RNA–Protein interactions for RNA: ENST00000529446.5

C9orf135-207, Transcript of chromosome 9 open reading frame 135, humanhuman

TSL 1 (best)

Gene C9orf135, Length 697 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-207ENST00000529446 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.28□□□□□ -0.28
C9orf135-207ENST00000529446 AP5M1Q9H0R1 490 aa13.28□□□□□ -0.28
C9orf135-207ENST00000529446 JPH1Q9HDC5 661 aaPredicted RBP13.28□□□□□ -0.28
C9orf135-207ENST00000529446 PAK6Q9NQU5 681 aaPredicted RBP13.28□□□□□ -0.28
C9orf135-207ENST00000529446 DDX20Q9UHI6 824 aaKnown RBP13.28□□□□□ -0.28
C9orf135-207ENST00000529446 GNEQ9Y223 722 aaKnown RBP13.28□□□□□ -0.28
C9orf135-207ENST00000529446 KIAA1217Q5T5P2 1943 aa13.28□□□□□ -0.28
C9orf135-207ENST00000529446 DHX15O43143 795 aaKnown RBP13.27□□□□□ -0.29
C9orf135-207ENST00000529446 ATP9AO75110 1047 aa13.27□□□□□ -0.29
C9orf135-207ENST00000529446 PSMD10O75832 226 aa13.27□□□□□ -0.29
C9orf135-207ENST00000529446 ARIH2O95376 493 aa13.27□□□□□ -0.29
C9orf135-207ENST00000529446 GGPS1O95749 300 aa13.27□□□□□ -0.29
C9orf135-207ENST00000529446 CCL5P13501 91 aa13.27□□□□□ -0.29
C9orf135-207ENST00000529446 GJA9P57773 515 aa13.27□□□□□ -0.29
C9orf135-207ENST00000529446 SP2Q02086 613 aa13.27□□□□□ -0.29
C9orf135-207ENST00000529446 ARHGAP1Q07960 439 aa13.27□□□□□ -0.29
C9orf135-207ENST00000529446 ITGB3BPQ13352 177 aaPredicted RBP13.27□□□□□ -0.29
C9orf135-207ENST00000529446 NBR1Q14596 966 aa13.27□□□□□ -0.29
C9orf135-207ENST00000529446 SLC39A14Q15043 492 aa13.27□□□□□ -0.29
C9orf135-207ENST00000529446 LY6KQ17RY6 165 aa13.27□□□□□ -0.29
C9orf135-207ENST00000529446 DTHD1Q6ZMT9 781 aa13.27□□□□□ -0.29
C9orf135-207ENST00000529446 SMAP1Q8IYB5 467 aaPredicted RBP13.27□□□□□ -0.29
C9orf135-207ENST00000529446 RDM1Q8NG50 284 aa13.27□□□□□ -0.29
C9orf135-207ENST00000529446 OR6J1Q8NGC5 347 aa13.27□□□□□ -0.29
C9orf135-207ENST00000529446 KCNG4Q8TDN1 519 aa13.27□□□□□ -0.29
C9orf135-207ENST00000529446 HAS1Q92839 578 aa13.27□□□□□ -0.29
C9orf135-207ENST00000529446 FERMT2Q96AC1 680 aa13.27□□□□□ -0.29
C9orf135-207ENST00000529446 USP28Q96RU2 1077 aa13.27□□□□□ -0.29
C9orf135-207ENST00000529446 SCAND2PQ9GZW5 306 aaPredicted RBP13.27□□□□□ -0.29
C9orf135-207ENST00000529446 UPF3AQ9H1J1 476 aaKnown RBP13.27□□□□□ -0.29
C9orf135-207ENST00000529446 MLXIPQ9HAP2 919 aa13.27□□□□□ -0.29
C9orf135-207ENST00000529446 PCDHA12Q9UN75 941 aa13.27□□□□□ -0.29
C9orf135-207ENST00000529446 STK24Q9Y6E0 443 aa13.27□□□□□ -0.29
C9orf135-207ENST00000529446 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.26□□□□□ -0.29
C9orf135-207ENST00000529446 MCM3APO60318 1980 aa13.26□□□□□ -0.29
C9orf135-207ENST00000529446 FARP2O94887 1054 aaPredicted RBP13.26□□□□□ -0.29
C9orf135-207ENST00000529446 SFNP31947 248 aa13.26□□□□□ -0.29
C9orf135-207ENST00000529446 CPT1AP50416 773 aa13.26□□□□□ -0.29
C9orf135-207ENST00000529446 FXR2P51116 673 aaKnown RBP eCLIP13.26□□□□□ -0.29
C9orf135-207ENST00000529446 JAK3P52333 1124 aa13.26□□□□□ -0.29
C9orf135-207ENST00000529446 DNM1Q05193 864 aaKnown RBP13.26□□□□□ -0.29
C9orf135-207ENST00000529446 PPP2R5CQ13362 524 aa13.26□□□□□ -0.29
C9orf135-207ENST00000529446 PDIA5Q14554 519 aa13.26□□□□□ -0.29
C9orf135-207ENST00000529446 STK38Q15208 465 aa13.26□□□□□ -0.29
C9orf135-207ENST00000529446 PTPAQ15257 358 aa13.26□□□□□ -0.29
C9orf135-207ENST00000529446 CYFIP1Q7L576 1253 aa13.26□□□□□ -0.29
C9orf135-207ENST00000529446 TLK2Q86UE8 772 aa13.26□□□□□ -0.29
C9orf135-207ENST00000529446 LINC00301Q8NCQ3 95 aa13.26□□□□□ -0.29
C9orf135-207ENST00000529446 PPTC7Q8NI37 304 aa13.26□□□□□ -0.29
C9orf135-207ENST00000529446 TMEM60Q9H2L4 133 aa13.26□□□□□ -0.29
C9orf135-207ENST00000529446 XPNPEP3Q9NQH7 507 aa13.26□□□□□ -0.29
C9orf135-207ENST00000529446 SLC9A2Q9UBY0 812 aa13.26□□□□□ -0.29
C9orf135-207ENST00000529446 CLIC4Q9Y696 253 aa13.26□□□□□ -0.29
C9orf135-207ENST00000529446 ELP1O95163 1332 aa13.25□□□□□ -0.29
C9orf135-207ENST00000529446 A6NJR5 290 aa13.25□□□□□ -0.29
C9orf135-207ENST00000529446 WDR64B1ANS9 1081 aa13.25□□□□□ -0.29
C9orf135-207ENST00000529446 NOP56O00567 594 aaKnown RBP13.25□□□□□ -0.29
C9orf135-207ENST00000529446 KPNA6O60684 536 aa13.25□□□□□ -0.29
C9orf135-207ENST00000529446 PPP6R2O75170 966 aa13.25□□□□□ -0.29
C9orf135-207ENST00000529446 PPFIA4O75335 1185 aa13.25□□□□□ -0.29
C9orf135-207ENST00000529446 GJB1P08034 283 aa13.25□□□□□ -0.29
C9orf135-207ENST00000529446 CST5P28325 142 aaPredicted RBP13.25□□□□□ -0.29
C9orf135-207ENST00000529446 TXKP42681 527 aa13.25□□□□□ -0.29
C9orf135-207ENST00000529446 CSPP1Q1MSJ5 1256 aa13.25□□□□□ -0.29
C9orf135-207ENST00000529446 LHX8Q68G74 356 aa13.25□□□□□ -0.29
C9orf135-207ENST00000529446 B3GNT9Q6UX72 402 aa13.25□□□□□ -0.29
C9orf135-207ENST00000529446 RNF180Q86T96 592 aa13.25□□□□□ -0.29
C9orf135-207ENST00000529446 ARRDC4Q8NCT1 418 aa13.25□□□□□ -0.29
C9orf135-207ENST00000529446 AK8Q96MA6 479 aa13.25□□□□□ -0.29
C9orf135-207ENST00000529446 SPATA33Q96N06 139 aa13.25□□□□□ -0.29
C9orf135-207ENST00000529446 RNF208Q9H0X6 261 aa13.25□□□□□ -0.29
C9orf135-207ENST00000529446 UNC93B1Q9H1C4 597 aa13.25□□□□□ -0.29
C9orf135-207ENST00000529446 TTC12Q9H892 705 aaPredicted RBP13.25□□□□□ -0.29
C9orf135-207ENST00000529446 PKD2L1Q9P0L9 805 aa13.25□□□□□ -0.29
C9orf135-207ENST00000529446 TFIP11Q9UBB9 837 aaKnown RBP13.25□□□□□ -0.29
C9orf135-207ENST00000529446 RCOR1Q9UKL0 485 aa13.25□□□□□ -0.29
C9orf135-207ENST00000529446 VAV3Q9UKW4 847 aa13.25□□□□□ -0.29
C9orf135-207ENST00000529446 SRPRBQ9Y5M8 271 aaKnown RBP13.25□□□□□ -0.29
C9orf135-207ENST00000529446 MYH15Q9Y2K3 1946 aa13.25□□□□□ -0.29
C9orf135-207ENST00000529446 SYNRGQ9UMZ2 1314 aa13.24□□□□□ -0.29
C9orf135-207ENST00000529446 SPTLC2O15270 562 aa13.24□□□□□ -0.29
C9orf135-207ENST00000529446 DYNC1LI2O43237 492 aaPredicted RBP13.24□□□□□ -0.29
C9orf135-207ENST00000529446 ADCY6O43306 1168 aa13.24□□□□□ -0.29
C9orf135-207ENST00000529446 ZEB2O60315 1214 aa13.24□□□□□ -0.29
C9orf135-207ENST00000529446 ATG7O95352 703 aa13.24□□□□□ -0.29
C9orf135-207ENST00000529446 HOXD8P13378 290 aaPredicted RBP13.24□□□□□ -0.29
C9orf135-207ENST00000529446 NCLP19338 710 aaKnown RBP13.24□□□□□ -0.29
C9orf135-207ENST00000529446 HOXD11P31277 338 aaPredicted RBP13.24□□□□□ -0.29
C9orf135-207ENST00000529446 LONP1P36776 959 aaKnown RBP13.24□□□□□ -0.29
C9orf135-207ENST00000529446 MTFR1Q15390 333 aa13.24□□□□□ -0.29
C9orf135-207ENST00000529446 FOXD4L6Q3SYB3 417 aaPredicted RBP13.24□□□□□ -0.29
C9orf135-207ENST00000529446 FOXD4L3Q6VB84 417 aaPredicted RBP13.24□□□□□ -0.29
C9orf135-207ENST00000529446 IGSF22Q8N9C0 903 aa13.24□□□□□ -0.29
C9orf135-207ENST00000529446 SEPT1Q8WYJ6 367 aa13.24□□□□□ -0.29
C9orf135-207ENST00000529446 SLC26A4O43511 780 aa13.23□□□□□ -0.29
C9orf135-207ENST00000529446 ADAMTS4O75173 837 aa13.23□□□□□ -0.29
C9orf135-207ENST00000529446 PSAPP07602 524 aa13.23□□□□□ -0.29
C9orf135-207ENST00000529446 SLC26A2P50443 739 aa13.23□□□□□ -0.29
C9orf135-207ENST00000529446 ACTR2P61160 394 aa13.23□□□□□ -0.29
C9orf135-207ENST00000529446 CEBPZQ03701 1054 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms