RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 ZNF274Q96GC6 653 aaPredicted RBP16.33■□□□□ 0.2
CAPN1-216ENST00000528739 RNF26Q9BY78 433 aaPredicted RBP16.33■□□□□ 0.2
CAPN1-216ENST00000528739 FTOQ9C0B1 505 aaKnown RBP eCLIP16.33■□□□□ 0.2
CAPN1-216ENST00000528739 JADE2Q9NQC1 790 aa16.33■□□□□ 0.2
CAPN1-216ENST00000528739 H3BRB1 525 aa16.32■□□□□ 0.2
CAPN1-216ENST00000528739 ATP9AO75110 1047 aa16.32■□□□□ 0.2
CAPN1-216ENST00000528739 F2P00734 622 aa16.32■□□□□ 0.2
CAPN1-216ENST00000528739 LGALS2P05162 132 aa16.32■□□□□ 0.2
CAPN1-216ENST00000528739 IFNAR1P17181 557 aa16.32■□□□□ 0.2
CAPN1-216ENST00000528739 AP3B2Q13367 1082 aa16.32■□□□□ 0.2
CAPN1-216ENST00000528739 ZNF697Q5TEC3 545 aa16.32■□□□□ 0.2
CAPN1-216ENST00000528739 CCDC148Q8NFR7 591 aa16.32■□□□□ 0.2
CAPN1-216ENST00000528739 GPR20Q99678 358 aa16.32■□□□□ 0.2
CAPN1-216ENST00000528739 SENP7Q9BQF6 1050 aa16.32■□□□□ 0.2
CAPN1-216ENST00000528739 MXRA8Q9BRK3 442 aa16.32■□□□□ 0.2
CAPN1-216ENST00000528739 SDF4Q9BRK5 362 aa16.32■□□□□ 0.2
CAPN1-216ENST00000528739 WNT8AQ9H1J5 351 aa16.32■□□□□ 0.2
CAPN1-216ENST00000528739 SLKQ9H2G2 1235 aaPredicted RBP16.32■□□□□ 0.2
CAPN1-216ENST00000528739 TUT1Q9H6E5 874 aaKnown RBP16.32■□□□□ 0.2
CAPN1-216ENST00000528739 VPS54Q9P1Q0 977 aa16.32■□□□□ 0.2
CAPN1-216ENST00000528739 GTF2IRD1Q9UHL9 959 aa16.32■□□□□ 0.2
CAPN1-216ENST00000528739 ZNF215Q9UL58 517 aaPredicted RBP16.32■□□□□ 0.2
CAPN1-216ENST00000528739 UBIAD1Q9Y5Z9 338 aa16.32■□□□□ 0.2
CAPN1-216ENST00000528739 LTBP2Q14767 1821 aa16.31■□□□□ 0.2
CAPN1-216ENST00000528739 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.31■□□□□ 0.2
CAPN1-216ENST00000528739 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.31■□□□□ 0.2
CAPN1-216ENST00000528739 C17orf102A2RUQ5 167 aa16.31■□□□□ 0.2
CAPN1-216ENST00000528739 MAFGO15525 162 aa16.31■□□□□ 0.2
CAPN1-216ENST00000528739 ZNF200P98182 395 aaPredicted RBP16.31■□□□□ 0.2
CAPN1-216ENST00000528739 PKN1Q16512 942 aa16.31■□□□□ 0.2
CAPN1-216ENST00000528739 C16orf59Q7L2K0 433 aa16.31■□□□□ 0.2
CAPN1-216ENST00000528739 SESTD1Q86VW0 696 aa16.31■□□□□ 0.2
CAPN1-216ENST00000528739 BICD2Q8TD16 824 aa16.31■□□□□ 0.2
CAPN1-216ENST00000528739 C16orf70Q9BSU1 422 aa16.31■□□□□ 0.2
CAPN1-216ENST00000528739 KIAA1217Q5T5P2 1943 aa16.31■□□□□ 0.2
CAPN1-216ENST00000528739 TCF7P36402 384 aaPredicted RBP16.3■□□□□ 0.2
CAPN1-216ENST00000528739 EVCP57679 992 aa16.3■□□□□ 0.2
CAPN1-216ENST00000528739 ANAPC15P60006 121 aa16.3■□□□□ 0.2
CAPN1-216ENST00000528739 ARHGAP4P98171 946 aa16.3■□□□□ 0.2
CAPN1-216ENST00000528739 ANKRD1Q15327 319 aa16.3■□□□□ 0.2
CAPN1-216ENST00000528739 NTRK3Q16288 839 aa16.3■□□□□ 0.2
CAPN1-216ENST00000528739 MCTP2Q6DN12 878 aa16.3■□□□□ 0.2
CAPN1-216ENST00000528739 GPR153Q6NV75 609 aa16.3■□□□□ 0.2
CAPN1-216ENST00000528739 TRIM50Q86XT4 487 aa16.3■□□□□ 0.2
CAPN1-216ENST00000528739 TEX2Q8IWB9 1127 aa16.3■□□□□ 0.2
CAPN1-216ENST00000528739 REXO1Q8N1G1 1221 aaKnown RBP16.3■□□□□ 0.2
CAPN1-216ENST00000528739 CYP2W1Q8TAV3 490 aa16.3■□□□□ 0.2
CAPN1-216ENST00000528739 CAGE1Q8TC20 777 aa16.3■□□□□ 0.2
CAPN1-216ENST00000528739 SEPT1Q8WYJ6 367 aa16.3■□□□□ 0.2
CAPN1-216ENST00000528739 GLG1Q92896 1179 aa16.3■□□□□ 0.2
CAPN1-216ENST00000528739 ZMYND12Q9H0C1 365 aa16.3■□□□□ 0.2
CAPN1-216ENST00000528739 NID2Q14112 1375 aa16.29■□□□□ 0.2
CAPN1-216ENST00000528739 DDX39AO00148 427 aaKnown RBP16.29■□□□□ 0.2
CAPN1-216ENST00000528739 HAS3O00219 553 aa16.29■□□□□ 0.2
CAPN1-216ENST00000528739 CDKL5O76039 1030 aa16.29■□□□□ 0.2
CAPN1-216ENST00000528739 IQCF3P0C7M6 154 aa16.29■□□□□ 0.2
CAPN1-216ENST00000528739 SMIM10L2AP0DMW4 78 aa16.29■□□□□ 0.2
CAPN1-216ENST00000528739 SMIM10L2BP0DMW5 78 aa16.29■□□□□ 0.2
CAPN1-216ENST00000528739 ARP10275 920 aa16.29■□□□□ 0.2
CAPN1-216ENST00000528739 GNAT1P11488 350 aa16.29■□□□□ 0.2
CAPN1-216ENST00000528739 ACTN1P12814 892 aa16.29■□□□□ 0.2
CAPN1-216ENST00000528739 HOXD8P13378 290 aaPredicted RBP16.29■□□□□ 0.2
CAPN1-216ENST00000528739 KCNA2P16389 499 aa16.29■□□□□ 0.2
CAPN1-216ENST00000528739 MARK3P27448 753 aa16.29■□□□□ 0.2
CAPN1-216ENST00000528739 CLK2P49760 499 aaKnown RBP16.29■□□□□ 0.2
CAPN1-216ENST00000528739 SMAD3P84022 425 aaKnown RBP16.29■□□□□ 0.2
CAPN1-216ENST00000528739 CEP55Q53EZ4 464 aa16.29■□□□□ 0.2
CAPN1-216ENST00000528739 PLA2G4DQ86XP0 818 aa16.29■□□□□ 0.2
CAPN1-216ENST00000528739 RASGRP4Q8TDF6 673 aa16.29■□□□□ 0.2
CAPN1-216ENST00000528739 ATP6V0A1Q93050 837 aa16.29■□□□□ 0.2
CAPN1-216ENST00000528739 UIMC1Q96RL1 719 aa16.29■□□□□ 0.2
CAPN1-216ENST00000528739 KCNH7Q9NS40 1196 aa16.29■□□□□ 0.2
CAPN1-216ENST00000528739 TELO2Q9Y4R8 837 aa16.29■□□□□ 0.2
CAPN1-216ENST00000528739 ESYT2A0FGR8 921 aa16.28■□□□□ 0.2
CAPN1-216ENST00000528739 PITPNM1O00562 1244 aa16.28■□□□□ 0.2
CAPN1-216ENST00000528739 DEXIO95424 95 aa16.28■□□□□ 0.2
CAPN1-216ENST00000528739 RFC2P35250 354 aa16.28■□□□□ 0.2
CAPN1-216ENST00000528739 SREBF1P36956 1147 aa16.28■□□□□ 0.2
CAPN1-216ENST00000528739 AK2P54819 239 aa16.28■□□□□ 0.2
CAPN1-216ENST00000528739 PTK7Q13308 1070 aa16.28■□□□□ 0.2
CAPN1-216ENST00000528739 AFAP1L1Q8TED9 768 aa16.28■□□□□ 0.2
CAPN1-216ENST00000528739 HERVK_113Q902F9 699 aa16.28■□□□□ 0.2
CAPN1-216ENST00000528739 AZI2Q9H6S1 392 aa16.28■□□□□ 0.2
CAPN1-216ENST00000528739 JPH1Q9HDC5 661 aaPredicted RBP16.28■□□□□ 0.2
CAPN1-216ENST00000528739 SETD4Q9NVD3 440 aa16.28■□□□□ 0.2
CAPN1-216ENST00000528739 SLC9A2Q9UBY0 812 aa16.28■□□□□ 0.2
CAPN1-216ENST00000528739 TCEAL9Q9UHQ7 104 aa16.28■□□□□ 0.2
CAPN1-216ENST00000528739 SLC4A7Q9Y6M7 1214 aa16.28■□□□□ 0.2
CAPN1-216ENST00000528739 GRXCR1A8MXD5 290 aa16.27■□□□□ 0.2
CAPN1-216ENST00000528739 SEC24BO95487 1268 aa16.27■□□□□ 0.2
CAPN1-216ENST00000528739 PFKMP08237 780 aa16.27■□□□□ 0.2
CAPN1-216ENST00000528739 SELPP16109 830 aa16.27■□□□□ 0.2
CAPN1-216ENST00000528739 THPOP40225 353 aa16.27■□□□□ 0.2
CAPN1-216ENST00000528739 NEK4P51957 841 aa16.27■□□□□ 0.2
CAPN1-216ENST00000528739 SCRN1Q12765 414 aa16.27■□□□□ 0.2
CAPN1-216ENST00000528739 LRRC8DQ7L1W4 858 aa16.27■□□□□ 0.2
CAPN1-216ENST00000528739 RNPEPQ9H4A4 650 aa16.27■□□□□ 0.2
CAPN1-216ENST00000528739 TPCN1Q9ULQ1 816 aa16.27■□□□□ 0.2
CAPN1-216ENST00000528739 RANBP2P49792 3224 aaKnown RBP16.26■□□□□ 0.19
CAPN1-216ENST00000528739 MYH7BA7E2Y1 1941 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms