RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 PSMD10O75832 226 aa13.73□□□□□ -0.21
TRAF3IP2-211ENST00000528599 TGFB3P10600 412 aa13.73□□□□□ -0.21
TRAF3IP2-211ENST00000528599 CYBAP13498 195 aa13.73□□□□□ -0.21
TRAF3IP2-211ENST00000528599 PTGS1P23219 599 aa13.73□□□□□ -0.21
TRAF3IP2-211ENST00000528599 CACNB2Q08289 660 aaPredicted RBP13.73□□□□□ -0.21
TRAF3IP2-211ENST00000528599 LY6KQ17RY6 165 aa13.73□□□□□ -0.21
TRAF3IP2-211ENST00000528599 CCDC144BQ3MJ40 725 aa13.73□□□□□ -0.21
TRAF3IP2-211ENST00000528599 ARL6IP4Q66PJ3 421 aaKnown RBP13.73□□□□□ -0.21
TRAF3IP2-211ENST00000528599 KCNG4Q8TDN1 519 aa13.73□□□□□ -0.21
TRAF3IP2-211ENST00000528599 TTC12Q9H892 705 aaPredicted RBP13.73□□□□□ -0.21
TRAF3IP2-211ENST00000528599 KIAA0100Q14667 2235 aaKnown RBP13.73□□□□□ -0.21
TRAF3IP2-211ENST00000528599 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 CCDC85CA6NKD9 419 aa13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 ADCY6O43306 1168 aa13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 HMGCRP04035 888 aa13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 INHAP05111 366 aa13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 TXNP10599 105 aaKnown RBP13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 UBA1P22314 1058 aaKnown RBP13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 TTLL4Q14679 1199 aa13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 LRCH2Q5VUJ6 765 aa13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 KCNV1Q6PIU1 500 aa13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 DTHD1Q6ZMT9 781 aa13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 SLFN12Q8IYM2 578 aa13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 SLAIN1Q8ND83 568 aa13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 COPS5Q92905 334 aa13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 CLIC6Q96NY7 704 aa13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 GBP4Q96PP9 640 aa13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 RIT2Q99578 217 aa13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 SENP7Q9BQF6 1050 aa13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 NRBP1Q9UHY1 535 aa13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 VAV3Q9UKW4 847 aa13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 PCDHA7Q9UN72 937 aa13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 PCDHA12Q9UN75 941 aa13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 SRPRBQ9Y5M8 271 aaKnown RBP13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 VWA3AA6NCI4 1184 aa13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 DDX39AO00148 427 aaKnown RBP13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 SORBS3O60504 671 aa13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 GAS7O60861 476 aa13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 PRKAR2AP13861 404 aaKnown RBP13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 SMPD1P17405 629 aa13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 TECP42680 631 aa13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 ME1P48163 572 aa13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 SPIRE1Q08AE8 756 aa13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 AXDND1Q5T1B0 1012 aaPredicted RBP13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 GJC2Q5T442 439 aaPredicted RBP13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 MAP3K21Q5TCX8 1036 aa13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 IQSEC1Q6DN90 963 aa13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 KRI1Q8N9T8 703 aaKnown RBP13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 FERMT2Q96AC1 680 aa13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 TBC1D22BQ9NU19 505 aa13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 TELO2Q9Y4R8 837 aa13.72□□□□□ -0.21
TRAF3IP2-211ENST00000528599 NFASCO94856 1347 aa13.71□□□□□ -0.21
TRAF3IP2-211ENST00000528599 ELP1O95163 1332 aa13.71□□□□□ -0.21
TRAF3IP2-211ENST00000528599 GGPS1O95749 300 aa13.71□□□□□ -0.21
TRAF3IP2-211ENST00000528599 FXR2P51116 673 aaKnown RBP eCLIP13.71□□□□□ -0.21
TRAF3IP2-211ENST00000528599 B3GNT9Q6UX72 402 aa13.71□□□□□ -0.21
TRAF3IP2-211ENST00000528599 CYFIP1Q7L576 1253 aa13.71□□□□□ -0.21
TRAF3IP2-211ENST00000528599 TMEM87AQ8NBN3 555 aa13.71□□□□□ -0.21
TRAF3IP2-211ENST00000528599 TEKT3Q9BXF9 490 aa13.71□□□□□ -0.21
TRAF3IP2-211ENST00000528599 CSRNP2Q9H175 543 aa13.71□□□□□ -0.21
TRAF3IP2-211ENST00000528599 UNC45AQ9H3U1 944 aa13.71□□□□□ -0.21
TRAF3IP2-211ENST00000528599 DOCK5Q9H7D0 1870 aa13.71□□□□□ -0.22
TRAF3IP2-211ENST00000528599 POTEFA5A3E0 1075 aa13.7□□□□□ -0.22
TRAF3IP2-211ENST00000528599 POTEMA6NI47 508 aa13.7□□□□□ -0.22
TRAF3IP2-211ENST00000528599 CUTAO60888 179 aa13.7□□□□□ -0.22
TRAF3IP2-211ENST00000528599 CCNE2O96020 404 aa13.7□□□□□ -0.22
TRAF3IP2-211ENST00000528599 CCND3P30281 292 aaPredicted RBP13.7□□□□□ -0.22
TRAF3IP2-211ENST00000528599 SOX10P56693 466 aa13.7□□□□□ -0.22
TRAF3IP2-211ENST00000528599 TNFAIP2Q03169 654 aa13.7□□□□□ -0.22
TRAF3IP2-211ENST00000528599 ARHGAP1Q07960 439 aa13.7□□□□□ -0.22
TRAF3IP2-211ENST00000528599 NEDD9Q14511 834 aa13.7□□□□□ -0.22
TRAF3IP2-211ENST00000528599 DUSP28Q4G0W2 176 aa13.7□□□□□ -0.22
TRAF3IP2-211ENST00000528599 SPECC1Q5M775 1068 aa13.7□□□□□ -0.22
TRAF3IP2-211ENST00000528599 CELF3Q5SZQ8 465 aaKnown RBP13.7□□□□□ -0.22
TRAF3IP2-211ENST00000528599 IGSF22Q8N9C0 903 aa13.7□□□□□ -0.22
TRAF3IP2-211ENST00000528599 LENG1Q96BZ8 264 aaPredicted RBP13.7□□□□□ -0.22
TRAF3IP2-211ENST00000528599 SDF4Q9BRK5 362 aa13.7□□□□□ -0.22
TRAF3IP2-211ENST00000528599 FAM184BQ9ULE4 1060 aa13.7□□□□□ -0.22
TRAF3IP2-211ENST00000528599 PP2D1A8MPX8 630 aa13.69□□□□□ -0.22
TRAF3IP2-211ENST00000528599 EML1O00423 815 aa13.69□□□□□ -0.22
TRAF3IP2-211ENST00000528599 CHMP2AO43633 222 aa13.69□□□□□ -0.22
TRAF3IP2-211ENST00000528599 FARP2O94887 1054 aaPredicted RBP13.69□□□□□ -0.22
TRAF3IP2-211ENST00000528599 CDC25AP30304 524 aa13.69□□□□□ -0.22
TRAF3IP2-211ENST00000528599 PPP2R5CQ13362 524 aa13.69□□□□□ -0.22
TRAF3IP2-211ENST00000528599 PDIA5Q14554 519 aa13.69□□□□□ -0.22
TRAF3IP2-211ENST00000528599 TMEM266Q2M3C6 531 aa13.69□□□□□ -0.22
TRAF3IP2-211ENST00000528599 USP49Q70CQ1 688 aa13.69□□□□□ -0.22
TRAF3IP2-211ENST00000528599 GIMAP8Q8ND71 665 aaPredicted RBP13.69□□□□□ -0.22
TRAF3IP2-211ENST00000528599 UNC93B1Q9H1C4 597 aa13.69□□□□□ -0.22
TRAF3IP2-211ENST00000528599 JPH1Q9HDC5 661 aaPredicted RBP13.69□□□□□ -0.22
TRAF3IP2-211ENST00000528599 SLC9A2Q9UBY0 812 aa13.69□□□□□ -0.22
TRAF3IP2-211ENST00000528599 GNEQ9Y223 722 aaKnown RBP13.69□□□□□ -0.22
TRAF3IP2-211ENST00000528599 SEPT4O43236 478 aa13.69□□□□□ -0.22
TRAF3IP2-211ENST00000528599 GADD45BO75293 160 aaPredicted RBP13.69□□□□□ -0.22
TRAF3IP2-211ENST00000528599 PRPF40AO75400 957 aaKnown RBP13.69□□□□□ -0.22
TRAF3IP2-211ENST00000528599 AKR1A1P14550 325 aa13.69□□□□□ -0.22
TRAF3IP2-211ENST00000528599 CNGA1P29973 690 aa13.69□□□□□ -0.22
TRAF3IP2-211ENST00000528599 MCM4P33991 863 aa13.69□□□□□ -0.22
TRAF3IP2-211ENST00000528599 LONP1P36776 959 aaKnown RBP13.69□□□□□ -0.22
TRAF3IP2-211ENST00000528599 SP4Q02446 784 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms