RNA–Protein interactions for RNA: ENST00000529714.5

SMCO4-205, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 3

Gene SMCO4, Length 355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-205ENST00000529714 TNFAIP2Q03169 654 aa15.41■□□□□ 0.06
SMCO4-205ENST00000529714 CEBPZQ03701 1054 aaKnown RBP15.41■□□□□ 0.06
SMCO4-205ENST00000529714 TRIM32Q13049 653 aa15.41■□□□□ 0.06
SMCO4-205ENST00000529714 ITGB3BPQ13352 177 aaPredicted RBP15.41■□□□□ 0.06
SMCO4-205ENST00000529714 LEO1Q8WVC0 666 aaPredicted RBP15.41■□□□□ 0.06
SMCO4-205ENST00000529714 EMID1Q96A84 441 aaPredicted RBP15.41■□□□□ 0.06
SMCO4-205ENST00000529714 TEKT3Q9BXF9 490 aa15.41■□□□□ 0.06
SMCO4-205ENST00000529714 PCDHA12Q9UN75 941 aa15.41■□□□□ 0.06
SMCO4-205ENST00000529714 Q9Y3F1 56 aa15.41■□□□□ 0.06
SMCO4-205ENST00000529714 MSCO60682 206 aa15.4■□□□□ 0.06
SMCO4-205ENST00000529714 SMPD1P17405 629 aa15.4■□□□□ 0.06
SMCO4-205ENST00000529714 FXR2P51116 673 aaKnown RBP eCLIP15.4■□□□□ 0.06
SMCO4-205ENST00000529714 PPP2R5CQ13362 524 aa15.4■□□□□ 0.06
SMCO4-205ENST00000529714 LAMC2Q13753 1193 aa15.4■□□□□ 0.06
SMCO4-205ENST00000529714 CSPP1Q1MSJ5 1256 aa15.4■□□□□ 0.06
SMCO4-205ENST00000529714 TMEM266Q2M3C6 531 aa15.4■□□□□ 0.06
SMCO4-205ENST00000529714 CELF3Q5SZQ8 465 aaKnown RBP15.4■□□□□ 0.06
SMCO4-205ENST00000529714 METTL7BQ6UX53 244 aa15.4■□□□□ 0.06
SMCO4-205ENST00000529714 B3GNT9Q6UX72 402 aa15.4■□□□□ 0.06
SMCO4-205ENST00000529714 DTHD1Q6ZMT9 781 aa15.4■□□□□ 0.06
SMCO4-205ENST00000529714 SPATA32Q96LK8 384 aa15.4■□□□□ 0.06
SMCO4-205ENST00000529714 RAB34Q9BZG1 259 aa15.4■□□□□ 0.06
SMCO4-205ENST00000529714 TTC12Q9H892 705 aaPredicted RBP15.4■□□□□ 0.06
SMCO4-205ENST00000529714 JPH1Q9HDC5 661 aaPredicted RBP15.4■□□□□ 0.06
SMCO4-205ENST00000529714 HMX1Q9NP08 348 aaPredicted RBP15.4■□□□□ 0.06
SMCO4-205ENST00000529714 TCEAL9Q9UHQ7 104 aa15.4■□□□□ 0.06
SMCO4-205ENST00000529714 VAV3Q9UKW4 847 aa15.4■□□□□ 0.06
SMCO4-205ENST00000529714 GNEQ9Y223 722 aaKnown RBP15.4■□□□□ 0.06
SMCO4-205ENST00000529714 SRPRBQ9Y5M8 271 aaKnown RBP15.4■□□□□ 0.06
SMCO4-205ENST00000529714 ELP1O95163 1332 aa15.4■□□□□ 0.06
SMCO4-205ENST00000529714 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.39■□□□□ 0.05
SMCO4-205ENST00000529714 DUSP11O75319 330 aaKnown RBP15.39■□□□□ 0.05
SMCO4-205ENST00000529714 FARP2O94887 1054 aaPredicted RBP15.39■□□□□ 0.05
SMCO4-205ENST00000529714 GGPS1O95749 300 aa15.39■□□□□ 0.05
SMCO4-205ENST00000529714 GH1P01241 217 aa15.39■□□□□ 0.05
SMCO4-205ENST00000529714 TXKP42681 527 aa15.39■□□□□ 0.05
SMCO4-205ENST00000529714 KRT76Q01546 638 aa15.39■□□□□ 0.05
SMCO4-205ENST00000529714 ARHGAP1Q07960 439 aa15.39■□□□□ 0.05
SMCO4-205ENST00000529714 SPIRE1Q08AE8 756 aa15.39■□□□□ 0.05
SMCO4-205ENST00000529714 PDIA5Q14554 519 aa15.39■□□□□ 0.05
SMCO4-205ENST00000529714 LY6KQ17RY6 165 aa15.39■□□□□ 0.05
SMCO4-205ENST00000529714 ZNF746Q6NUN9 644 aaPredicted RBP15.39■□□□□ 0.05
SMCO4-205ENST00000529714 DHX37Q8IY37 1157 aaKnown RBP15.39■□□□□ 0.05
SMCO4-205ENST00000529714 IGSF22Q8N9C0 903 aa15.39■□□□□ 0.05
SMCO4-205ENST00000529714 KRI1Q8N9T8 703 aaKnown RBP15.39■□□□□ 0.05
SMCO4-205ENST00000529714 RDM1Q8NG50 284 aa15.39■□□□□ 0.05
SMCO4-205ENST00000529714 SH3TC2Q8TF17 1288 aa15.39■□□□□ 0.05
SMCO4-205ENST00000529714 ARMC5Q96C12 935 aa15.39■□□□□ 0.05
SMCO4-205ENST00000529714 CHAMP1Q96JM3 812 aa15.39■□□□□ 0.05
SMCO4-205ENST00000529714 GBP4Q96PP9 640 aa15.39■□□□□ 0.05
SMCO4-205ENST00000529714 PKD2L1Q9P0L9 805 aa15.39■□□□□ 0.05
SMCO4-205ENST00000529714 SLC9A2Q9UBY0 812 aa15.39■□□□□ 0.05
SMCO4-205ENST00000529714 FBXO2Q9UK22 296 aaPredicted RBP15.39■□□□□ 0.05
SMCO4-205ENST00000529714 DOCK5Q9H7D0 1870 aa15.39■□□□□ 0.05
SMCO4-205ENST00000529714 ADCY6O43306 1168 aa15.38■□□□□ 0.05
SMCO4-205ENST00000529714 MARCKSP29966 332 aaPredicted RBP15.38■□□□□ 0.05
SMCO4-205ENST00000529714 CCND3P30281 292 aaPredicted RBP15.38■□□□□ 0.05
SMCO4-205ENST00000529714 SFNP31947 248 aa15.38■□□□□ 0.05
SMCO4-205ENST00000529714 LONP1P36776 959 aaKnown RBP15.38■□□□□ 0.05
SMCO4-205ENST00000529714 NKX3-2P78367 333 aa15.38■□□□□ 0.05
SMCO4-205ENST00000529714 CYFIP1Q7L576 1253 aa15.38■□□□□ 0.05
SMCO4-205ENST00000529714 SMAP1Q8IYB5 467 aaPredicted RBP15.38■□□□□ 0.05
SMCO4-205ENST00000529714 TMEM87AQ8NBN3 555 aa15.38■□□□□ 0.05
SMCO4-205ENST00000529714 AK8Q96MA6 479 aa15.38■□□□□ 0.05
SMCO4-205ENST00000529714 MLXIPQ9HAP2 919 aa15.38■□□□□ 0.05
SMCO4-205ENST00000529714 DDX20Q9UHI6 824 aaKnown RBP15.38■□□□□ 0.05
SMCO4-205ENST00000529714 STK24Q9Y6E0 443 aa15.38■□□□□ 0.05
SMCO4-205ENST00000529714 VWA3AA6NCI4 1184 aa15.37■□□□□ 0.05
SMCO4-205ENST00000529714 CUTAO60888 179 aa15.37■□□□□ 0.05
SMCO4-205ENST00000529714 RARBP10826 455 aa15.37■□□□□ 0.05
SMCO4-205ENST00000529714 CNGA1P29973 690 aa15.37■□□□□ 0.05
SMCO4-205ENST00000529714 ME1P48163 572 aa15.37■□□□□ 0.05
SMCO4-205ENST00000529714 JAK3P52333 1124 aa15.37■□□□□ 0.05
SMCO4-205ENST00000529714 IL17AQ16552 155 aa15.37■□□□□ 0.05
SMCO4-205ENST00000529714 TMEM63BQ5T3F8 832 aa15.37■□□□□ 0.05
SMCO4-205ENST00000529714 TLK2Q86UE8 772 aa15.37■□□□□ 0.05
SMCO4-205ENST00000529714 ZNF579Q8NAF0 562 aaKnown RBP15.37■□□□□ 0.05
SMCO4-205ENST00000529714 PPTC7Q8NI37 304 aa15.37■□□□□ 0.05
SMCO4-205ENST00000529714 GJA10Q969M2 543 aa15.37■□□□□ 0.05
SMCO4-205ENST00000529714 XRN2Q9H0D6 950 aaKnown RBP eCLIP15.37■□□□□ 0.05
SMCO4-205ENST00000529714 UPF3AQ9H1J1 476 aaKnown RBP15.37■□□□□ 0.05
SMCO4-205ENST00000529714 UNC45AQ9H3U1 944 aa15.37■□□□□ 0.05
SMCO4-205ENST00000529714 FRMPD3Q5JV73 1810 aa15.36■□□□□ 0.05
SMCO4-205ENST00000529714 WDR64B1ANS9 1081 aa15.36■□□□□ 0.05
SMCO4-205ENST00000529714 ATG7O95352 703 aa15.36■□□□□ 0.05
SMCO4-205ENST00000529714 CCNE2O96020 404 aa15.36■□□□□ 0.05
SMCO4-205ENST00000529714 TECP42680 631 aa15.36■□□□□ 0.05
SMCO4-205ENST00000529714 GJA9P57773 515 aa15.36■□□□□ 0.05
SMCO4-205ENST00000529714 ACTR2P61160 394 aa15.36■□□□□ 0.05
SMCO4-205ENST00000529714 OR6J1Q8NGC5 347 aa15.36■□□□□ 0.05
SMCO4-205ENST00000529714 COPS5Q92905 334 aa15.36■□□□□ 0.05
SMCO4-205ENST00000529714 ZNF333Q96JL9 665 aa15.36■□□□□ 0.05
SMCO4-205ENST00000529714 SPATA33Q96N06 139 aa15.36■□□□□ 0.05
SMCO4-205ENST00000529714 UIMC1Q96RL1 719 aa15.36■□□□□ 0.05
SMCO4-205ENST00000529714 AP5M1Q9H0R1 490 aa15.36■□□□□ 0.05
SMCO4-205ENST00000529714 BCAS3Q9H6U6 928 aa15.36■□□□□ 0.05
SMCO4-205ENST00000529714 SPC25Q9HBM1 224 aa15.36■□□□□ 0.05
SMCO4-205ENST00000529714 PAK6Q9NQU5 681 aaPredicted RBP15.36■□□□□ 0.05
SMCO4-205ENST00000529714 PCDHA7Q9UN72 937 aa15.36■□□□□ 0.05
SMCO4-205ENST00000529714 CENPFP49454 3210 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms