RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 PHOSPHO1Q8TCT1 267 aa8.36□□□□□ -1.07
PCF11-202ENST00000528336 CLEC4DQ8WXI8 215 aa8.36□□□□□ -1.07
PCF11-202ENST00000528336 SAMD15Q9P1V8 674 aa8.36□□□□□ -1.07
PCF11-202ENST00000528336 ASH2LQ9UBL3 628 aa8.36□□□□□ -1.07
PCF11-202ENST00000528336 FAN1Q9Y2M0 1017 aa8.36□□□□□ -1.07
PCF11-202ENST00000528336 STAT5AP42229 794 aa8.35□□□□□ -1.07
PCF11-202ENST00000528336 RAP1GAPP47736 663 aa8.35□□□□□ -1.07
PCF11-202ENST00000528336 GYS2P54840 703 aa8.35□□□□□ -1.07
PCF11-202ENST00000528336 ETV3LQ6ZN32 361 aa8.35□□□□□ -1.07
PCF11-202ENST00000528336 DDX53Q86TM3 631 aaKnown RBP8.35□□□□□ -1.07
PCF11-202ENST00000528336 PTRH1Q86Y79 214 aaKnown RBP8.35□□□□□ -1.07
PCF11-202ENST00000528336 FAM26EQ8N5C1 309 aa8.35□□□□□ -1.07
PCF11-202ENST00000528336 MAGEC2Q9UBF1 373 aaPredicted RBP8.35□□□□□ -1.07
PCF11-202ENST00000528336 SMG5Q9UPR3 1016 aaKnown RBP8.35□□□□□ -1.07
PCF11-202ENST00000528336 NUB1Q9Y5A7 615 aa8.35□□□□□ -1.07
PCF11-202ENST00000528336 IRAK3Q9Y616 596 aa8.35□□□□□ -1.07
PCF11-202ENST00000528336 B4E1Z4 1266 aa8.34□□□□□ -1.07
PCF11-202ENST00000528336 CLSTN1O94985 981 aa8.34□□□□□ -1.07
PCF11-202ENST00000528336 AMY2AP04746 511 aa8.34□□□□□ -1.07
PCF11-202ENST00000528336 C8AP07357 584 aa8.34□□□□□ -1.07
PCF11-202ENST00000528336 MED14OSP0DP75 135 aa8.34□□□□□ -1.07
PCF11-202ENST00000528336 AMY2BP19961 511 aa8.34□□□□□ -1.07
PCF11-202ENST00000528336 LIMS1P48059 325 aa8.34□□□□□ -1.07
PCF11-202ENST00000528336 CYP4F22Q6NT55 531 aa8.34□□□□□ -1.07
PCF11-202ENST00000528336 ZCCHC8Q6NZY4 707 aaKnown RBP8.34□□□□□ -1.07
PCF11-202ENST00000528336 CD300LDQ6UXZ3 194 aa8.34□□□□□ -1.07
PCF11-202ENST00000528336 TRIM48Q8IWZ4 208 aa8.34□□□□□ -1.07
PCF11-202ENST00000528336 FAM126BQ8IXS8 530 aa8.34□□□□□ -1.07
PCF11-202ENST00000528336 SH3RF2Q8TEC5 729 aa8.34□□□□□ -1.07
PCF11-202ENST00000528336 DDX11Q96FC9 970 aa8.34□□□□□ -1.07
PCF11-202ENST00000528336 SIGLEC10Q96LC7 697 aa8.34□□□□□ -1.07
PCF11-202ENST00000528336 CELF4Q9BZC1 486 aaKnown RBP8.34□□□□□ -1.07
PCF11-202ENST00000528336 RNF38Q9H0F5 515 aa8.34□□□□□ -1.07
PCF11-202ENST00000528336 SLKQ9H2G2 1235 aaPredicted RBP8.34□□□□□ -1.07
PCF11-202ENST00000528336 CNOT6Q9ULM6 557 aaKnown RBP8.34□□□□□ -1.07
PCF11-202ENST00000528336 M0R2C6 588 aa8.33□□□□□ -1.08
PCF11-202ENST00000528336 JMJD7P0C870 316 aa8.33□□□□□ -1.08
PCF11-202ENST00000528336 HSP90B1P14625 803 aaKnown RBP8.33□□□□□ -1.08
PCF11-202ENST00000528336 FLT3P36888 993 aa8.33□□□□□ -1.08
PCF11-202ENST00000528336 CACNB2Q08289 660 aaPredicted RBP8.33□□□□□ -1.08
PCF11-202ENST00000528336 SSPNQ14714 243 aa8.33□□□□□ -1.08
PCF11-202ENST00000528336 CFAP100Q494V2 611 aa8.33□□□□□ -1.08
PCF11-202ENST00000528336 UBE2R2Q712K3 238 aaPredicted RBP8.33□□□□□ -1.08
PCF11-202ENST00000528336 OVCH1Q7RTY7 1134 aa8.33□□□□□ -1.08
PCF11-202ENST00000528336 MIB1Q86YT6 1006 aa8.33□□□□□ -1.08
PCF11-202ENST00000528336 PANK1Q8TE04 598 aa8.33□□□□□ -1.08
PCF11-202ENST00000528336 CPA5Q8WXQ8 436 aa8.33□□□□□ -1.08
PCF11-202ENST00000528336 PLAAQ9Y263 795 aa8.33□□□□□ -1.08
PCF11-202ENST00000528336 TELO2Q9Y4R8 837 aa8.33□□□□□ -1.08
PCF11-202ENST00000528336 NPIPB6E9PJ23 425 aa8.32□□□□□ -1.08
PCF11-202ENST00000528336 ZNF561-AS1K7EIQ3 104 aa8.32□□□□□ -1.08
PCF11-202ENST00000528336 MAN2B1O00754 1011 aa8.32□□□□□ -1.08
PCF11-202ENST00000528336 TSPAN15O95858 294 aa8.32□□□□□ -1.08
PCF11-202ENST00000528336 IGFBP6P24592 240 aaPredicted RBP8.32□□□□□ -1.08
PCF11-202ENST00000528336 NEK4P51957 841 aa8.32□□□□□ -1.08
PCF11-202ENST00000528336 LACTBP83111 547 aaPredicted RBP8.32□□□□□ -1.08
PCF11-202ENST00000528336 FOXO4P98177 505 aa8.32□□□□□ -1.08
PCF11-202ENST00000528336 TMEM177Q53S58 311 aa8.32□□□□□ -1.08
PCF11-202ENST00000528336 PIK3R6Q5UE93 754 aa8.32□□□□□ -1.08
PCF11-202ENST00000528336 KCTD1Q719H9 257 aa8.32□□□□□ -1.08
PCF11-202ENST00000528336 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.32□□□□□ -1.08
PCF11-202ENST00000528336 LRRTM3Q86VH5 581 aa8.32□□□□□ -1.08
PCF11-202ENST00000528336 SMARCC2Q8TAQ2 1214 aa8.32□□□□□ -1.08
PCF11-202ENST00000528336 MFSD3Q96ES6 412 aa8.32□□□□□ -1.08
PCF11-202ENST00000528336 TOE1Q96GM8 510 aaKnown RBP8.32□□□□□ -1.08
PCF11-202ENST00000528336 SYT3Q9BQG1 590 aa8.32□□□□□ -1.08
PCF11-202ENST00000528336 SMURF1Q9HCE7 757 aa8.32□□□□□ -1.08
PCF11-202ENST00000528336 INTS7Q9NVH2 962 aaKnown RBP8.32□□□□□ -1.08
PCF11-202ENST00000528336 SRPK3Q9UPE1 567 aa8.32□□□□□ -1.08
PCF11-202ENST00000528336 KCTD3Q9Y597 815 aa8.32□□□□□ -1.08
PCF11-202ENST00000528336 GLRX3O76003 335 aaKnown RBP8.31□□□□□ -1.08
PCF11-202ENST00000528336 NPTXRO95502 500 aa8.31□□□□□ -1.08
PCF11-202ENST00000528336 C8BP07358 591 aa8.31□□□□□ -1.08
PCF11-202ENST00000528336 PI3P19957 117 aa8.31□□□□□ -1.08
PCF11-202ENST00000528336 TAF7LQ5H9L4 462 aa8.31□□□□□ -1.08
PCF11-202ENST00000528336 BTBD8Q5XKL5 378 aa8.31□□□□□ -1.08
PCF11-202ENST00000528336 CDCA2Q69YH5 1023 aaPredicted RBP8.31□□□□□ -1.08
PCF11-202ENST00000528336 B3GNT8Q7Z7M8 397 aa8.31□□□□□ -1.08
PCF11-202ENST00000528336 ZC3H18Q86VM9 953 aaKnown RBP8.31□□□□□ -1.08
PCF11-202ENST00000528336 ANKLE2Q86XL3 938 aa8.31□□□□□ -1.08
PCF11-202ENST00000528336 TMEFF1Q8IYR6 380 aa8.31□□□□□ -1.08
PCF11-202ENST00000528336 C2orf69Q8N8R5 385 aa8.31□□□□□ -1.08
PCF11-202ENST00000528336 BHLHE22Q8NFJ8 381 aaPredicted RBP8.31□□□□□ -1.08
PCF11-202ENST00000528336 WNK4Q96J92 1243 aa8.31□□□□□ -1.08
PCF11-202ENST00000528336 CD320Q9NPF0 282 aa8.31□□□□□ -1.08
PCF11-202ENST00000528336 RIC8BQ9NVN3 520 aa8.31□□□□□ -1.08
PCF11-202ENST00000528336 DTLQ9NZJ0 730 aa8.31□□□□□ -1.08
PCF11-202ENST00000528336 KPNA6O60684 536 aa8.3□□□□□ -1.08
PCF11-202ENST00000528336 CYP2C8P10632 490 aa8.3□□□□□ -1.08
PCF11-202ENST00000528336 MYCLP1P12525 358 aaPredicted RBP8.3□□□□□ -1.08
PCF11-202ENST00000528336 CNKSR3Q6P9H4 555 aa8.3□□□□□ -1.08
PCF11-202ENST00000528336 STK32CQ86UX6 486 aa8.3□□□□□ -1.08
PCF11-202ENST00000528336 NLGN4XQ8N0W4 816 aa8.3□□□□□ -1.08
PCF11-202ENST00000528336 ATP23Q9Y6H3 246 aa8.3□□□□□ -1.08
PCF11-202ENST00000528336 LRG1P02750 347 aa8.29□□□□□ -1.08
PCF11-202ENST00000528336 CDK11BP21127 795 aaKnown RBP8.29□□□□□ -1.08
PCF11-202ENST00000528336 LINC00310P59036 64 aa8.29□□□□□ -1.08
PCF11-202ENST00000528336 NKX3-2P78367 333 aa8.29□□□□□ -1.08
PCF11-202ENST00000528336 KCNA10Q16322 511 aa8.29□□□□□ -1.08
PCF11-202ENST00000528336 CR1LQ2VPA4 569 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms