RNA–Protein interactions for RNA: ENST00000530405.5

PACSIN3-206, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-206ENST00000530405 C11orf84Q9BUA3 381 aaPredicted RBP19.04■□□□□ 0.64
PACSIN3-206ENST00000530405 TUT1Q9H6E5 874 aaKnown RBP19.04■□□□□ 0.64
PACSIN3-206ENST00000530405 MAP3K20Q9NYL2 800 aaKnown RBP19.04■□□□□ 0.64
PACSIN3-206ENST00000530405 MUTYHQ9UIF7 546 aa19.04■□□□□ 0.64
PACSIN3-206ENST00000530405 TECTAO75443 2155 aa19.03■□□□□ 0.64
PACSIN3-206ENST00000530405 USP34Q70CQ2 3546 aa19.03■□□□□ 0.64
PACSIN3-206ENST00000530405 A0A0D9SFI3 127 aa19.03■□□□□ 0.64
PACSIN3-206ENST00000530405 TREHO43280 583 aa19.03■□□□□ 0.64
PACSIN3-206ENST00000530405 CTNNB1P35222 781 aa19.03■□□□□ 0.64
PACSIN3-206ENST00000530405 HYAL1Q12794 435 aa19.03■□□□□ 0.64
PACSIN3-206ENST00000530405 CCDC178Q5BJE1 867 aa19.03■□□□□ 0.64
PACSIN3-206ENST00000530405 STOX1Q6ZVD7 989 aa19.03■□□□□ 0.64
PACSIN3-206ENST00000530405 RNF135Q8IUD6 432 aa19.03■□□□□ 0.64
PACSIN3-206ENST00000530405 TBC1D10CQ8IV04 446 aa19.03■□□□□ 0.64
PACSIN3-206ENST00000530405 FIBCD1Q8N539 461 aa19.03■□□□□ 0.64
PACSIN3-206ENST00000530405 EDAQ92838 391 aa19.03■□□□□ 0.64
PACSIN3-206ENST00000530405 OSBPL7Q9BZF2 842 aa19.03■□□□□ 0.64
PACSIN3-206ENST00000530405 RWDD3Q9Y3V2 267 aa19.03■□□□□ 0.64
PACSIN3-206ENST00000530405 OPLAHO14841 1288 aa19.02■□□□□ 0.64
PACSIN3-206ENST00000530405 LINC00271P0C7V0 271 aa19.02■□□□□ 0.64
PACSIN3-206ENST00000530405 SMIM10L2AP0DMW4 78 aa19.02■□□□□ 0.64
PACSIN3-206ENST00000530405 SMIM10L2BP0DMW5 78 aa19.02■□□□□ 0.64
PACSIN3-206ENST00000530405 MYCLP12524 364 aaPredicted RBP19.02■□□□□ 0.64
PACSIN3-206ENST00000530405 UBA1P22314 1058 aaKnown RBP19.02■□□□□ 0.64
PACSIN3-206ENST00000530405 BMPR1AP36894 532 aa19.02■□□□□ 0.64
PACSIN3-206ENST00000530405 SP2Q02086 613 aa19.02■□□□□ 0.64
PACSIN3-206ENST00000530405 DLX2Q07687 328 aaPredicted RBP19.02■□□□□ 0.64
PACSIN3-206ENST00000530405 SMAD4Q13485 552 aaKnown RBP19.02■□□□□ 0.64
PACSIN3-206ENST00000530405 VSIG10LQ86VR7 867 aa19.02■□□□□ 0.64
PACSIN3-206ENST00000530405 IQCA1Q86XH1 822 aa19.02■□□□□ 0.64
PACSIN3-206ENST00000530405 RNPEPQ9H4A4 650 aa19.02■□□□□ 0.64
PACSIN3-206ENST00000530405 KAT14Q9H8E8 782 aa19.02■□□□□ 0.64
PACSIN3-206ENST00000530405 JMJD4Q9H9V9 463 aa19.02■□□□□ 0.64
PACSIN3-206ENST00000530405 NEDD4P46934 1319 aa19.01■□□□□ 0.63
PACSIN3-206ENST00000530405 GRM6O15303 877 aa19.01■□□□□ 0.63
PACSIN3-206ENST00000530405 DHX16O60231 1041 aaKnown RBP19.01■□□□□ 0.63
PACSIN3-206ENST00000530405 SORBS3O60504 671 aa19.01■□□□□ 0.63
PACSIN3-206ENST00000530405 CTSHP09668 335 aa19.01■□□□□ 0.63
PACSIN3-206ENST00000530405 CLUL1Q15846 466 aa19.01■□□□□ 0.63
PACSIN3-206ENST00000530405 PKN1Q16512 942 aa19.01■□□□□ 0.63
PACSIN3-206ENST00000530405 ZNF589Q86UQ0 364 aaPredicted RBP19.01■□□□□ 0.63
PACSIN3-206ENST00000530405 SAMD3Q8N6K7 520 aa19.01■□□□□ 0.63
PACSIN3-206ENST00000530405 PHOX2BQ99453 314 aa19.01■□□□□ 0.63
PACSIN3-206ENST00000530405 PRRX2Q99811 253 aa19.01■□□□□ 0.63
PACSIN3-206ENST00000530405 AMNQ9BXJ7 453 aa19.01■□□□□ 0.63
PACSIN3-206ENST00000530405 MLXIPQ9HAP2 919 aa19.01■□□□□ 0.63
PACSIN3-206ENST00000530405 STXBP3O00186 592 aa19■□□□□ 0.63
PACSIN3-206ENST00000530405 LGALS2P05162 132 aa19■□□□□ 0.63
PACSIN3-206ENST00000530405 GNAT1P11488 350 aa19■□□□□ 0.63
PACSIN3-206ENST00000530405 PTPN5P54829 565 aa19■□□□□ 0.63
PACSIN3-206ENST00000530405 PGM5Q15124 567 aa19■□□□□ 0.63
PACSIN3-206ENST00000530405 FAM26DQ5JW98 314 aa19■□□□□ 0.63
PACSIN3-206ENST00000530405 PRSS33Q8NF86 280 aa19■□□□□ 0.63
PACSIN3-206ENST00000530405 CLP1Q92989 425 aaKnown RBP19■□□□□ 0.63
PACSIN3-206ENST00000530405 VAT1LQ9HCJ6 419 aa19■□□□□ 0.63
PACSIN3-206ENST00000530405 CD207Q9UJ71 328 aa19■□□□□ 0.63
PACSIN3-206ENST00000530405 CCDC171Q6TFL3 1326 aa19■□□□□ 0.63
PACSIN3-206ENST00000530405 ST18O60284 1047 aa18.99■□□□□ 0.63
PACSIN3-206ENST00000530405 TBX10O75333 385 aa18.99■□□□□ 0.63
PACSIN3-206ENST00000530405 PARP1P09874 1014 aaKnown RBP18.99■□□□□ 0.63
PACSIN3-206ENST00000530405 USP26Q9BXU7 913 aa18.99■□□□□ 0.63
PACSIN3-206ENST00000530405 RC3H2Q9HBD1 1191 aaKnown RBP18.99■□□□□ 0.63
PACSIN3-206ENST00000530405 PCDHB15Q9Y5E8 787 aa18.99■□□□□ 0.63
PACSIN3-206ENST00000530405 ADGRA3Q8IWK6 1321 aa18.99■□□□□ 0.63
PACSIN3-206ENST00000530405 KDM4AO75164 1064 aa18.98■□□□□ 0.63
PACSIN3-206ENST00000530405 MMP1P03956 469 aa18.98■□□□□ 0.63
PACSIN3-206ENST00000530405 NMIQ13287 307 aaPredicted RBP18.98■□□□□ 0.63
PACSIN3-206ENST00000530405 ADAM15Q13444 863 aa18.98■□□□□ 0.63
PACSIN3-206ENST00000530405 TRIM67Q6ZTA4 783 aa18.98■□□□□ 0.63
PACSIN3-206ENST00000530405 IL31RAQ8NI17 732 aa18.98■□□□□ 0.63
PACSIN3-206ENST00000530405 ZSCAN10Q96SZ4 725 aaPredicted RBP18.98■□□□□ 0.63
PACSIN3-206ENST00000530405 PLVAPQ9BX97 442 aa18.98■□□□□ 0.63
PACSIN3-206ENST00000530405 SETD4Q9NVD3 440 aa18.98■□□□□ 0.63
PACSIN3-206ENST00000530405 CFAP54Q96N23 3096 aa18.97■□□□□ 0.63
PACSIN3-206ENST00000530405 TMEM221A6NGB7 291 aa18.97■□□□□ 0.63
PACSIN3-206ENST00000530405 M0R296 226 aa18.97■□□□□ 0.63
PACSIN3-206ENST00000530405 NOP56O00567 594 aaKnown RBP18.97■□□□□ 0.63
PACSIN3-206ENST00000530405 ZNF213O14771 459 aa18.97■□□□□ 0.63
PACSIN3-206ENST00000530405 EYA4O95677 639 aa18.97■□□□□ 0.63
PACSIN3-206ENST00000530405 CCND2P30279 289 aa18.97■□□□□ 0.63
PACSIN3-206ENST00000530405 GTF2F1P35269 517 aaKnown RBP eCLIP18.97■□□□□ 0.63
PACSIN3-206ENST00000530405 ADAM17P78536 824 aa18.97■□□□□ 0.63
PACSIN3-206ENST00000530405 IER5LQ5T953 404 aa18.97■□□□□ 0.63
PACSIN3-206ENST00000530405 ENAHQ8N8S7 591 aaPredicted RBP18.97■□□□□ 0.63
PACSIN3-206ENST00000530405 GPKOWQ92917 476 aaPredicted RBP eCLIP18.97■□□□□ 0.63
PACSIN3-206ENST00000530405 PBXIP1Q96AQ6 731 aa18.97■□□□□ 0.63
PACSIN3-206ENST00000530405 IGFLR1Q9H665 355 aa18.97■□□□□ 0.63
PACSIN3-206ENST00000530405 LAMA4Q16363 1823 aa18.97■□□□□ 0.63
PACSIN3-206ENST00000530405 HOXA13P31271 388 aaPredicted RBP18.96■□□□□ 0.63
PACSIN3-206ENST00000530405 PDE1AP54750 535 aa18.96■□□□□ 0.63
PACSIN3-206ENST00000530405 MFAP1P55081 439 aaKnown RBP18.96■□□□□ 0.63
PACSIN3-206ENST00000530405 ZNF689Q96CS4 500 aaPredicted RBP18.96■□□□□ 0.63
PACSIN3-206ENST00000530405 MTMR8Q96EF0 704 aa18.96■□□□□ 0.63
PACSIN3-206ENST00000530405 MSLNLQ96KJ4 702 aa18.96■□□□□ 0.63
PACSIN3-206ENST00000530405 BCAS3Q9H6U6 928 aa18.96■□□□□ 0.63
PACSIN3-206ENST00000530405 EHMT1Q9H9B1 1298 aa18.96■□□□□ 0.63
PACSIN3-206ENST00000530405 ZBTB47Q9UFB7 747 aaPredicted RBP18.96■□□□□ 0.63
PACSIN3-206ENST00000530405 PCDHA1Q9Y5I3 950 aa18.96■□□□□ 0.63
PACSIN3-206ENST00000530405 TRIM6-TRIM34B2RNG4 842 aa18.95■□□□□ 0.62
PACSIN3-206ENST00000530405 ZBTB5O15062 677 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms