RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 DNM1Q05193 864 aaKnown RBP18.68■□□□□ 0.58
CAPN1-205ENST00000526954 SDF4Q9BRK5 362 aa18.68■□□□□ 0.58
CAPN1-205ENST00000526954 FTOQ9C0B1 505 aaKnown RBP eCLIP18.68■□□□□ 0.58
CAPN1-205ENST00000526954 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.68■□□□□ 0.58
CAPN1-205ENST00000526954 UNC93B1Q9H1C4 597 aa18.68■□□□□ 0.58
CAPN1-205ENST00000526954 PAK6Q9NQU5 681 aaPredicted RBP18.68■□□□□ 0.58
CAPN1-205ENST00000526954 TFIP11Q9UBB9 837 aaKnown RBP18.68■□□□□ 0.58
CAPN1-205ENST00000526954 DDX20Q9UHI6 824 aaKnown RBP18.68■□□□□ 0.58
CAPN1-205ENST00000526954 CENPFP49454 3210 aa18.68■□□□□ 0.58
CAPN1-205ENST00000526954 FARP2O94887 1054 aaPredicted RBP18.67■□□□□ 0.58
CAPN1-205ENST00000526954 YEATS4O95619 227 aa18.67■□□□□ 0.58
CAPN1-205ENST00000526954 GGPS1O95749 300 aa18.67■□□□□ 0.58
CAPN1-205ENST00000526954 CCL5P13501 91 aa18.67■□□□□ 0.58
CAPN1-205ENST00000526954 NKX3-2P78367 333 aa18.67■□□□□ 0.58
CAPN1-205ENST00000526954 ARHGAP1Q07960 439 aa18.67■□□□□ 0.58
CAPN1-205ENST00000526954 LAMC2Q13753 1193 aa18.67■□□□□ 0.58
CAPN1-205ENST00000526954 SLC39A14Q15043 492 aa18.67■□□□□ 0.58
CAPN1-205ENST00000526954 MTFR1Q15390 333 aa18.67■□□□□ 0.58
CAPN1-205ENST00000526954 FOXD4L6Q3SYB3 417 aaPredicted RBP18.67■□□□□ 0.58
CAPN1-205ENST00000526954 LRCH2Q5VUJ6 765 aa18.67■□□□□ 0.58
CAPN1-205ENST00000526954 ARL6IP4Q66PJ3 421 aaKnown RBP18.67■□□□□ 0.58
CAPN1-205ENST00000526954 METTL7BQ6UX53 244 aa18.67■□□□□ 0.58
CAPN1-205ENST00000526954 FOXD4L3Q6VB84 417 aaPredicted RBP18.67■□□□□ 0.58
CAPN1-205ENST00000526954 DHX37Q8IY37 1157 aaKnown RBP18.67■□□□□ 0.58
CAPN1-205ENST00000526954 COPS5Q92905 334 aa18.67■□□□□ 0.58
CAPN1-205ENST00000526954 BCAS3Q9H6U6 928 aa18.67■□□□□ 0.58
CAPN1-205ENST00000526954 PKD2L1Q9P0L9 805 aa18.67■□□□□ 0.58
CAPN1-205ENST00000526954 POTEFA5A3E0 1075 aa18.66■□□□□ 0.58
CAPN1-205ENST00000526954 MARCH6O60337 910 aa18.66■□□□□ 0.58
CAPN1-205ENST00000526954 GAS7O60861 476 aa18.66■□□□□ 0.58
CAPN1-205ENST00000526954 RARBP10826 455 aa18.66■□□□□ 0.58
CAPN1-205ENST00000526954 KRT85P78386 507 aa18.66■□□□□ 0.58
CAPN1-205ENST00000526954 GJC2Q5T442 439 aaPredicted RBP18.66■□□□□ 0.58
CAPN1-205ENST00000526954 LHX8Q68G74 356 aa18.66■□□□□ 0.58
CAPN1-205ENST00000526954 B3GNT9Q6UX72 402 aa18.66■□□□□ 0.58
CAPN1-205ENST00000526954 CYFIP1Q7L576 1253 aa18.66■□□□□ 0.58
CAPN1-205ENST00000526954 TLK2Q86UE8 772 aa18.66■□□□□ 0.58
CAPN1-205ENST00000526954 LINC00301Q8NCQ3 95 aa18.66■□□□□ 0.58
CAPN1-205ENST00000526954 GJA10Q969M2 543 aa18.66■□□□□ 0.58
CAPN1-205ENST00000526954 UIMC1Q96RL1 719 aa18.66■□□□□ 0.58
CAPN1-205ENST00000526954 TEKT3Q9BXF9 490 aa18.66■□□□□ 0.58
CAPN1-205ENST00000526954 UPF3AQ9H1J1 476 aaKnown RBP18.66■□□□□ 0.58
CAPN1-205ENST00000526954 MLXIPQ9HAP2 919 aa18.66■□□□□ 0.58
CAPN1-205ENST00000526954 JPH1Q9HDC5 661 aaPredicted RBP18.66■□□□□ 0.58
CAPN1-205ENST00000526954 SLC9A2Q9UBY0 812 aa18.66■□□□□ 0.58
CAPN1-205ENST00000526954 PCDHA12Q9UN75 941 aa18.66■□□□□ 0.58
CAPN1-205ENST00000526954 WDR81Q562E7 1941 aa18.65■□□□□ 0.58
CAPN1-205ENST00000526954 DYNC1LI2O43237 492 aaPredicted RBP18.65■□□□□ 0.58
CAPN1-205ENST00000526954 TXKP42681 527 aa18.65■□□□□ 0.58
CAPN1-205ENST00000526954 GJA9P57773 515 aa18.65■□□□□ 0.58
CAPN1-205ENST00000526954 KRT76Q01546 638 aa18.65■□□□□ 0.58
CAPN1-205ENST00000526954 CEBPZQ03701 1054 aaKnown RBP18.65■□□□□ 0.58
CAPN1-205ENST00000526954 PPP2R5CQ13362 524 aa18.65■□□□□ 0.58
CAPN1-205ENST00000526954 OR6J1Q8NGC5 347 aa18.65■□□□□ 0.58
CAPN1-205ENST00000526954 TNPO1Q92973 898 aaKnown RBP18.65■□□□□ 0.58
CAPN1-205ENST00000526954 LENG1Q96BZ8 264 aaPredicted RBP18.65■□□□□ 0.58
CAPN1-205ENST00000526954 RNF208Q9H0X6 261 aa18.65■□□□□ 0.58
CAPN1-205ENST00000526954 TTC12Q9H892 705 aaPredicted RBP18.65■□□□□ 0.58
CAPN1-205ENST00000526954 RCOR1Q9UKL0 485 aa18.65■□□□□ 0.58
CAPN1-205ENST00000526954 VAV3Q9UKW4 847 aa18.65■□□□□ 0.58
CAPN1-205ENST00000526954 PPP6R2O75170 966 aa18.64■□□□□ 0.57
CAPN1-205ENST00000526954 PTGS1P23219 599 aa18.64■□□□□ 0.57
CAPN1-205ENST00000526954 FXR2P51116 673 aaKnown RBP eCLIP18.64■□□□□ 0.578e-7■■□□□ 13.8
CAPN1-205ENST00000526954 SPIRE1Q08AE8 756 aa18.64■□□□□ 0.57
CAPN1-205ENST00000526954 PDIA5Q14554 519 aa18.64■□□□□ 0.57
CAPN1-205ENST00000526954 STK38Q15208 465 aa18.64■□□□□ 0.57
CAPN1-205ENST00000526954 ZNF746Q6NUN9 644 aaPredicted RBP18.64■□□□□ 0.57
CAPN1-205ENST00000526954 PPTC7Q8NI37 304 aa18.64■□□□□ 0.57
CAPN1-205ENST00000526954 SPATA33Q96N06 139 aa18.64■□□□□ 0.57
CAPN1-205ENST00000526954 SCAND2PQ9GZW5 306 aaPredicted RBP18.64■□□□□ 0.57
CAPN1-205ENST00000526954 AP5M1Q9H0R1 490 aa18.64■□□□□ 0.57
CAPN1-205ENST00000526954 A6NJR5 290 aa18.63■□□□□ 0.57
CAPN1-205ENST00000526954 CTAGE5O15320 804 aa18.63■□□□□ 0.57
CAPN1-205ENST00000526954 ADAMTS4O75173 837 aa18.63■□□□□ 0.57
CAPN1-205ENST00000526954 ATG7O95352 703 aa18.63■□□□□ 0.57
CAPN1-205ENST00000526954 CCNE2O96020 404 aa18.63■□□□□ 0.57
CAPN1-205ENST00000526954 HOXD8P13378 290 aaPredicted RBP18.63■□□□□ 0.57
CAPN1-205ENST00000526954 IL17AQ16552 155 aa18.63■□□□□ 0.57
CAPN1-205ENST00000526954 DTHD1Q6ZMT9 781 aa18.63■□□□□ 0.57
CAPN1-205ENST00000526954 SMAP1Q8IYB5 467 aaPredicted RBP18.63■□□□□ 0.57
CAPN1-205ENST00000526954 RDM1Q8NG50 284 aa18.63■□□□□ 0.57
CAPN1-205ENST00000526954 FERMT2Q96AC1 680 aa18.63■□□□□ 0.57
CAPN1-205ENST00000526954 CHAMP1Q96JM3 812 aa18.63■□□□□ 0.57
CAPN1-205ENST00000526954 GPR20Q99678 358 aa18.63■□□□□ 0.57
CAPN1-205ENST00000526954 UNC45AQ9H3U1 944 aa18.63■□□□□ 0.57
CAPN1-205ENST00000526954 SPC25Q9HBM1 224 aa18.63■□□□□ 0.57
CAPN1-205ENST00000526954 XPNPEP3Q9NQH7 507 aa18.63■□□□□ 0.57
CAPN1-205ENST00000526954 SYNRGQ9UMZ2 1314 aa18.63■□□□□ 0.57
CAPN1-205ENST00000526954 DDX39AO00148 427 aaKnown RBP18.62■□□□□ 0.57
CAPN1-205ENST00000526954 SPTLC2O15270 562 aa18.62■□□□□ 0.57
CAPN1-205ENST00000526954 GJB1P08034 283 aa18.62■□□□□ 0.57
CAPN1-205ENST00000526954 CST5P28325 142 aaPredicted RBP18.62■□□□□ 0.57
CAPN1-205ENST00000526954 SFNP31947 248 aa18.62■□□□□ 0.57
CAPN1-205ENST00000526954 TECP42680 631 aa18.62■□□□□ 0.57
CAPN1-205ENST00000526954 ACTR2P61160 394 aa18.62■□□□□ 0.57
CAPN1-205ENST00000526954 TMEM266Q2M3C6 531 aa18.62■□□□□ 0.57
CAPN1-205ENST00000526954 HSDL1Q3SXM5 330 aa18.62■□□□□ 0.57
CAPN1-205ENST00000526954 CLEC17AQ6ZS10 378 aa18.62■□□□□ 0.57
CAPN1-205ENST00000526954 IGSF22Q8N9C0 903 aa18.62■□□□□ 0.57
CAPN1-205ENST00000526954 KLHDC9Q8NEP7 349 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms