RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 PFKLP17858 780 aa6.93□□□□□ -1.3
CSDE1-212ENST00000529046 AFF3P51826 1226 aaKnown RBP6.93□□□□□ -1.3
CSDE1-212ENST00000529046 KCNAB2Q13303 367 aa6.93□□□□□ -1.3
CSDE1-212ENST00000529046 PLEKHG4Q58EX7 1191 aa6.93□□□□□ -1.3
CSDE1-212ENST00000529046 STYK1Q6J9G0 422 aa6.93□□□□□ -1.3
CSDE1-212ENST00000529046 CNKSR3Q6P9H4 555 aa6.93□□□□□ -1.3
CSDE1-212ENST00000529046 GSTCDQ8NEC7 633 aa6.93□□□□□ -1.3
CSDE1-212ENST00000529046 EPB41L4AQ9HCS5 686 aaPredicted RBP6.93□□□□□ -1.3
CSDE1-212ENST00000529046 PCF11O94913 1555 aaKnown RBP6.93□□□□□ -1.3
CSDE1-212ENST00000529046 YEATS2Q9ULM3 1422 aa6.93□□□□□ -1.3
CSDE1-212ENST00000529046 LMTK3Q96Q04 1460 aa6.92□□□□□ -1.3
CSDE1-212ENST00000529046 ESYT3A0FGR9 886 aa6.92□□□□□ -1.3
CSDE1-212ENST00000529046 PRR5P85299 388 aa6.92□□□□□ -1.3
CSDE1-212ENST00000529046 SDE2Q6IQ49 451 aa6.92□□□□□ -1.3
CSDE1-212ENST00000529046 KIAA0907Q7Z7F0 614 aaPredicted RBP6.92□□□□□ -1.3
CSDE1-212ENST00000529046 FAM129CQ86XR2 697 aa6.92□□□□□ -1.3
CSDE1-212ENST00000529046 FBXO41Q8TF61 875 aa6.92□□□□□ -1.3
CSDE1-212ENST00000529046 DCAF4Q8WV16 495 aa6.92□□□□□ -1.3
CSDE1-212ENST00000529046 DACT3Q96B18 629 aaPredicted RBP6.92□□□□□ -1.3
CSDE1-212ENST00000529046 ZFYVE21Q9BQ24 234 aa6.92□□□□□ -1.3
CSDE1-212ENST00000529046 MRPL4Q9BYD3 311 aaKnown RBP6.92□□□□□ -1.3
CSDE1-212ENST00000529046 NCOA5Q9HCD5 579 aaKnown RBP6.92□□□□□ -1.3
CSDE1-212ENST00000529046 GPR27Q9NS67 375 aa6.92□□□□□ -1.3
CSDE1-212ENST00000529046 IRS2Q9Y4H2 1338 aa6.92□□□□□ -1.3
CSDE1-212ENST00000529046 C9orf84Q5VXU9 1444 aa6.92□□□□□ -1.3
CSDE1-212ENST00000529046 CASKIN1Q8WXD9 1431 aa6.92□□□□□ -1.3
CSDE1-212ENST00000529046 CCDC18Q5T9S5 1454 aa6.92□□□□□ -1.3
CSDE1-212ENST00000529046 MLH3Q9UHC1 1453 aa6.92□□□□□ -1.3
CSDE1-212ENST00000529046 MADDQ8WXG6 1647 aa6.91□□□□□ -1.3
CSDE1-212ENST00000529046 C7orf72A4D263 438 aa6.91□□□□□ -1.3
CSDE1-212ENST00000529046 RFPL3O75679 317 aa6.91□□□□□ -1.3
CSDE1-212ENST00000529046 INHBBP09529 407 aa6.91□□□□□ -1.3
CSDE1-212ENST00000529046 LTBRP36941 435 aa6.91□□□□□ -1.3
CSDE1-212ENST00000529046 ECI1P42126 302 aa6.91□□□□□ -1.3
CSDE1-212ENST00000529046 TARBP2Q15633 366 aaKnown RBP6.91□□□□□ -1.3
CSDE1-212ENST00000529046 INF2Q27J81 1249 aa6.91□□□□□ -1.3
CSDE1-212ENST00000529046 PPIL6Q8IXY8 311 aa6.91□□□□□ -1.3
CSDE1-212ENST00000529046 NETO2Q8NC67 525 aa6.91□□□□□ -1.3
CSDE1-212ENST00000529046 USP33Q8TEY7 942 aa6.91□□□□□ -1.3
CSDE1-212ENST00000529046 CDC6Q99741 560 aa6.91□□□□□ -1.3
CSDE1-212ENST00000529046 MTA3Q9BTC8 594 aa6.91□□□□□ -1.3
CSDE1-212ENST00000529046 CDIP1Q9H305 208 aa6.91□□□□□ -1.3
CSDE1-212ENST00000529046 FBLN5Q9UBX5 448 aa6.91□□□□□ -1.3
CSDE1-212ENST00000529046 NUDT5Q9UKK9 219 aa6.91□□□□□ -1.3
CSDE1-212ENST00000529046 ARHGEF12Q9NZN5 1544 aa6.91□□□□□ -1.3
CSDE1-212ENST00000529046 KDM5CP41229 1560 aa6.91□□□□□ -1.3
CSDE1-212ENST00000529046 REREQ9P2R6 1566 aa6.91□□□□□ -1.3
CSDE1-212ENST00000529046 KIF14Q15058 1648 aa6.9□□□□□ -1.3
CSDE1-212ENST00000529046 MEFVO15553 781 aaPredicted RBP6.9□□□□□ -1.3
CSDE1-212ENST00000529046 PPP1R11O60927 126 aaPredicted RBP6.9□□□□□ -1.3
CSDE1-212ENST00000529046 BMP7P18075 431 aa6.9□□□□□ -1.3
CSDE1-212ENST00000529046 HSD3B2P26439 372 aa6.9□□□□□ -1.3
CSDE1-212ENST00000529046 KCNJ6P48051 423 aa6.9□□□□□ -1.3
CSDE1-212ENST00000529046 GABREP78334 506 aa6.9□□□□□ -1.3
CSDE1-212ENST00000529046 LCE4AQ5TA78 99 aa6.9□□□□□ -1.3
CSDE1-212ENST00000529046 TTLL10Q6ZVT0 673 aa6.9□□□□□ -1.3
CSDE1-212ENST00000529046 C16orf86Q6ZW13 317 aa6.9□□□□□ -1.3
CSDE1-212ENST00000529046 MAMDC2Q7Z304 686 aaPredicted RBP6.9□□□□□ -1.3
CSDE1-212ENST00000529046 HOMER1Q86YM7 354 aa6.9□□□□□ -1.3
CSDE1-212ENST00000529046 RCBTB1Q8NDN9 531 aa6.9□□□□□ -1.3
CSDE1-212ENST00000529046 APPBP2Q92624 585 aa6.9□□□□□ -1.3
CSDE1-212ENST00000529046 ALG3Q92685 438 aa6.9□□□□□ -1.3
CSDE1-212ENST00000529046 DPF3Q92784 378 aa6.9□□□□□ -1.3
CSDE1-212ENST00000529046 DIO2Q92813 273 aa6.9□□□□□ -1.3
CSDE1-212ENST00000529046 PTPRN2Q92932 1015 aa6.9□□□□□ -1.3
CSDE1-212ENST00000529046 RXFP1Q9HBX9 757 aa6.9□□□□□ -1.3
CSDE1-212ENST00000529046 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.9□□□□□ -1.35e-7■■■■□ 24.3
CSDE1-212ENST00000529046 PLA2G2DQ9UNK4 145 aa6.9□□□□□ -1.3
CSDE1-212ENST00000529046 MYO5CQ9NQX4 1742 aa6.9□□□□□ -1.31
CSDE1-212ENST00000529046 PLD2O14939 933 aa6.89□□□□□ -1.31
CSDE1-212ENST00000529046 FBLN1P23142 703 aa6.89□□□□□ -1.31
CSDE1-212ENST00000529046 IGFBP6P24592 240 aaPredicted RBP6.89□□□□□ -1.31
CSDE1-212ENST00000529046 LIMS1P48059 325 aa6.89□□□□□ -1.31
CSDE1-212ENST00000529046 FNDC3BQ53EP0 1204 aaKnown RBP6.89□□□□□ -1.31
CSDE1-212ENST00000529046 WWC2Q6AWC2 1192 aa6.89□□□□□ -1.31
CSDE1-212ENST00000529046 AFAP1Q8N556 730 aa6.89□□□□□ -1.31
CSDE1-212ENST00000529046 TSPAN17Q96FV3 270 aa6.89□□□□□ -1.31
CSDE1-212ENST00000529046 PEX11GQ96HA9 241 aa6.89□□□□□ -1.31
CSDE1-212ENST00000529046 PWWP2AQ96N64 755 aa6.89□□□□□ -1.31
CSDE1-212ENST00000529046 RNF38Q9H0F5 515 aa6.89□□□□□ -1.31
CSDE1-212ENST00000529046 ZCCHC4Q9H5U6 513 aa6.89□□□□□ -1.31
CSDE1-212ENST00000529046 FANCLQ9NW38 375 aa6.89□□□□□ -1.31
CSDE1-212ENST00000529046 RAPGEFL1Q9UHV5 662 aa6.89□□□□□ -1.31
CSDE1-212ENST00000529046 AGLP35573 1532 aa6.89□□□□□ -1.31
CSDE1-212ENST00000529046 FYCO1Q9BQS8 1478 aa6.88□□□□□ -1.31
CSDE1-212ENST00000529046 WNT9AO14904 365 aa6.88□□□□□ -1.31
CSDE1-212ENST00000529046 FUCA1P04066 466 aa6.88□□□□□ -1.31
CSDE1-212ENST00000529046 NCAM1P13591 858 aa6.88□□□□□ -1.31
CSDE1-212ENST00000529046 KRTAP5-3Q6L8H2 238 aa6.88□□□□□ -1.31
CSDE1-212ENST00000529046 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.88□□□□□ -1.31
CSDE1-212ENST00000529046 TRIM39Q9HCM9 518 aa6.88□□□□□ -1.31
CSDE1-212ENST00000529046 MARCH2Q9P0N8 246 aa6.88□□□□□ -1.31
CSDE1-212ENST00000529046 FAN1Q9Y2M0 1017 aa6.88□□□□□ -1.31
CSDE1-212ENST00000529046 ARHGAP5Q13017 1502 aa6.87□□□□□ -1.31
CSDE1-212ENST00000529046 KIAA1107Q9UPP5 1409 aa6.87□□□□□ -1.31
CSDE1-212ENST00000529046 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.87□□□□□ -1.31
CSDE1-212ENST00000529046 BLACEA4D250 179 aa6.87□□□□□ -1.31
CSDE1-212ENST00000529046 TRIM13O60858 407 aa6.87□□□□□ -1.31
CSDE1-212ENST00000529046 CDC45O75419 566 aa6.87□□□□□ -1.31
CSDE1-212ENST00000529046 ASGR2P07307 311 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms