RNA–Protein interactions for RNA: ENST00000528302.5

SF3B2-206, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 5 BASIC

Gene SF3B2, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-206ENST00000528302 CHORDC1Q9UHD1 332 aaPredicted RBP10.85□□□□□ -0.67
SF3B2-206ENST00000528302 NID2Q14112 1375 aa10.85□□□□□ -0.67
SF3B2-206ENST00000528302 TLR2O60603 784 aa10.85□□□□□ -0.67
SF3B2-206ENST00000528302 FLT3P36888 993 aa10.85□□□□□ -0.67
SF3B2-206ENST00000528302 KCNMA1Q12791 1236 aa10.85□□□□□ -0.67
SF3B2-206ENST00000528302 NFIXQ14938 502 aa10.85□□□□□ -0.67
SF3B2-206ENST00000528302 SLC9C1Q4G0N8 1177 aa10.85□□□□□ -0.67
SF3B2-206ENST00000528302 MMGT1Q8N4V1 131 aa10.85□□□□□ -0.67
SF3B2-206ENST00000528302 TAF4BQ92750 862 aa10.85□□□□□ -0.67
SF3B2-206ENST00000528302 CEP95Q96GE4 821 aa10.85□□□□□ -0.67
SF3B2-206ENST00000528302 SCLT1Q96NL6 688 aa10.85□□□□□ -0.67
SF3B2-206ENST00000528302 NLRP3Q96P20 1036 aa10.85□□□□□ -0.67
SF3B2-206ENST00000528302 LRRC4CQ9HCJ2 640 aa10.85□□□□□ -0.67
SF3B2-206ENST00000528302 DOT1LQ8TEK3 1739 aa10.85□□□□□ -0.67
SF3B2-206ENST00000528302 SFI1A8K8P3 1242 aa10.85□□□□□ -0.67
SF3B2-206ENST00000528302 DCDC2CA8MYV0 355 aa10.85□□□□□ -0.67
SF3B2-206ENST00000528302 MPHOSPH10O00566 681 aaKnown RBP10.85□□□□□ -0.67
SF3B2-206ENST00000528302 ORC4O43929 436 aa10.85□□□□□ -0.67
SF3B2-206ENST00000528302 ABCB4P21439 1286 aa10.85□□□□□ -0.67
SF3B2-206ENST00000528302 E2F5Q15329 346 aa10.85□□□□□ -0.67
SF3B2-206ENST00000528302 SPAG5Q96R06 1193 aa10.85□□□□□ -0.67
SF3B2-206ENST00000528302 ERGIC2Q96RQ1 377 aa10.85□□□□□ -0.67
SF3B2-206ENST00000528302 CCDC113Q9H0I3 377 aa10.85□□□□□ -0.67
SF3B2-206ENST00000528302 ATP8A2Q9NTI2 1148 aa10.85□□□□□ -0.67
SF3B2-206ENST00000528302 CCNL1Q9UK58 526 aaPredicted RBP10.85□□□□□ -0.67
SF3B2-206ENST00000528302 ABCA3Q99758 1704 aa10.85□□□□□ -0.67
SF3B2-206ENST00000528302 LRP6O75581 1613 aa10.84□□□□□ -0.67
SF3B2-206ENST00000528302 GOLGA6L10A6NI86 522 aa10.84□□□□□ -0.67
SF3B2-206ENST00000528302 ITGA4P13612 1032 aa10.84□□□□□ -0.67
SF3B2-206ENST00000528302 C12orf60Q5U649 245 aa10.84□□□□□ -0.67
SF3B2-206ENST00000528302 KRT79Q5XKE5 535 aa10.84□□□□□ -0.67
SF3B2-206ENST00000528302 TTBK2Q6IQ55 1244 aa10.84□□□□□ -0.67
SF3B2-206ENST00000528302 PDXDC1Q6P996 788 aa10.84□□□□□ -0.67
SF3B2-206ENST00000528302 MDM1Q8TC05 714 aa10.84□□□□□ -0.67
SF3B2-206ENST00000528302 PNMA5Q96PV4 448 aa10.84□□□□□ -0.67
SF3B2-206ENST00000528302 AMACRQ9UHK6 382 aa10.84□□□□□ -0.67
SF3B2-206ENST00000528302 GGT7Q9UJ14 662 aa10.84□□□□□ -0.67
SF3B2-206ENST00000528302 KIAA1024Q9UPX6 916 aa10.84□□□□□ -0.67
SF3B2-206ENST00000528302 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.84□□□□□ -0.67
SF3B2-206ENST00000528302 SLC9A1P19634 815 aa10.84□□□□□ -0.67
SF3B2-206ENST00000528302 GUCY2CP25092 1073 aa10.84□□□□□ -0.67
SF3B2-206ENST00000528302 CTNNA1P35221 906 aaKnown RBP10.84□□□□□ -0.67
SF3B2-206ENST00000528302 SF3B2Q13435 895 aaKnown RBP10.84□□□□□ -0.67
SF3B2-206ENST00000528302 GRM4Q14833 912 aa10.84□□□□□ -0.67
SF3B2-206ENST00000528302 BAP1Q92560 729 aa10.84□□□□□ -0.67
SF3B2-206ENST00000528302 TSG101Q99816 390 aa10.84□□□□□ -0.67
SF3B2-206ENST00000528302 BSDC1Q9NW68 430 aaPredicted RBP10.84□□□□□ -0.67
SF3B2-206ENST00000528302 UBAP1LF5GYI3 381 aa10.83□□□□□ -0.67
SF3B2-206ENST00000528302 CLIC2O15247 247 aa10.83□□□□□ -0.67
SF3B2-206ENST00000528302 PDE6BP35913 854 aa10.83□□□□□ -0.67
SF3B2-206ENST00000528302 MYOCDQ8IZQ8 938 aa10.83□□□□□ -0.67
SF3B2-206ENST00000528302 RETREG2Q8NC44 543 aa10.83□□□□□ -0.67
SF3B2-206ENST00000528302 PURBQ96QR8 312 aaKnown RBP10.83□□□□□ -0.67
SF3B2-206ENST00000528302 CCT8L2Q96SF2 557 aa10.83□□□□□ -0.67
SF3B2-206ENST00000528302 MTA3Q9BTC8 594 aa10.83□□□□□ -0.67
SF3B2-206ENST00000528302 PANK4Q9NVE7 773 aa10.83□□□□□ -0.67
SF3B2-206ENST00000528302 ZNF804BA4D1E1 1349 aa10.83□□□□□ -0.68
SF3B2-206ENST00000528302 DISP2A7MBM2 1401 aa10.83□□□□□ -0.68
SF3B2-206ENST00000528302 GOLGA6L7A0A1B0GV03 622 aa10.83□□□□□ -0.68
SF3B2-206ENST00000528302 POTEB3A0JP26 581 aa10.83□□□□□ -0.68
SF3B2-206ENST00000528302 POTECB2RU33 542 aa10.83□□□□□ -0.68
SF3B2-206ENST00000528302 CYP4A11Q02928 519 aa10.83□□□□□ -0.68
SF3B2-206ENST00000528302 PAK2Q13177 524 aa10.83□□□□□ -0.68
SF3B2-206ENST00000528302 POTEBQ6S5H4 581 aa10.83□□□□□ -0.68
SF3B2-206ENST00000528302 KCTD1Q719H9 257 aa10.83□□□□□ -0.68
SF3B2-206ENST00000528302 ZNF473Q8WTR7 871 aaKnown RBP10.83□□□□□ -0.68
SF3B2-206ENST00000528302 C7orf25Q9BPX7 421 aa10.83□□□□□ -0.68
SF3B2-206ENST00000528302 NOVA2Q9UNW9 492 aaKnown RBP10.83□□□□□ -0.68
SF3B2-206ENST00000528302 FAM196BA6NMK8 535 aa10.83□□□□□ -0.68
SF3B2-206ENST00000528302 PHF20L1A8MW92 1017 aa10.83□□□□□ -0.68
SF3B2-206ENST00000528302 USP17L15C9J2P7 530 aa10.83□□□□□ -0.68
SF3B2-206ENST00000528302 USP17L13C9JLJ4 530 aa10.83□□□□□ -0.68
SF3B2-206ENST00000528302 USP17L11C9JVI0 530 aa10.83□□□□□ -0.68
SF3B2-206ENST00000528302 USP17L18D6R9N7 530 aa10.83□□□□□ -0.68
SF3B2-206ENST00000528302 USP17L22D6RA61 530 aa10.83□□□□□ -0.68
SF3B2-206ENST00000528302 USP17L17D6RBQ6 530 aa10.83□□□□□ -0.68
SF3B2-206ENST00000528302 USP17L19D6RCP7 530 aa10.83□□□□□ -0.68
SF3B2-206ENST00000528302 USP17L20D6RJB6 530 aa10.83□□□□□ -0.68
SF3B2-206ENST00000528302 DAPK3O43293 454 aa10.83□□□□□ -0.68
SF3B2-206ENST00000528302 RASA1P20936 1047 aa10.83□□□□□ -0.68
SF3B2-206ENST00000528302 USP17L24Q0WX57 530 aa10.83□□□□□ -0.68
SF3B2-206ENST00000528302 TMEM266Q2M3C6 531 aa10.83□□□□□ -0.68
SF3B2-206ENST00000528302 SPRED3Q2MJR0 410 aa10.83□□□□□ -0.68
SF3B2-206ENST00000528302 MCTP2Q6DN12 878 aa10.83□□□□□ -0.68
SF3B2-206ENST00000528302 CENPPQ6IPU0 288 aa10.83□□□□□ -0.68
SF3B2-206ENST00000528302 EMBQ6PCB8 327 aa10.83□□□□□ -0.68
SF3B2-206ENST00000528302 USP17L6PQ6QN14 398 aa10.83□□□□□ -0.68
SF3B2-206ENST00000528302 CCDC84Q86UT8 332 aaPredicted RBP10.83□□□□□ -0.68
SF3B2-206ENST00000528302 TEX11Q8IYF3 940 aa10.83□□□□□ -0.68
SF3B2-206ENST00000528302 CCDC114Q96M63 670 aa10.83□□□□□ -0.68
SF3B2-206ENST00000528302 NEUROG2Q9H2A3 272 aa10.83□□□□□ -0.68
SF3B2-206ENST00000528302 ZNF219Q9P2Y4 722 aaPredicted RBP10.83□□□□□ -0.68
SF3B2-206ENST00000528302 TMEM110-MUSTN1A8MSY1 372 aa10.82□□□□□ -0.68
SF3B2-206ENST00000528302 GNA11P29992 359 aa10.82□□□□□ -0.68
SF3B2-206ENST00000528302 CDK8P49336 464 aa10.82□□□□□ -0.68
SF3B2-206ENST00000528302 ERVK-9P63128 1117 aa10.82□□□□□ -0.68
SF3B2-206ENST00000528302 PLS1Q14651 629 aa10.82□□□□□ -0.68
SF3B2-206ENST00000528302 RPS6KA1Q15418 735 aa10.82□□□□□ -0.68
SF3B2-206ENST00000528302 FAM26FQ5R3K3 315 aa10.82□□□□□ -0.68
SF3B2-206ENST00000528302 HGSNATQ68CP4 663 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms