RNA–Protein interactions for RNA: ENST00000531546.1

CASP4-210, Transcript of caspase 4, humanhuman

TSL 2

Gene CASP4, Length 921 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-210ENST00000531546 HEATR6Q6AI08 1181 aaKnown RBP7.57□□□□□ -1.2
CASP4-210ENST00000531546 PLEKHH3Q7Z736 793 aa7.57□□□□□ -1.2
CASP4-210ENST00000531546 CPNE8Q86YQ8 564 aa7.57□□□□□ -1.2
CASP4-210ENST00000531546 CDK5RAP1Q96SZ6 601 aaKnown RBP7.57□□□□□ -1.2
CASP4-210ENST00000531546 SSBP3Q9BWW4 388 aaPredicted RBP7.57□□□□□ -1.2
CASP4-210ENST00000531546 KRTAP9-8Q9BYQ0 159 aa7.57□□□□□ -1.2
CASP4-210ENST00000531546 TSC22D4Q9Y3Q8 395 aa7.57□□□□□ -1.2
CASP4-210ENST00000531546 ATP7AQ04656 1500 aa7.57□□□□□ -1.2
CASP4-210ENST00000531546 NLRP1Q9C000 1473 aa7.56□□□□□ -1.2
CASP4-210ENST00000531546 PPM1BO75688 479 aa7.56□□□□□ -1.2
CASP4-210ENST00000531546 NTRK1P04629 796 aa7.56□□□□□ -1.2
CASP4-210ENST00000531546 DPY19L1Q2PZI1 675 aa7.56□□□□□ -1.2
CASP4-210ENST00000531546 USP51Q70EK9 711 aa7.56□□□□□ -1.2
CASP4-210ENST00000531546 SH3RF3Q8TEJ3 882 aaPredicted RBP7.56□□□□□ -1.2
CASP4-210ENST00000531546 SCAND2PQ9GZW5 306 aaPredicted RBP7.56□□□□□ -1.2
CASP4-210ENST00000531546 ST6GALNAC2Q9UJ37 374 aa7.56□□□□□ -1.2
CASP4-210ENST00000531546 SYCP2Q9BX26 1530 aa7.56□□□□□ -1.2
CASP4-210ENST00000531546 MSH6P52701 1360 aa7.56□□□□□ -1.2
CASP4-210ENST00000531546 PZPP20742 1482 aa7.55□□□□□ -1.2
CASP4-210ENST00000531546 PLXNC1O60486 1568 aa7.55□□□□□ -1.2
CASP4-210ENST00000531546 OVOL3O00110 214 aa7.55□□□□□ -1.2
CASP4-210ENST00000531546 PPP1R11O60927 126 aaPredicted RBP7.55□□□□□ -1.2
CASP4-210ENST00000531546 C9orf131Q5VYM1 1079 aa7.55□□□□□ -1.2
CASP4-210ENST00000531546 MCTP2Q6DN12 878 aa7.55□□□□□ -1.2
CASP4-210ENST00000531546 RUFY4Q6ZNE9 571 aa7.55□□□□□ -1.2
CASP4-210ENST00000531546 ADAT2Q7Z6V5 191 aaKnown RBP7.55□□□□□ -1.2
CASP4-210ENST00000531546 MIB1Q86YT6 1006 aa7.55□□□□□ -1.2
CASP4-210ENST00000531546 LCORQ96JN0 433 aaPredicted RBP7.55□□□□□ -1.2
CASP4-210ENST00000531546 BCL2L13Q9BXK5 485 aa7.55□□□□□ -1.2
CASP4-210ENST00000531546 KLHL25Q9H0H3 589 aa7.55□□□□□ -1.2
CASP4-210ENST00000531546 PHAXQ9H814 394 aaKnown RBP7.55□□□□□ -1.2
CASP4-210ENST00000531546 CGGBP1Q9UFW8 167 aaPredicted RBP7.55□□□□□ -1.2
CASP4-210ENST00000531546 SCAF11Q99590 1463 aaKnown RBP7.55□□□□□ -1.2
CASP4-210ENST00000531546 SHPRHQ149N8 1683 aa7.54□□□□□ -1.2
CASP4-210ENST00000531546 TROQ12816 1431 aaPredicted RBP7.54□□□□□ -1.2
CASP4-210ENST00000531546 FGD6Q6ZV73 1430 aa7.54□□□□□ -1.2
CASP4-210ENST00000531546 MIA2Q96PC5 1412 aa7.54□□□□□ -1.2
CASP4-210ENST00000531546 C9orf118A6NHY6 69 aa7.54□□□□□ -1.2
CASP4-210ENST00000531546 LAMTOR5O43504 91 aa7.54□□□□□ -1.2
CASP4-210ENST00000531546 VAMP4O75379 141 aa7.54□□□□□ -1.2
CASP4-210ENST00000531546 FUCA1P04066 466 aa7.54□□□□□ -1.2
CASP4-210ENST00000531546 GNPTABQ3T906 1256 aa7.54□□□□□ -1.2
CASP4-210ENST00000531546 TXNDC5Q8NBS9 432 aaKnown RBP7.54□□□□□ -1.2
CASP4-210ENST00000531546 PPT2Q9UMR5 302 aa7.54□□□□□ -1.2
CASP4-210ENST00000531546 SIT1Q9Y3P8 196 aa7.54□□□□□ -1.2
CASP4-210ENST00000531546 MAP3K1Q13233 1512 aa7.53□□□□□ -1.2
CASP4-210ENST00000531546 C7orf72A4D263 438 aa7.53□□□□□ -1.2
CASP4-210ENST00000531546 HNRNPMP52272 730 aaKnown RBP eCLIP7.53□□□□□ -1.2
CASP4-210ENST00000531546 CRIP3Q6Q6R5 217 aa7.53□□□□□ -1.2
CASP4-210ENST00000531546 CD300LDQ6UXZ3 194 aa7.53□□□□□ -1.2
CASP4-210ENST00000531546 LIMS2Q7Z4I7 341 aa7.53□□□□□ -1.2
CASP4-210ENST00000531546 SPRED1Q7Z699 444 aa7.53□□□□□ -1.2
CASP4-210ENST00000531546 MRIQ9BWK5 157 aa7.53□□□□□ -1.2
CASP4-210ENST00000531546 NGRNQ9NPE2 291 aaKnown RBP7.53□□□□□ -1.2
CASP4-210ENST00000531546 LTBP3Q9NS15 1303 aa7.52□□□□□ -1.2
CASP4-210ENST00000531546 WASHC2CQ9Y4E1 1318 aa7.52□□□□□ -1.2
CASP4-210ENST00000531546 CFAP65Q6ZU64 1925 aaKnown RBP7.52□□□□□ -1.2
CASP4-210ENST00000531546 ADGBQ8N7X0 1667 aa7.52□□□□□ -1.21
CASP4-210ENST00000531546 TIAM1Q13009 1591 aa7.52□□□□□ -1.21
CASP4-210ENST00000531546 FZD7O75084 574 aa7.52□□□□□ -1.21
CASP4-210ENST00000531546 ITGA1P56199 1179 aa7.52□□□□□ -1.21
CASP4-210ENST00000531546 TMEM87AQ8NBN3 555 aa7.52□□□□□ -1.21
CASP4-210ENST00000531546 GIPC2Q8TF65 315 aa7.52□□□□□ -1.21
CASP4-210ENST00000531546 SEC14L1Q92503 715 aa7.52□□□□□ -1.21
CASP4-210ENST00000531546 RCC1LQ96I51 464 aaKnown RBP7.52□□□□□ -1.21
CASP4-210ENST00000531546 INO80Q9ULG1 1556 aaPredicted RBP7.51□□□□□ -1.21
CASP4-210ENST00000531546 EPHX1P07099 455 aa7.51□□□□□ -1.21
CASP4-210ENST00000531546 ACVRL1P37023 503 aa7.51□□□□□ -1.21
CASP4-210ENST00000531546 SLC7A5Q01650 507 aa7.51□□□□□ -1.21
CASP4-210ENST00000531546 PRR31Q5SQ13 230 aa7.51□□□□□ -1.21
CASP4-210ENST00000531546 ARHGEF39Q8N4T4 335 aa7.51□□□□□ -1.21
CASP4-210ENST00000531546 CRBNQ96SW2 442 aa7.51□□□□□ -1.21
CASP4-210ENST00000531546 MARCH2Q9P0N8 246 aa7.51□□□□□ -1.21
CASP4-210ENST00000531546 SUGT1Q9Y2Z0 365 aa7.51□□□□□ -1.21
CASP4-210ENST00000531546 EID1Q9Y6B2 187 aa7.51□□□□□ -1.21
CASP4-210ENST00000531546 CDC42BPAQ5VT25 1732 aa7.51□□□□□ -1.21
CASP4-210ENST00000531546 DDX3XO00571 662 aaKnown RBP eCLIP7.5□□□□□ -1.21
CASP4-210ENST00000531546 KIF3BO15066 747 aa7.5□□□□□ -1.21
CASP4-210ENST00000531546 SLPIP03973 132 aa7.5□□□□□ -1.21
CASP4-210ENST00000531546 ZNF76P36508 570 aa7.5□□□□□ -1.21
CASP4-210ENST00000531546 SLC6A11P48066 632 aa7.5□□□□□ -1.21
CASP4-210ENST00000531546 COL9A2Q14055 689 aaPredicted RBP7.5□□□□□ -1.21
CASP4-210ENST00000531546 DEFB132Q7Z7B7 95 aa7.5□□□□□ -1.21
CASP4-210ENST00000531546 FAM126BQ8IXS8 530 aa7.5□□□□□ -1.21
CASP4-210ENST00000531546 Q8N1X5 172 aa7.5□□□□□ -1.21
CASP4-210ENST00000531546 PLEKHO2Q8TD55 490 aa7.5□□□□□ -1.21
CASP4-210ENST00000531546 FGD4Q96M96 766 aa7.5□□□□□ -1.21
CASP4-210ENST00000531546 MENTQ9BUN1 341 aa7.5□□□□□ -1.21
CASP4-210ENST00000531546 SLITRK6Q9H5Y7 841 aa7.5□□□□□ -1.21
CASP4-210ENST00000531546 CEP350Q5VT06 3117 aa7.5□□□□□ -1.21
CASP4-210ENST00000531546 SGSM2O43147 1006 aa7.49□□□□□ -1.21
CASP4-210ENST00000531546 B4GALT3O60512 393 aa7.49□□□□□ -1.21
CASP4-210ENST00000531546 CDSNQ15517 529 aa7.49□□□□□ -1.21
CASP4-210ENST00000531546 PRAMEF18Q5VWM3 479 aa7.49□□□□□ -1.21
CASP4-210ENST00000531546 CRACR2BQ8N4Y2 399 aaPredicted RBP7.49□□□□□ -1.21
CASP4-210ENST00000531546 FAM26EQ8N5C1 309 aa7.49□□□□□ -1.21
CASP4-210ENST00000531546 C19orf47Q8N9M1 422 aaKnown RBP7.49□□□□□ -1.21
CASP4-210ENST00000531546 MMP19Q99542 508 aa7.49□□□□□ -1.21
CASP4-210ENST00000531546 KLC2Q9H0B6 622 aa7.49□□□□□ -1.21
CASP4-210ENST00000531546 VPS11Q9H270 941 aa7.49□□□□□ -1.21
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