RNA–Protein interactions for RNA: ENST00000530818.1

PTPN11-203, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 3

Gene PTPN11, Length 486 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-203ENST00000530818 FAM90A27PA6NNH2 459 aa3.86□□□□□ -1.79
PTPN11-203ENST00000530818 TRAF5O00463 557 aa3.86□□□□□ -1.79
PTPN11-203ENST00000530818 MAN2B1O00754 1011 aa3.86□□□□□ -1.79
PTPN11-203ENST00000530818 KCNK3O14649 394 aa3.86□□□□□ -1.79
PTPN11-203ENST00000530818 TSPAN15O95858 294 aa3.86□□□□□ -1.79
PTPN11-203ENST00000530818 C8BP07358 591 aa3.86□□□□□ -1.79
PTPN11-203ENST00000530818 TMEM253P0C7T8 217 aa3.86□□□□□ -1.79
PTPN11-203ENST00000530818 ZBTB48P10074 688 aaPredicted RBP3.86□□□□□ -1.79
PTPN11-203ENST00000530818 NCAM1P13591 858 aa3.86□□□□□ -1.79
PTPN11-203ENST00000530818 YBX3P16989 372 aaKnown RBP eCLIP3.86□□□□□ -1.791e-6■■□□□ 13.8
PTPN11-203ENST00000530818 MECP2P51608 486 aaKnown RBP3.86□□□□□ -1.79
PTPN11-203ENST00000530818 EPHA5P54756 1037 aa3.86□□□□□ -1.79
PTPN11-203ENST00000530818 FOXO4P98177 505 aa3.86□□□□□ -1.79
PTPN11-203ENST00000530818 DLX2Q07687 328 aaPredicted RBP3.86□□□□□ -1.79
PTPN11-203ENST00000530818 TMEM62Q0P6H9 643 aa3.86□□□□□ -1.79
PTPN11-203ENST00000530818 RTP5Q14D33 572 aa3.86□□□□□ -1.79
PTPN11-203ENST00000530818 SDE2Q6IQ49 451 aa3.86□□□□□ -1.79
PTPN11-203ENST00000530818 ARHGAP36Q6ZRI8 547 aa3.86□□□□□ -1.79
PTPN11-203ENST00000530818 CABP7Q86V35 215 aa3.86□□□□□ -1.79
PTPN11-203ENST00000530818 FAM129CQ86XR2 697 aa3.86□□□□□ -1.79
PTPN11-203ENST00000530818 DCP2Q8IU60 420 aaKnown RBP3.86□□□□□ -1.79
PTPN11-203ENST00000530818 BHLHE22Q8NFJ8 381 aaPredicted RBP3.86□□□□□ -1.79
PTPN11-203ENST00000530818 CPA5Q8WXQ8 436 aa3.86□□□□□ -1.79
PTPN11-203ENST00000530818 FBXW5Q969U6 566 aa3.86□□□□□ -1.79
PTPN11-203ENST00000530818 NUDT5Q9UKK9 219 aa3.86□□□□□ -1.79
PTPN11-203ENST00000530818 COA3Q9Y2R0 106 aaPredicted RBP3.86□□□□□ -1.79
PTPN11-203ENST00000530818 ERCC6Q03468 1493 aa3.86□□□□□ -1.79
PTPN11-203ENST00000530818 SMARCA4P51532 1647 aa3.85□□□□□ -1.79
PTPN11-203ENST00000530818 A0A087X0B3 334 aa3.85□□□□□ -1.79
PTPN11-203ENST00000530818 KRTAP4-8A0A0G2JLE6 195 aa3.85□□□□□ -1.79
PTPN11-203ENST00000530818 CDC45O75419 566 aa3.85□□□□□ -1.79
PTPN11-203ENST00000530818 GNAT1P11488 350 aa3.85□□□□□ -1.79
PTPN11-203ENST00000530818 CFPP27918 469 aa3.85□□□□□ -1.79
PTPN11-203ENST00000530818 STAT5AP42229 794 aa3.85□□□□□ -1.79
PTPN11-203ENST00000530818 LIMS1P48059 325 aa3.85□□□□□ -1.79
PTPN11-203ENST00000530818 DNM2P50570 870 aa3.85□□□□□ -1.79
PTPN11-203ENST00000530818 GYS2P54840 703 aa3.85□□□□□ -1.79
PTPN11-203ENST00000530818 HTRA3P83110 453 aa3.85□□□□□ -1.79
PTPN11-203ENST00000530818 GRIN1Q05586 938 aa3.85□□□□□ -1.79
PTPN11-203ENST00000530818 CACNB2Q08289 660 aaPredicted RBP3.85□□□□□ -1.79
PTPN11-203ENST00000530818 TUSC3Q13454 348 aa3.85□□□□□ -1.79
PTPN11-203ENST00000530818 PCBP1Q15365 356 aaKnown RBP eCLIP3.85□□□□□ -1.79
PTPN11-203ENST00000530818 TCEA2Q15560 299 aa3.85□□□□□ -1.79
PTPN11-203ENST00000530818 EGFLAMQ63HQ2 1017 aa3.85□□□□□ -1.79
PTPN11-203ENST00000530818 STK32CQ86UX6 486 aa3.85□□□□□ -1.79
PTPN11-203ENST00000530818 AMIGO3Q86WK7 504 aa3.85□□□□□ -1.79
PTPN11-203ENST00000530818 PTRH1Q86Y79 214 aaKnown RBP3.85□□□□□ -1.79
PTPN11-203ENST00000530818 FAM126BQ8IXS8 530 aa3.85□□□□□ -1.79
PTPN11-203ENST00000530818 DHX37Q8IY37 1157 aaKnown RBP3.85□□□□□ -1.79
PTPN11-203ENST00000530818 IGSF22Q8N9C0 903 aa3.85□□□□□ -1.79
PTPN11-203ENST00000530818 SMARCC2Q8TAQ2 1214 aa3.85□□□□□ -1.79
PTPN11-203ENST00000530818 NINJ1Q92982 152 aa3.85□□□□□ -1.79
PTPN11-203ENST00000530818 DACT3Q96B18 629 aaPredicted RBP3.85□□□□□ -1.79
PTPN11-203ENST00000530818 DDX11Q96FC9 970 aa3.85□□□□□ -1.79
PTPN11-203ENST00000530818 ALG1Q9BT22 464 aa3.85□□□□□ -1.79
PTPN11-203ENST00000530818 CD244Q9BZW8 370 aa3.85□□□□□ -1.79
PTPN11-203ENST00000530818 AP5M1Q9H0R1 490 aa3.85□□□□□ -1.79
PTPN11-203ENST00000530818 CATSPERZQ9NTU4 200 aa3.85□□□□□ -1.79
PTPN11-203ENST00000530818 SPATA6Q9NWH7 488 aaPredicted RBP3.85□□□□□ -1.79
PTPN11-203ENST00000530818 MYOTQ9UBF9 498 aa3.85□□□□□ -1.79
PTPN11-203ENST00000530818 DSEQ9UL01 958 aa3.85□□□□□ -1.79
PTPN11-203ENST00000530818 PCDHB4Q9Y5E5 795 aa3.85□□□□□ -1.79
PTPN11-203ENST00000530818 SMARCA2P51531 1590 aa3.85□□□□□ -1.79
PTPN11-203ENST00000530818 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP3.84□□□□□ -1.79
PTPN11-203ENST00000530818 NPIPB6E9PJ23 425 aa3.84□□□□□ -1.79
PTPN11-203ENST00000530818 DVL2O14641 736 aa3.84□□□□□ -1.79
PTPN11-203ENST00000530818 SMARCA5O60264 1052 aaPredicted RBP3.84□□□□□ -1.79
PTPN11-203ENST00000530818 GLRX3O76003 335 aaKnown RBP3.84□□□□□ -1.79
PTPN11-203ENST00000530818 ASLP04424 464 aa3.84□□□□□ -1.79
PTPN11-203ENST00000530818 PI3P19957 117 aa3.84□□□□□ -1.79
PTPN11-203ENST00000530818 RAP1GAPP47736 663 aa3.84□□□□□ -1.79
PTPN11-203ENST00000530818 LINC00310P59036 64 aa3.84□□□□□ -1.79
PTPN11-203ENST00000530818 GPR19Q15760 415 aa3.84□□□□□ -1.79
PTPN11-203ENST00000530818 KCNA10Q16322 511 aa3.84□□□□□ -1.79
PTPN11-203ENST00000530818 CYP4F22Q6NT55 531 aa3.84□□□□□ -1.79
PTPN11-203ENST00000530818 ZCCHC8Q6NZY4 707 aaKnown RBP3.84□□□□□ -1.79
PTPN11-203ENST00000530818 TEPPQ6URK8 271 aa3.84□□□□□ -1.79
PTPN11-203ENST00000530818 B3GNT8Q7Z7M8 397 aa3.84□□□□□ -1.79
PTPN11-203ENST00000530818 ZC3H7AQ8IWR0 971 aaKnown RBP3.84□□□□□ -1.79
PTPN11-203ENST00000530818 SYNPOQ8N3V7 929 aa3.84□□□□□ -1.79
PTPN11-203ENST00000530818 TP53I13Q8NBR0 393 aaPredicted RBP3.84□□□□□ -1.79
PTPN11-203ENST00000530818 FNIP1Q8TF40 1166 aa3.84□□□□□ -1.79
PTPN11-203ENST00000530818 DDX1Q92499 740 aaKnown RBP3.84□□□□□ -1.79
PTPN11-203ENST00000530818 SIGLEC10Q96LC7 697 aa3.84□□□□□ -1.79
PTPN11-203ENST00000530818 GORASP1Q9BQQ3 440 aa3.84□□□□□ -1.79
PTPN11-203ENST00000530818 CELF4Q9BZC1 486 aaKnown RBP3.84□□□□□ -1.79
PTPN11-203ENST00000530818 RNF38Q9H0F5 515 aa3.84□□□□□ -1.79
PTPN11-203ENST00000530818 HSPBP1Q9NZL4 362 aa3.84□□□□□ -1.79
PTPN11-203ENST00000530818 SRPK3Q9UPE1 567 aa3.84□□□□□ -1.79
PTPN11-203ENST00000530818 KCTD3Q9Y597 815 aa3.84□□□□□ -1.79
PTPN11-203ENST00000530818 THOC2Q8NI27 1593 aaKnown RBP3.84□□□□□ -1.8
PTPN11-203ENST00000530818 WIZO95785 1651 aa3.84□□□□□ -1.8
PTPN11-203ENST00000530818 NFIBO00712 420 aa3.83□□□□□ -1.8
PTPN11-203ENST00000530818 FFAR3O14843 346 aa3.83□□□□□ -1.8
PTPN11-203ENST00000530818 C4BPAP04003 597 aaKnown RBP3.83□□□□□ -1.8
PTPN11-203ENST00000530818 JMJD7P0C870 316 aa3.83□□□□□ -1.8
PTPN11-203ENST00000530818 FAHP16930 419 aa3.83□□□□□ -1.8
PTPN11-203ENST00000530818 KRT15P19012 456 aa3.83□□□□□ -1.8
PTPN11-203ENST00000530818 POU3F2P20265 443 aaPredicted RBP3.83□□□□□ -1.8
PTPN11-203ENST00000530818 HSD3B2P26439 372 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms