RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 DNERQ8NFT8 737 aa7.39□□□□□ -1.23
CD44-214ENST00000525211 CCDC12Q8WUD4 166 aaPredicted RBP7.39□□□□□ -1.23
CD44-214ENST00000525211 HAS1Q92839 578 aa7.39□□□□□ -1.23
CD44-214ENST00000525211 MBOAT7Q96N66 472 aa7.39□□□□□ -1.23
CD44-214ENST00000525211 INPP4AQ96PE3 977 aaPredicted RBP7.39□□□□□ -1.23
CD44-214ENST00000525211 MXRA8Q9BRK3 442 aa7.39□□□□□ -1.23
CD44-214ENST00000525211 FAM117AQ9C073 453 aa7.39□□□□□ -1.23
CD44-214ENST00000525211 FOXP1Q9H334 677 aaPredicted RBP7.39□□□□□ -1.23
CD44-214ENST00000525211 JADE2Q9NQC1 790 aa7.39□□□□□ -1.23
CD44-214ENST00000525211 TFIP11Q9UBB9 837 aaKnown RBP7.39□□□□□ -1.23
CD44-214ENST00000525211 DAXXQ9UER7 740 aaPredicted RBP7.39□□□□□ -1.23
CD44-214ENST00000525211 ZHX1Q9UKY1 873 aaPredicted RBP7.39□□□□□ -1.23
CD44-214ENST00000525211 PNMA2Q9UL42 364 aa7.39□□□□□ -1.23
CD44-214ENST00000525211 DOCK5Q9H7D0 1870 aa7.38□□□□□ -1.23
CD44-214ENST00000525211 SYNGAP1Q96PV0 1343 aa7.38□□□□□ -1.23
CD44-214ENST00000525211 CYP3A7-CYP3A51PA0A087WV96 503 aa7.38□□□□□ -1.23
CD44-214ENST00000525211 RBM47A0AV96 593 aaKnown RBP7.38□□□□□ -1.23
CD44-214ENST00000525211 SPDYE3A6NKU9 549 aa7.38□□□□□ -1.23
CD44-214ENST00000525211 SPATA31C2B4DYI2 1134 aa7.38□□□□□ -1.23
CD44-214ENST00000525211 MSH4O15457 936 aa7.38□□□□□ -1.23
CD44-214ENST00000525211 DHX15O43143 795 aaKnown RBP7.38□□□□□ -1.23
CD44-214ENST00000525211 FOSP01100 380 aaPredicted RBP7.38□□□□□ -1.23
CD44-214ENST00000525211 HSP90AA1P07900 732 aaKnown RBP7.38□□□□□ -1.23
CD44-214ENST00000525211 KCNA2P16389 499 aa7.38□□□□□ -1.23
CD44-214ENST00000525211 CYP3A7P24462 503 aa7.38□□□□□ -1.23
CD44-214ENST00000525211 HOXD10P28358 340 aa7.38□□□□□ -1.23
CD44-214ENST00000525211 CCND2P30279 289 aa7.38□□□□□ -1.23
CD44-214ENST00000525211 STXBP2Q15833 593 aa7.38□□□□□ -1.23
CD44-214ENST00000525211 CCDC144BQ3MJ40 725 aa7.38□□□□□ -1.23
CD44-214ENST00000525211 PRR16Q569H4 304 aa7.38□□□□□ -1.23
CD44-214ENST00000525211 MYSM1Q5VVJ2 828 aa7.38□□□□□ -1.23
CD44-214ENST00000525211 LHX8Q68G74 356 aa7.38□□□□□ -1.23
CD44-214ENST00000525211 GALNT17Q6IS24 598 aa7.38□□□□□ -1.23
CD44-214ENST00000525211 FBXO46Q6PJ61 603 aaPredicted RBP7.38□□□□□ -1.23
CD44-214ENST00000525211 PLA2G4DQ86XP0 818 aa7.38□□□□□ -1.23
CD44-214ENST00000525211 SAMD3Q8N6K7 520 aa7.38□□□□□ -1.23
CD44-214ENST00000525211 ETNPPLQ8TBG4 499 aa7.38□□□□□ -1.23
CD44-214ENST00000525211 USP28Q96RU2 1077 aa7.38□□□□□ -1.23
CD44-214ENST00000525211 IWS1Q96ST2 819 aa7.38□□□□□ -1.23
CD44-214ENST00000525211 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.38□□□□□ -1.23
CD44-214ENST00000525211 MAP3K20Q9NYL2 800 aaKnown RBP7.38□□□□□ -1.23
CD44-214ENST00000525211 GNEQ9Y223 722 aaKnown RBP7.38□□□□□ -1.23
CD44-214ENST00000525211 KIAA1217Q5T5P2 1943 aa7.37□□□□□ -1.23
CD44-214ENST00000525211 A0A087WWV3 80 aa7.37□□□□□ -1.23
CD44-214ENST00000525211 CCDC194A0A1B0GVG4 234 aa7.37□□□□□ -1.23
CD44-214ENST00000525211 ASB14A6NK59 587 aa7.37□□□□□ -1.23
CD44-214ENST00000525211 DDX39AO00148 427 aaKnown RBP7.37□□□□□ -1.23
CD44-214ENST00000525211 EML1O00423 815 aa7.37□□□□□ -1.23
CD44-214ENST00000525211 EIF3JO75822 258 aaKnown RBP7.37□□□□□ -1.23
CD44-214ENST00000525211 CCNE2O96020 404 aa7.37□□□□□ -1.23
CD44-214ENST00000525211 PGK1P00558 417 aa7.37□□□□□ -1.23
CD44-214ENST00000525211 GNRH1P01148 92 aa7.37□□□□□ -1.23
CD44-214ENST00000525211 HMGCRP04035 888 aa7.37□□□□□ -1.23
CD44-214ENST00000525211 CCL5P13501 91 aa7.37□□□□□ -1.23
CD44-214ENST00000525211 XBP1P17861 261 aa7.37□□□□□ -1.23
CD44-214ENST00000525211 UBA1P22314 1058 aaKnown RBP7.37□□□□□ -1.23
CD44-214ENST00000525211 MCM7P33993 719 aa7.37□□□□□ -1.23
CD44-214ENST00000525211 BEX3Q00994 111 aa7.37□□□□□ -1.23
CD44-214ENST00000525211 CEBPZQ03701 1054 aaKnown RBP7.37□□□□□ -1.23
CD44-214ENST00000525211 DNM1Q05193 864 aaKnown RBP7.37□□□□□ -1.23
CD44-214ENST00000525211 ARHGAP1Q07960 439 aa7.37□□□□□ -1.23
CD44-214ENST00000525211 TRAF1Q13077 416 aa7.37□□□□□ -1.23
CD44-214ENST00000525211 PTPAQ15257 358 aa7.37□□□□□ -1.23
CD44-214ENST00000525211 CEP55Q53EZ4 464 aa7.37□□□□□ -1.23
CD44-214ENST00000525211 TTC38Q5R3I4 469 aa7.37□□□□□ -1.23
CD44-214ENST00000525211 MFSD14CQ5VZR4 134 aa7.37□□□□□ -1.23
CD44-214ENST00000525211 PADI6Q6TGC4 694 aa7.37□□□□□ -1.23
CD44-214ENST00000525211 NEK8Q86SG6 692 aa7.37□□□□□ -1.23
CD44-214ENST00000525211 BICD2Q8TD16 824 aa7.37□□□□□ -1.23
CD44-214ENST00000525211 PXYLP1Q8TE99 480 aa7.37□□□□□ -1.23
CD44-214ENST00000525211 ZNF333Q96JL9 665 aa7.37□□□□□ -1.23
CD44-214ENST00000525211 MTMR9Q96QG7 549 aa7.37□□□□□ -1.23
CD44-214ENST00000525211 PCYT2Q99447 389 aa7.37□□□□□ -1.23
CD44-214ENST00000525211 PHOX2BQ99453 314 aa7.37□□□□□ -1.23
CD44-214ENST00000525211 REPIN1Q9BWE0 567 aaKnown RBP7.37□□□□□ -1.23
CD44-214ENST00000525211 GDPD2Q9HCC8 539 aa7.37□□□□□ -1.23
CD44-214ENST00000525211 AGO4Q9HCK5 861 aaKnown RBP7.37□□□□□ -1.23
CD44-214ENST00000525211 KCNH7Q9NS40 1196 aa7.37□□□□□ -1.23
CD44-214ENST00000525211 ADD3Q9UEY8 706 aaKnown RBP7.37□□□□□ -1.23
CD44-214ENST00000525211 DDX41Q9UJV9 622 aaKnown RBP7.37□□□□□ -1.23
CD44-214ENST00000525211 MKI67P46013 3256 aaKnown RBP7.36□□□□□ -1.23
CD44-214ENST00000525211 PP2D1A8MPX8 630 aa7.36□□□□□ -1.23
CD44-214ENST00000525211 SNPHO15079 494 aa7.36□□□□□ -1.23
CD44-214ENST00000525211 DYNC1LI2O43237 492 aaPredicted RBP7.36□□□□□ -1.23
CD44-214ENST00000525211 CCNT1O60563 726 aaKnown RBP7.36□□□□□ -1.23
CD44-214ENST00000525211 PSMD10O75832 226 aa7.36□□□□□ -1.23
CD44-214ENST00000525211 CNGA1P29973 690 aa7.36□□□□□ -1.23
CD44-214ENST00000525211 ICAM3P32942 547 aa7.36□□□□□ -1.23
CD44-214ENST00000525211 USP11P51784 963 aa7.36□□□□□ -1.23
CD44-214ENST00000525211 PRMT2P55345 433 aa7.36□□□□□ -1.23
CD44-214ENST00000525211 SP4Q02446 784 aa7.36□□□□□ -1.23
CD44-214ENST00000525211 SPIRE1Q08AE8 756 aa7.36□□□□□ -1.23
CD44-214ENST00000525211 SAFBQ15424 915 aaKnown RBP eCLIP7.36□□□□□ -1.23
CD44-214ENST00000525211 HSDL1Q3SXM5 330 aa7.36□□□□□ -1.23
CD44-214ENST00000525211 SLC9C1Q4G0N8 1177 aa7.36□□□□□ -1.23
CD44-214ENST00000525211 Q4G0T1 1027 aa7.36□□□□□ -1.23
CD44-214ENST00000525211 B3GNT9Q6UX72 402 aa7.36□□□□□ -1.23
CD44-214ENST00000525211 USP49Q70CQ1 688 aa7.36□□□□□ -1.23
CD44-214ENST00000525211 FAM177A1Q8N128 213 aaPredicted RBP7.36□□□□□ -1.23
CD44-214ENST00000525211 LRRC15Q8TF66 581 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms