17.56■□□□□ 0.4
DEPDC7-204ENST00000532078 CTCFLQ8NI51 663 aaPredicted RBP17.56■□□□□ 0.4
DEPDC7-204ENST00000532078 ASB2Q96Q27 587 aa17.56■□□□□ 0.4
DEPDC7-204ENST00000532078 MAP3K14Q99558 947 aa17.56■□□□□ 0.4
DEPDC7-204ENST00000532078 SPZ1Q9BXG8 430 aa17.56■□□□□ 0.4
DEPDC7-204ENST00000532078 MLXIPQ9HAP2 919 aa17.56■□□□□ 0.4
DEPDC7-204ENST00000532078 RBM8AQ9Y5S9 174 aaKnown RBP17.56■□□□□ 0.4
DEPDC7-204ENST00000532078 BDP1A6H8Y1 2624 aa17.55■□□□□ 0.4
DEPDC7-204ENST00000532078 PTPRSQ13332 1948 aa17.55■□□□□ 0.4
DEPDC7-204ENST00000532078 TLL1O43897 1013 aa17.55■□□□□ 0.4
DEPDC7-204ENST00000532078 EFCAB14O75071 495 aa17.55■□□□□ 0.4
DEPDC7-204ENST00000532078 IRX6P78412 446 aaPredicted RBP17.55■□□□□ 0.4
DEPDC7-204ENST00000532078 SP2Q02086 613 aa17.55■□□□□ 0.4
DEPDC7-204ENST00000532078 TAP1Q03518 808 aa17.55■□□□□ 0.4
DEPDC7-204ENST00000532078 CASC1Q6TDU7 716 aa17.55■□□□□ 0.4
DEPDC7-204ENST00000532078 ZNF654Q8IZM8 581 aa17.55■□□□□ 0.4
DEPDC7-204ENST00000532078 IGDCC4Q8TDY8 1250 aa17.55■□□□□ 0.4
DEPDC7-204ENST00000532078 RRP36Q96EU6 259 aaKnown RBP17.55■□□□□ 0.4
DEPDC7-204ENST00000532078 MTA3Q9BTC8 594 aa17.55■□□□□ 0.4
DEPDC7-204ENST00000532078 LY9Q9HBG7 655 aa17.55■□□□□ 0.4
DEPDC7-204ENST00000532078 MUC3AQ02505 3323 aa17.55■□□□□ 0.4
DEPDC7-204ENST00000532078 EMSYQ7Z589 1322 aa17.54■□□□□ 0.4
DEPDC7-204ENST00000532078 ABHD14A-ACY1A0A1B0GW23 586 aa17.54■□□□□ 0.4
DEPDC7-204ENST00000532078 TNFRSF10AO00220 468 aa17.54■□□□□ 0.4
DEPDC7-204ENST00000532078 NOP56O00567 594 aaKnown RBP17.54■□□□□ 0.4
DEPDC7-204ENST00000532078 NBNO60934 754 aa17.54■□□□□ 0.4
DEPDC7-204ENST00000532078 POU3F3P20264 500 aaPredicted RBP17.54■□□□□ 0.4
DEPDC7-204ENST00000532078 GPNMBQ14956 572 aa17.54■□□□□ 0.4
DEPDC7-204ENST00000532078 TRIM71Q2Q1W2 868 aaKnown RBP17.54■□□□□ 0.4
DEPDC7-204ENST00000532078 PIBF1Q8WXW3 757 aa17.54■□□□□ 0.4
DEPDC7-204ENST00000532078 ARNTL2Q8WYA1 636 aa17.54■□□□□ 0.4
DEPDC7-204ENST00000532078 GPKOWQ92917 476 aaPredicted RBP eCLIP17.54■□□□□ 0.4
DEPDC7-204ENST00000532078 CUL5Q93034 780 aa17.54■□□□□ 0.4
DEPDC7-204ENST00000532078 INPP4AQ96PE3 977 aaPredicted RBP17.54■□□□□ 0.4
DEPDC7-204ENST00000532078 ZBED2Q9BTP6 218 aa17.54■□□□□ 0.4
DEPDC7-204ENST00000532078 CERS4Q9HA82 394 aa17.54■□□□□ 0.4
DEPDC7-204ENST00000532078 SEC63Q9UGP8 760 aaKnown RBP17.54■□□□□ 0.4
DEPDC7-204ENST00000532078 COL4A4P53420 1690 aaPredicted RBP17.53■□□□□ 0.4
DEPDC7-204ENST00000532078 PRC1O43663 620 aa17.53■□□□□ 0.4
DEPDC7-204ENST00000532078 ICAM3P32942 547 aa17.53■□□□□ 0.4
DEPDC7-204ENST00000532078 ZNF618Q5T7W0 954 aa17.53■□□□□ 0.4
DEPDC7-204ENST00000532078 SERINC5Q86VE9 423 aa17.53■□□□□ 0.4
DEPDC7-204ENST00000532078 SMARCC2Q8TAQ2 1214 aa17.53■□□□□ 0.4
DEPDC7-204ENST00000532078 LZTS2Q9BRK4 669 aa17.53■□□□□ 0.4
DEPDC7-204ENST00000532078 C16orf70Q9BSU1 422 aa17.53■□□□□ 0.4
DEPDC7-204ENST00000532078 MTCH2Q9Y6C9 303 aa17.53■□□□□ 0.4
DEPDC7-204ENST00000532078 C17orf102A2RUQ5 167 aa17.52■□□□□ 0.4
DEPDC7-204ENST00000532078 EPOPA6NHQ4 379 aa17.52■□□□□ 0.4
DEPDC7-204ENST00000532078 H3BRB1 525 aa17.52■□□□□ 0.4
DEPDC7-204ENST00000532078 RFXAPO00287 272 aa17.52■□□□□ 0.4
DEPDC7-204ENST00000532078 FIBPO43427 364 aa17.52■□□□□ 0.4
DEPDC7-204ENST00000532078 ARHGEF15O94989 841 aa17.52■□□□□ 0.4
DEPDC7-204ENST00000532078 LGALS2P05162 132 aa17.52■□□□□ 0.4
DEPDC7-204ENST00000532078 SMARCA1P28370 1054 aa17.52■□□□□ 0.4
DEPDC7-204ENST00000532078 MCM5P33992 734 aa17.52■□□□□ 0.4
DEPDC7-204ENST00000532078 GNAQP50148 359 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms