RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 FRMPD3Q5JV73 1810 aa12.56□□□□□ -0.4
CAPN1-221ENST00000531068 STXBP3O00186 592 aa12.56□□□□□ -0.4
CAPN1-221ENST00000531068 PRPF3O43395 683 aaKnown RBP12.56□□□□□ -0.4
CAPN1-221ENST00000531068 SORBS3O60504 671 aa12.56□□□□□ -0.4
CAPN1-221ENST00000531068 IQCF3P0C7M6 154 aa12.56□□□□□ -0.4
CAPN1-221ENST00000531068 ZNF286BP0CG31 522 aa12.56□□□□□ -0.4
CAPN1-221ENST00000531068 GNAT1P11488 350 aa12.56□□□□□ -0.4
CAPN1-221ENST00000531068 ACTN1P12814 892 aa12.56□□□□□ -0.4
CAPN1-221ENST00000531068 ITGB5P18084 799 aa12.56□□□□□ -0.4
CAPN1-221ENST00000531068 EVCP57679 992 aa12.56□□□□□ -0.4
CAPN1-221ENST00000531068 AP3B2Q13367 1082 aa12.56□□□□□ -0.4
CAPN1-221ENST00000531068 MTMR1Q13613 665 aa12.56□□□□□ -0.4
CAPN1-221ENST00000531068 UBE2SQ16763 222 aa12.56□□□□□ -0.4
CAPN1-221ENST00000531068 PFKFB3Q16875 520 aaPredicted RBP12.56□□□□□ -0.4
CAPN1-221ENST00000531068 GDF6Q6KF10 455 aaPredicted RBP12.56□□□□□ -0.4
CAPN1-221ENST00000531068 AFAP1L1Q8TED9 768 aa12.56□□□□□ -0.4
CAPN1-221ENST00000531068 SCLYQ96I15 445 aa12.56□□□□□ -0.4
CAPN1-221ENST00000531068 C16orf70Q9BSU1 422 aa12.56□□□□□ -0.4
CAPN1-221ENST00000531068 SEMA6BQ9H3T3 888 aa12.56□□□□□ -0.4
CAPN1-221ENST00000531068 JADE2Q9NQC1 790 aa12.56□□□□□ -0.4
CAPN1-221ENST00000531068 ZNF215Q9UL58 517 aaPredicted RBP12.56□□□□□ -0.4
CAPN1-221ENST00000531068 STXBP5LQ9Y2K9 1186 aa12.56□□□□□ -0.4
CAPN1-221ENST00000531068 UBIAD1Q9Y5Z9 338 aa12.56□□□□□ -0.4
CAPN1-221ENST00000531068 LGALS2P05162 132 aa12.55□□□□□ -0.4
CAPN1-221ENST00000531068 SCG2P13521 617 aa12.55□□□□□ -0.4
CAPN1-221ENST00000531068 SELPP16109 830 aa12.55□□□□□ -0.4
CAPN1-221ENST00000531068 GNA11P29992 359 aa12.55□□□□□ -0.4
CAPN1-221ENST00000531068 PDIA3P30101 505 aaKnown RBP12.55□□□□□ -0.4
CAPN1-221ENST00000531068 SEMA3FQ13275 785 aa12.55□□□□□ -0.4
CAPN1-221ENST00000531068 PTK7Q13308 1070 aa12.55□□□□□ -0.4
CAPN1-221ENST00000531068 OTOP2Q7RTS6 562 aa12.55□□□□□ -0.4
CAPN1-221ENST00000531068 PPP1R13LQ8WUF5 828 aa12.55□□□□□ -0.4
CAPN1-221ENST00000531068 SEPT1Q8WYJ6 367 aa12.55□□□□□ -0.4
CAPN1-221ENST00000531068 GPR20Q99678 358 aa12.55□□□□□ -0.4
CAPN1-221ENST00000531068 FTOQ9C0B1 505 aaKnown RBP eCLIP12.55□□□□□ -0.4
CAPN1-221ENST00000531068 C6orf50Q9HD87 102 aa12.55□□□□□ -0.4
CAPN1-221ENST00000531068 MSRAQ9UJ68 235 aa12.55□□□□□ -0.4
CAPN1-221ENST00000531068 SLC4A7Q9Y6M7 1214 aa12.55□□□□□ -0.4
CAPN1-221ENST00000531068 ESYT2A0FGR8 921 aa12.54□□□□□ -0.4
CAPN1-221ENST00000531068 C17orf102A2RUQ5 167 aa12.54□□□□□ -0.4
CAPN1-221ENST00000531068 IFNAR1P17181 557 aa12.54□□□□□ -0.4
CAPN1-221ENST00000531068 RBL2Q08999 1139 aa12.54□□□□□ -0.4
CAPN1-221ENST00000531068 RAB30Q15771 203 aa12.54□□□□□ -0.4
CAPN1-221ENST00000531068 TYW1BQ6NUM6 668 aa12.54□□□□□ -0.4
CAPN1-221ENST00000531068 CPLX2Q6PUV4 134 aaKnown RBP12.54□□□□□ -0.4
CAPN1-221ENST00000531068 DEFB128Q7Z7B8 93 aa12.54□□□□□ -0.4
CAPN1-221ENST00000531068 TRIM22Q8IYM9 498 aa12.54□□□□□ -0.4
CAPN1-221ENST00000531068 BICD2Q8TD16 824 aa12.54□□□□□ -0.4
CAPN1-221ENST00000531068 ZNF274Q96GC6 653 aaPredicted RBP12.54□□□□□ -0.4
CAPN1-221ENST00000531068 MXRA8Q9BRK3 442 aa12.54□□□□□ -0.4
CAPN1-221ENST00000531068 RNF26Q9BY78 433 aaPredicted RBP12.54□□□□□ -0.4
CAPN1-221ENST00000531068 BCAS3Q9H6U6 928 aa12.54□□□□□ -0.4
CAPN1-221ENST00000531068 PDRG1Q9NUG6 133 aa12.54□□□□□ -0.4
CAPN1-221ENST00000531068 ZBBXA8MT70 800 aa12.53□□□□□ -0.4
CAPN1-221ENST00000531068 CPLX1O14810 134 aa12.53□□□□□ -0.4
CAPN1-221ENST00000531068 ATP9AO75110 1047 aa12.53□□□□□ -0.4
CAPN1-221ENST00000531068 DNAJB2P25686 324 aa12.53□□□□□ -0.4
CAPN1-221ENST00000531068 ZNF76P36508 570 aa12.53□□□□□ -0.4
CAPN1-221ENST00000531068 SREBF1P36956 1147 aa12.53□□□□□ -0.4
CAPN1-221ENST00000531068 CLK2P49760 499 aaKnown RBP12.53□□□□□ -0.4
CAPN1-221ENST00000531068 CEP55Q53EZ4 464 aa12.53□□□□□ -0.4
CAPN1-221ENST00000531068 UTP14CQ5TAP6 766 aaKnown RBP12.53□□□□□ -0.4
CAPN1-221ENST00000531068 CCDC148Q8NFR7 591 aa12.53□□□□□ -0.4
CAPN1-221ENST00000531068 TNPO1Q92973 898 aaKnown RBP12.53□□□□□ -0.4
CAPN1-221ENST00000531068 TIFAQ96CG3 184 aa12.53□□□□□ -0.4
CAPN1-221ENST00000531068 FAM161BQ96MY7 647 aa12.53□□□□□ -0.4
CAPN1-221ENST00000531068 CTAGE1Q96RT6 745 aa12.53□□□□□ -0.4
CAPN1-221ENST00000531068 ANO3Q9BYT9 981 aa12.53□□□□□ -0.4
CAPN1-221ENST00000531068 UPF3BQ9BZI7 483 aaKnown RBP12.53□□□□□ -0.4
CAPN1-221ENST00000531068 ZMYND12Q9H0C1 365 aa12.53□□□□□ -0.4
CAPN1-221ENST00000531068 KCNH7Q9NS40 1196 aa12.53□□□□□ -0.4
CAPN1-221ENST00000531068 CXXC1Q9P0U4 656 aaPredicted RBP12.53□□□□□ -0.4
CAPN1-221ENST00000531068 NID2Q14112 1375 aa12.53□□□□□ -0.4
CAPN1-221ENST00000531068 MEIS1O00470 390 aa12.52□□□□□ -0.41
CAPN1-221ENST00000531068 SMIM10L2AP0DMW4 78 aa12.52□□□□□ -0.41
CAPN1-221ENST00000531068 SMIM10L2BP0DMW5 78 aa12.52□□□□□ -0.41
CAPN1-221ENST00000531068 CKBP12277 381 aa12.52□□□□□ -0.41
CAPN1-221ENST00000531068 KCNA2P16389 499 aa12.52□□□□□ -0.41
CAPN1-221ENST00000531068 ATP2A2P16615 1042 aaKnown RBP12.52□□□□□ -0.41
CAPN1-221ENST00000531068 TCF7P36402 384 aaPredicted RBP12.52□□□□□ -0.41
CAPN1-221ENST00000531068 NEK4P51957 841 aa12.52□□□□□ -0.41
CAPN1-221ENST00000531068 CCT2P78371 535 aaKnown RBP12.52□□□□□ -0.41
CAPN1-221ENST00000531068 ARHGAP4P98171 946 aa12.52□□□□□ -0.41
CAPN1-221ENST00000531068 SP4Q02446 784 aa12.52□□□□□ -0.41
CAPN1-221ENST00000531068 SSRP1Q08945 709 aaKnown RBP12.52□□□□□ -0.41
CAPN1-221ENST00000531068 TOB2Q14106 344 aaPredicted RBP12.52□□□□□ -0.41
CAPN1-221ENST00000531068 NTRK3Q16288 839 aa12.52□□□□□ -0.41
CAPN1-221ENST00000531068 PKN1Q16512 942 aa12.52□□□□□ -0.41
CAPN1-221ENST00000531068 LRRC8DQ7L1W4 858 aa12.52□□□□□ -0.41
CAPN1-221ENST00000531068 NIPA1Q7RTP0 329 aa12.52□□□□□ -0.41
CAPN1-221ENST00000531068 SERINC5Q86VE9 423 aa12.52□□□□□ -0.41
CAPN1-221ENST00000531068 PHOSPHO2Q8TCD6 241 aa12.52□□□□□ -0.41
CAPN1-221ENST00000531068 ATP6V0A1Q93050 837 aa12.52□□□□□ -0.41
CAPN1-221ENST00000531068 PHKBQ93100 1093 aa12.52□□□□□ -0.41
CAPN1-221ENST00000531068 CDX2Q99626 313 aaPredicted RBP12.52□□□□□ -0.41
CAPN1-221ENST00000531068 SDF4Q9BRK5 362 aa12.52□□□□□ -0.41
CAPN1-221ENST00000531068 SLC26A6Q9BXS9 759 aa12.52□□□□□ -0.41
CAPN1-221ENST00000531068 PBX4Q9BYU1 374 aa12.52□□□□□ -0.41
CAPN1-221ENST00000531068 RNPEPQ9H4A4 650 aa12.52□□□□□ -0.41
CAPN1-221ENST00000531068 SMARCAD1Q9H4L7 1026 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms