RNA–Protein interactions for RNA: ENST00000526570.5

FGFR1-227, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 5,528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-227ENST00000526570 GPIHBP1Q8IV16 184 aa13.37□□□□□ -0.27
FGFR1-227ENST00000526570 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.37□□□□□ -0.27
FGFR1-227ENST00000526570 TRPM1Q7Z4N2 1603 aa13.37□□□□□ -0.27
FGFR1-227ENST00000526570 SSH2Q76I76 1423 aa13.37□□□□□ -0.27
FGFR1-227ENST00000526570 TCP10L2B9ZVM9 353 aa13.37□□□□□ -0.27
FGFR1-227ENST00000526570 TRIM16O95361 564 aa13.37□□□□□ -0.27
FGFR1-227ENST00000526570 TBC1D8O95759 1140 aa13.37□□□□□ -0.27
FGFR1-227ENST00000526570 SLC1A4P43007 532 aa13.37□□□□□ -0.27
FGFR1-227ENST00000526570 TBL3Q12788 808 aaKnown RBP13.37□□□□□ -0.27
FGFR1-227ENST00000526570 VSTM4Q8IW00 320 aa13.37□□□□□ -0.27
FGFR1-227ENST00000526570 GSPT2Q8IYD1 628 aaKnown RBP13.37□□□□□ -0.27
FGFR1-227ENST00000526570 KIRREL3Q8IZU9 778 aa13.37□□□□□ -0.27
FGFR1-227ENST00000526570 NUDCD1Q96RS6 583 aa13.37□□□□□ -0.27
FGFR1-227ENST00000526570 ELAC2Q9BQ52 826 aaKnown RBP13.37□□□□□ -0.27
FGFR1-227ENST00000526570 SEC31BQ9NQW1 1179 aa13.37□□□□□ -0.27
FGFR1-227ENST00000526570 BACH1O14867 736 aa13.37□□□□□ -0.27
FGFR1-227ENST00000526570 PFKFB2O60825 505 aa13.37□□□□□ -0.27
FGFR1-227ENST00000526570 MLH1P40692 756 aa13.37□□□□□ -0.27
FGFR1-227ENST00000526570 EMBQ6PCB8 327 aa13.37□□□□□ -0.27
FGFR1-227ENST00000526570 DTHD1Q6ZMT9 781 aa13.37□□□□□ -0.27
FGFR1-227ENST00000526570 MAPK8IP1Q9UQF2 711 aa13.37□□□□□ -0.27
FGFR1-227ENST00000526570 DEXIO95424 95 aa13.36□□□□□ -0.27
FGFR1-227ENST00000526570 CASP14P31944 242 aa13.36□□□□□ -0.27
FGFR1-227ENST00000526570 PPARAQ07869 468 aa13.36□□□□□ -0.27
FGFR1-227ENST00000526570 RBL2Q08999 1139 aa13.36□□□□□ -0.27
FGFR1-227ENST00000526570 DDX42Q86XP3 938 aaKnown RBP eCLIP13.36□□□□□ -0.27
FGFR1-227ENST00000526570 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.36□□□□□ -0.27
FGFR1-227ENST00000526570 EHD2Q9NZN4 543 aa13.36□□□□□ -0.27
FGFR1-227ENST00000526570 TRAF3IP3Q9Y228 551 aa13.36□□□□□ -0.27
FGFR1-227ENST00000526570 DIP2CQ9Y2E4 1556 aa13.36□□□□□ -0.27
FGFR1-227ENST00000526570 CYP27B1O15528 508 aa13.36□□□□□ -0.27
FGFR1-227ENST00000526570 SNX16P57768 344 aa13.36□□□□□ -0.27
FGFR1-227ENST00000526570 TFAP4Q01664 338 aa13.36□□□□□ -0.27
FGFR1-227ENST00000526570 BEND6Q5SZJ8 279 aaPredicted RBP13.36□□□□□ -0.27
FGFR1-227ENST00000526570 UHMK1Q8TAS1 419 aaKnown RBP13.36□□□□□ -0.27
FGFR1-227ENST00000526570 ATF5Q9Y2D1 282 aaPredicted RBP13.36□□□□□ -0.27
FGFR1-227ENST00000526570 KRIT1O00522 736 aa13.36□□□□□ -0.27
FGFR1-227ENST00000526570 IKBKBO14920 756 aa13.36□□□□□ -0.27
FGFR1-227ENST00000526570 DCTN3O75935 186 aa13.36□□□□□ -0.27
FGFR1-227ENST00000526570 STX3Q13277 289 aa13.36□□□□□ -0.27
FGFR1-227ENST00000526570 ZBTB41Q5SVQ8 909 aa13.36□□□□□ -0.27
FGFR1-227ENST00000526570 TOGARAM2Q6ZUX3 1019 aa13.36□□□□□ -0.27
FGFR1-227ENST00000526570 ANO5Q75V66 913 aa13.36□□□□□ -0.27
FGFR1-227ENST00000526570 ZNF473Q8WTR7 871 aaKnown RBP13.36□□□□□ -0.27
FGFR1-227ENST00000526570 USP28Q96RU2 1077 aa13.36□□□□□ -0.27
FGFR1-227ENST00000526570 ECT2Q9H8V3 914 aa13.36□□□□□ -0.27
FGFR1-227ENST00000526570 IFT122Q9HBG6 1241 aa13.36□□□□□ -0.27
FGFR1-227ENST00000526570 TMEM165Q9HC07 324 aa13.36□□□□□ -0.27
FGFR1-227ENST00000526570 XDHP47989 1333 aa13.36□□□□□ -0.27
FGFR1-227ENST00000526570 KCNK3O14649 394 aa13.36□□□□□ -0.27
FGFR1-227ENST00000526570 FAM13AO94988 1023 aa13.36□□□□□ -0.27
FGFR1-227ENST00000526570 NDUFA8P51970 172 aa13.36□□□□□ -0.27
FGFR1-227ENST00000526570 SLC7A5Q01650 507 aa13.36□□□□□ -0.27
FGFR1-227ENST00000526570 CFAP36Q96G28 342 aa13.36□□□□□ -0.27
FGFR1-227ENST00000526570 DLGAP2Q9P1A6 1054 aa13.36□□□□□ -0.27
FGFR1-227ENST00000526570 PDE6AP16499 860 aa13.35□□□□□ -0.27
FGFR1-227ENST00000526570 CCND1P24385 295 aa13.35□□□□□ -0.27
FGFR1-227ENST00000526570 ADORA1P30542 326 aa13.35□□□□□ -0.27
FGFR1-227ENST00000526570 MRPL28Q13084 256 aaKnown RBP13.35□□□□□ -0.27
FGFR1-227ENST00000526570 OTUD7BQ6GQQ9 843 aa13.35□□□□□ -0.27
FGFR1-227ENST00000526570 OPTNQ96CV9 577 aa13.35□□□□□ -0.27
FGFR1-227ENST00000526570 ARPP21Q9UBL0 812 aaPredicted RBP13.35□□□□□ -0.27
FGFR1-227ENST00000526570 TULP4Q9NRJ4 1543 aa13.35□□□□□ -0.27
FGFR1-227ENST00000526570 PLEKHG2Q9H7P9 1386 aa13.35□□□□□ -0.27
FGFR1-227ENST00000526570 LSM1O15116 133 aaKnown RBP13.35□□□□□ -0.27
FGFR1-227ENST00000526570 BUB1O43683 1085 aa13.35□□□□□ -0.27
FGFR1-227ENST00000526570 CARSP49589 748 aaKnown RBP13.35□□□□□ -0.27
FGFR1-227ENST00000526570 ASIC2Q16515 512 aa13.35□□□□□ -0.27
FGFR1-227ENST00000526570 PEX26Q7Z412 305 aa13.35□□□□□ -0.27
FGFR1-227ENST00000526570 FAM186BQ8IYM0 893 aa13.35□□□□□ -0.27
FGFR1-227ENST00000526570 ST13P5Q8NFI4 369 aaPredicted RBP13.35□□□□□ -0.27
FGFR1-227ENST00000526570 MIEF2Q96C03 454 aa13.35□□□□□ -0.27
FGFR1-227ENST00000526570 RUNDC3BQ96NL0 473 aa13.35□□□□□ -0.27
FGFR1-227ENST00000526570 E9PCH4 1651 aa13.35□□□□□ -0.27
FGFR1-227ENST00000526570 RASGRF2O14827 1237 aa13.35□□□□□ -0.27
FGFR1-227ENST00000526570 SERPINB1P30740 379 aa13.35□□□□□ -0.27
FGFR1-227ENST00000526570 KIF23Q02241 960 aaPredicted RBP13.35□□□□□ -0.27
FGFR1-227ENST00000526570 DPY19L2Q6NUT2 758 aa13.35□□□□□ -0.27
FGFR1-227ENST00000526570 PIK3AP1Q6ZUJ8 805 aa13.35□□□□□ -0.27
FGFR1-227ENST00000526570 MCF2L2Q86YR7 1114 aa13.35□□□□□ -0.27
FGFR1-227ENST00000526570 NELFBQ8WX92 580 aa13.35□□□□□ -0.27
FGFR1-227ENST00000526570 GMEB1Q9Y692 573 aa13.35□□□□□ -0.27
FGFR1-227ENST00000526570 BTDP43251 543 aa13.35□□□□□ -0.27
FGFR1-227ENST00000526570 USH1GQ495M9 461 aa13.35□□□□□ -0.27
FGFR1-227ENST00000526570 CCDC124Q96CT7 223 aaKnown RBP13.35□□□□□ -0.27
FGFR1-227ENST00000526570 EPN3Q9H201 632 aa13.35□□□□□ -0.27
FGFR1-227ENST00000526570 NDE1Q9NXR1 346 aa13.35□□□□□ -0.27
FGFR1-227ENST00000526570 PDP2Q9P2J9 529 aa13.35□□□□□ -0.27
FGFR1-227ENST00000526570 PHKA1P46020 1223 aa13.35□□□□□ -0.27
FGFR1-227ENST00000526570 AP2B1P63010 937 aa13.35□□□□□ -0.27
FGFR1-227ENST00000526570 KBTBD12Q3ZCT8 623 aa13.35□□□□□ -0.27
FGFR1-227ENST00000526570 UBE2Q1Q7Z7E8 422 aa13.35□□□□□ -0.27
FGFR1-227ENST00000526570 CPXCR1Q8N123 301 aa13.35□□□□□ -0.27
FGFR1-227ENST00000526570 CSGALNACT2Q8N6G5 542 aa13.35□□□□□ -0.27
FGFR1-227ENST00000526570 TRIM56Q9BRZ2 755 aaKnown RBP13.35□□□□□ -0.27
FGFR1-227ENST00000526570 CCPG1Q9ULG6 757 aa13.35□□□□□ -0.27
FGFR1-227ENST00000526570 USP17L12C9JPN9 530 aa13.34□□□□□ -0.27
FGFR1-227ENST00000526570 USP17L21D6R901 530 aa13.34□□□□□ -0.27
FGFR1-227ENST00000526570 PDE8BO95263 885 aa13.34□□□□□ -0.27
FGFR1-227ENST00000526570 NLRP10Q86W26 655 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms