RNA–Protein interactions for RNA: ENST00000528748.5

CDC27-206, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 859 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-206ENST00000528748 PRR7Q8TB68 274 aa12.55□□□□□ -0.4
CDC27-206ENST00000528748 MORC4Q8TE76 937 aa12.55□□□□□ -0.4
CDC27-206ENST00000528748 NSUN6Q8TEA1 469 aaKnown RBP12.55□□□□□ -0.4
CDC27-206ENST00000528748 C8orf76Q96K31 380 aa12.55□□□□□ -0.4
CDC27-206ENST00000528748 RMDN3Q96TC7 470 aa12.55□□□□□ -0.4
CDC27-206ENST00000528748 TMEM260Q9NX78 707 aa12.55□□□□□ -0.4
CDC27-206ENST00000528748 BIN2Q9UBW5 565 aaPredicted RBP12.55□□□□□ -0.4
CDC27-206ENST00000528748 PCDHA6Q9UN73 950 aa12.55□□□□□ -0.4
CDC27-206ENST00000528748 PCDHA4Q9UN74 947 aa12.55□□□□□ -0.4
CDC27-206ENST00000528748 KIF3AQ9Y496 699 aa12.55□□□□□ -0.4
CDC27-206ENST00000528748 PCDHA8Q9Y5H6 950 aa12.55□□□□□ -0.4
CDC27-206ENST00000528748 ASTN1O14525 1302 aa12.55□□□□□ -0.4
CDC27-206ENST00000528748 LCTP09848 1927 aa12.54□□□□□ -0.4
CDC27-206ENST00000528748 M0R2N6 131 aa12.54□□□□□ -0.4
CDC27-206ENST00000528748 TNFRSF10AO00220 468 aa12.54□□□□□ -0.4
CDC27-206ENST00000528748 ELNP15502 786 aa12.54□□□□□ -0.4
CDC27-206ENST00000528748 GRK4P32298 578 aa12.54□□□□□ -0.4
CDC27-206ENST00000528748 TRIM32Q13049 653 aa12.54□□□□□ -0.4
CDC27-206ENST00000528748 TRIM29Q14134 588 aa12.54□□□□□ -0.4
CDC27-206ENST00000528748 PRPF38BQ5VTL8 546 aaKnown RBP12.54□□□□□ -0.4
CDC27-206ENST00000528748 ARHGEF16Q5VV41 709 aa12.54□□□□□ -0.4
CDC27-206ENST00000528748 MYSM1Q5VVJ2 828 aa12.54□□□□□ -0.4
CDC27-206ENST00000528748 JAKMIP3Q5VZ66 844 aa12.54□□□□□ -0.4
CDC27-206ENST00000528748 FBXO18Q8NFZ0 1043 aa12.54□□□□□ -0.4
CDC27-206ENST00000528748 TRIB2Q92519 343 aa12.54□□□□□ -0.4
CDC27-206ENST00000528748 IWS1Q96ST2 819 aa12.54□□□□□ -0.4
CDC27-206ENST00000528748 TINF2Q9BSI4 451 aa12.54□□□□□ -0.4
CDC27-206ENST00000528748 PXMP2Q9NR77 195 aa12.54□□□□□ -0.4
CDC27-206ENST00000528748 SPDYE3A6NKU9 549 aa12.53□□□□□ -0.4
CDC27-206ENST00000528748 B4DLN1 442 aa12.53□□□□□ -0.4
CDC27-206ENST00000528748 SNAI1O95863 264 aaPredicted RBP12.53□□□□□ -0.4
CDC27-206ENST00000528748 MMP1P03956 469 aa12.53□□□□□ -0.4
CDC27-206ENST00000528748 NR3C2P08235 984 aa12.53□□□□□ -0.4
CDC27-206ENST00000528748 EIF2AK2P19525 551 aaKnown RBP12.53□□□□□ -0.4
CDC27-206ENST00000528748 EDNRBP24530 442 aa12.53□□□□□ -0.4
CDC27-206ENST00000528748 GUCY1B3Q02153 619 aa12.53□□□□□ -0.4
CDC27-206ENST00000528748 AP3B2Q13367 1082 aa12.53□□□□□ -0.4
CDC27-206ENST00000528748 PTPRNQ16849 979 aa12.53□□□□□ -0.4
CDC27-206ENST00000528748 MFSD14CQ5VZR4 134 aa12.53□□□□□ -0.4
CDC27-206ENST00000528748 LARP1BQ659C4 914 aaKnown RBP12.53□□□□□ -0.4
CDC27-206ENST00000528748 DESI1Q6ICB0 168 aa12.53□□□□□ -0.4
CDC27-206ENST00000528748 ARMCX2Q7L311 632 aa12.53□□□□□ -0.4
CDC27-206ENST00000528748 VSIG10LQ86VR7 867 aa12.53□□□□□ -0.4
CDC27-206ENST00000528748 REXO1Q8N1G1 1221 aaKnown RBP12.53□□□□□ -0.4
CDC27-206ENST00000528748 RASGRP4Q8TDF6 673 aa12.53□□□□□ -0.4
CDC27-206ENST00000528748 PDCD2LQ9BRP1 358 aa12.53□□□□□ -0.4
CDC27-206ENST00000528748 RPTORQ8N122 1335 aa12.53□□□□□ -0.4
CDC27-206ENST00000528748 SYNGAP1Q96PV0 1343 aa12.53□□□□□ -0.4
CDC27-206ENST00000528748 RBBP6Q7Z6E9 1792 aaKnown RBP12.53□□□□□ -0.4
CDC27-206ENST00000528748 MCM3APO60318 1980 aa12.52□□□□□ -0.4
CDC27-206ENST00000528748 BTBD18B2RXH4 712 aa12.52□□□□□ -0.41
CDC27-206ENST00000528748 HMGCRP04035 888 aa12.52□□□□□ -0.41
CDC27-206ENST00000528748 HSP90AA1P07900 732 aaKnown RBP12.52□□□□□ -0.41
CDC27-206ENST00000528748 CYP2C19P33261 490 aa12.52□□□□□ -0.41
CDC27-206ENST00000528748 FOXC1Q12948 553 aa12.52□□□□□ -0.41
CDC27-206ENST00000528748 PGM5Q15124 567 aa12.52□□□□□ -0.41
CDC27-206ENST00000528748 STXBP2Q15833 593 aa12.52□□□□□ -0.41
CDC27-206ENST00000528748 TUSC1Q2TAM9 212 aa12.52□□□□□ -0.41
CDC27-206ENST00000528748 PRAMEF19Q5SWL8 479 aa12.52□□□□□ -0.41
CDC27-206ENST00000528748 PGBD1Q96JS3 809 aa12.52□□□□□ -0.41
CDC27-206ENST00000528748 MPHOSPH6Q99547 160 aaKnown RBP12.52□□□□□ -0.41
CDC27-206ENST00000528748 KDM4CQ9H3R0 1056 aa12.52□□□□□ -0.41
CDC27-206ENST00000528748 DDX49Q9Y6V7 483 aaKnown RBP12.52□□□□□ -0.41
CDC27-206ENST00000528748 FRMPD4Q14CM0 1322 aa12.52□□□□□ -0.41
CDC27-206ENST00000528748 EIF3JO75822 258 aaKnown RBP12.51□□□□□ -0.41
CDC27-206ENST00000528748 CCNYL3P0C7X3 344 aa12.51□□□□□ -0.41
CDC27-206ENST00000528748 MYCLP12524 364 aaPredicted RBP12.51□□□□□ -0.41
CDC27-206ENST00000528748 PDCP20941 246 aa12.51□□□□□ -0.41
CDC27-206ENST00000528748 KRT2P35908 639 aa12.51□□□□□ -0.41
CDC27-206ENST00000528748 UBXN2AP68543 259 aa12.51□□□□□ -0.41
CDC27-206ENST00000528748 CACNB2Q08289 660 aaPredicted RBP12.51□□□□□ -0.41
CDC27-206ENST00000528748 SAFBQ15424 915 aaKnown RBP eCLIP12.51□□□□□ -0.41
CDC27-206ENST00000528748 SLC9C1Q4G0N8 1177 aa12.51□□□□□ -0.41
CDC27-206ENST00000528748 XRRA1Q6P2D8 792 aa12.51□□□□□ -0.41
CDC27-206ENST00000528748 TRAF7Q6Q0C0 670 aa12.51□□□□□ -0.41
CDC27-206ENST00000528748 DIS3L2Q8IYB7 885 aaKnown RBP12.51□□□□□ -0.41
CDC27-206ENST00000528748 SH3TC2Q8TF17 1288 aa12.51□□□□□ -0.41
CDC27-206ENST00000528748 ANO3Q9BYT9 981 aa12.51□□□□□ -0.41
CDC27-206ENST00000528748 MCOLN1Q9GZU1 580 aa12.51□□□□□ -0.41
CDC27-206ENST00000528748 ABHD16BQ9H3Z7 469 aa12.51□□□□□ -0.41
CDC27-206ENST00000528748 EHMT1Q9H9B1 1298 aa12.51□□□□□ -0.41
CDC27-206ENST00000528748 BRMS1Q9HCU9 246 aa12.51□□□□□ -0.41
CDC27-206ENST00000528748 PKD2L1Q9P0L9 805 aa12.51□□□□□ -0.41
CDC27-206ENST00000528748 NRBP1Q9UHY1 535 aa12.51□□□□□ -0.41
CDC27-206ENST00000528748 RBM19Q9Y4C8 960 aaKnown RBP12.51□□□□□ -0.41
CDC27-206ENST00000528748 H3BQV1 296 aa12.5□□□□□ -0.41
CDC27-206ENST00000528748 INHAP05111 366 aa12.5□□□□□ -0.41
CDC27-206ENST00000528748 SREBF1P36956 1147 aa12.5□□□□□ -0.41
CDC27-206ENST00000528748 MRPS9P82933 396 aaKnown RBP12.5□□□□□ -0.41
CDC27-206ENST00000528748 NR5A1Q13285 461 aa12.5□□□□□ -0.41
CDC27-206ENST00000528748 ACVR2BQ13705 512 aa12.5□□□□□ -0.41
CDC27-206ENST00000528748 COL13A1Q5TAT6 717 aaPredicted RBP12.5□□□□□ -0.41
CDC27-206ENST00000528748 MAP3K21Q5TCX8 1036 aa12.5□□□□□ -0.41
CDC27-206ENST00000528748 PCNX4Q63HM2 1172 aa12.5□□□□□ -0.41
CDC27-206ENST00000528748 KRT25Q7Z3Z0 450 aa12.5□□□□□ -0.41
CDC27-206ENST00000528748 TRPV1Q8NER1 839 aa12.5□□□□□ -0.41
CDC27-206ENST00000528748 IL31RAQ8NI17 732 aa12.5□□□□□ -0.41
CDC27-206ENST00000528748 CRYGNQ8WXF5 182 aa12.5□□□□□ -0.41
CDC27-206ENST00000528748 TNFRSF25Q93038 417 aa12.5□□□□□ -0.41
CDC27-206ENST00000528748 KATNBL1Q9H079 304 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms