RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 GPR179Q6PRD1 2367 aa9.04□□□□□ -0.96
NEDD8-203ENST00000524927 DEAF1O75398 565 aaPredicted RBP9.03□□□□□ -0.96
NEDD8-203ENST00000524927 PPATQ06203 517 aa9.03□□□□□ -0.96
NEDD8-203ENST00000524927 C19orf57Q0VDD7 668 aa9.03□□□□□ -0.96
NEDD8-203ENST00000524927 TNFAIP1Q13829 316 aa9.03□□□□□ -0.96
NEDD8-203ENST00000524927 HGSNATQ68CP4 663 aa9.03□□□□□ -0.96
NEDD8-203ENST00000524927 LLGL2Q6P1M3 1020 aa9.03□□□□□ -0.96
NEDD8-203ENST00000524927 FBXO11Q86XK2 927 aa9.03□□□□□ -0.96
NEDD8-203ENST00000524927 PRSS33Q8NF86 280 aa9.03□□□□□ -0.96
NEDD8-203ENST00000524927 STK35Q8TDR2 534 aa9.03□□□□□ -0.96
NEDD8-203ENST00000524927 SENP6Q9GZR1 1112 aaPredicted RBP9.03□□□□□ -0.96
NEDD8-203ENST00000524927 VEZTQ9HBM0 779 aa9.03□□□□□ -0.96
NEDD8-203ENST00000524927 PCDHB5Q9Y5E4 795 aa9.03□□□□□ -0.96
NEDD8-203ENST00000524927 ECM29Q5VYK3 1845 aa9.03□□□□□ -0.96
NEDD8-203ENST00000524927 FAM186AA6NE01 2351 aa9.02□□□□□ -0.96
NEDD8-203ENST00000524927 CACNA1HO95180 2353 aa9.02□□□□□ -0.96
NEDD8-203ENST00000524927 TRANK1O15050 2925 aa9.02□□□□□ -0.96
NEDD8-203ENST00000524927 FSCN2O14926 492 aa9.02□□□□□ -0.97
NEDD8-203ENST00000524927 EIF4EBP3O60516 100 aaPredicted RBP9.02□□□□□ -0.97
NEDD8-203ENST00000524927 RTP1P59025 263 aa9.02□□□□□ -0.97
NEDD8-203ENST00000524927 AP3B2Q13367 1082 aa9.02□□□□□ -0.97
NEDD8-203ENST00000524927 GRIN3AQ8TCU5 1115 aa9.02□□□□□ -0.97
NEDD8-203ENST00000524927 UBXN4Q92575 508 aa9.02□□□□□ -0.97
NEDD8-203ENST00000524927 WNT8BQ93098 351 aa9.02□□□□□ -0.97
NEDD8-203ENST00000524927 EAF1Q96JC9 268 aaPredicted RBP9.02□□□□□ -0.97
NEDD8-203ENST00000524927 SOX17Q9H6I2 414 aaPredicted RBP9.02□□□□□ -0.97
NEDD8-203ENST00000524927 TRMT112Q9UI30 125 aaKnown RBP9.02□□□□□ -0.97
NEDD8-203ENST00000524927 MED19A0JLT2 244 aaPredicted RBP9.01□□□□□ -0.97
NEDD8-203ENST00000524927 CLRN2A0PK11 232 aa9.01□□□□□ -0.97
NEDD8-203ENST00000524927 HMOX1P09601 288 aa9.01□□□□□ -0.97
NEDD8-203ENST00000524927 CYP2C8P10632 490 aa9.01□□□□□ -0.97
NEDD8-203ENST00000524927 GARTP22102 1010 aa9.01□□□□□ -0.97
NEDD8-203ENST00000524927 GTF2F1P35269 517 aaKnown RBP eCLIP9.01□□□□□ -0.97
NEDD8-203ENST00000524927 RASIP1Q5U651 963 aa9.01□□□□□ -0.97
NEDD8-203ENST00000524927 NLRP10Q86W26 655 aa9.01□□□□□ -0.97
NEDD8-203ENST00000524927 TRIM42Q8IWZ5 723 aa9.01□□□□□ -0.97
NEDD8-203ENST00000524927 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.01□□□□□ -0.97
NEDD8-203ENST00000524927 KCNB2Q92953 911 aa9.01□□□□□ -0.97
NEDD8-203ENST00000524927 SPATA32Q96LK8 384 aa9.01□□□□□ -0.97
NEDD8-203ENST00000524927 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.01□□□□□ -0.975e-9■□□□□ 8.6
NEDD8-203ENST00000524927 NT5C1AQ9BXI3 368 aa9.01□□□□□ -0.97
NEDD8-203ENST00000524927 GOLGA2P5Q9HBQ8 144 aa9.01□□□□□ -0.97
NEDD8-203ENST00000524927 OSGEPQ9NPF4 335 aa9.01□□□□□ -0.97
NEDD8-203ENST00000524927 PRDM5Q9NQX1 630 aaPredicted RBP9.01□□□□□ -0.97
NEDD8-203ENST00000524927 XDHP47989 1333 aa9.01□□□□□ -0.97
NEDD8-203ENST00000524927 MED23Q9ULK4 1368 aa9□□□□□ -0.97
NEDD8-203ENST00000524927 KRTAP4-8A0A0G2JLE6 195 aa9□□□□□ -0.97
NEDD8-203ENST00000524927 DCXO43602 365 aa9□□□□□ -0.97
NEDD8-203ENST00000524927 GREM1O60565 184 aa9□□□□□ -0.97
NEDD8-203ENST00000524927 CYP11A1P05108 521 aa9□□□□□ -0.97
NEDD8-203ENST00000524927 ATF4P18848 351 aaPredicted RBP9□□□□□ -0.97
NEDD8-203ENST00000524927 EPHB4P54760 987 aa9□□□□□ -0.97
NEDD8-203ENST00000524927 APOBRQ0VD83 1088 aa9□□□□□ -0.97
NEDD8-203ENST00000524927 MOGSQ13724 837 aa9□□□□□ -0.97
NEDD8-203ENST00000524927 SEPT6Q14141 434 aa9□□□□□ -0.97
NEDD8-203ENST00000524927 HSP90AB3PQ58FF7 597 aa9□□□□□ -0.97
NEDD8-203ENST00000524927 RASGRP4Q8TDF6 673 aa9□□□□□ -0.97
NEDD8-203ENST00000524927 ZKSCAN4Q969J2 545 aaPredicted RBP9□□□□□ -0.97
NEDD8-203ENST00000524927 TEPSINQ96N21 525 aa9□□□□□ -0.97
NEDD8-203ENST00000524927 CORO1BQ9BR76 489 aa9□□□□□ -0.97
NEDD8-203ENST00000524927 UBP1Q9NZI7 540 aa9□□□□□ -0.97
NEDD8-203ENST00000524927 RRP7AQ9Y3A4 280 aaKnown RBP9□□□□□ -0.97
NEDD8-203ENST00000524927 FAM208BQ5VWN6 2430 aa9□□□□□ -0.97
NEDD8-203ENST00000524927 CHD7Q9P2D1 2997 aa9□□□□□ -0.97
NEDD8-203ENST00000524927 ATRNL1Q5VV63 1379 aa8.99□□□□□ -0.97
NEDD8-203ENST00000524927 DOCK3Q8IZD9 2030 aa8.99□□□□□ -0.97
NEDD8-203ENST00000524927 TLR3O15455 904 aaKnown RBP8.99□□□□□ -0.97
NEDD8-203ENST00000524927 ALX3O95076 343 aa8.99□□□□□ -0.97
NEDD8-203ENST00000524927 GSTP1P09211 210 aaKnown RBP8.99□□□□□ -0.97
NEDD8-203ENST00000524927 POU3F3P20264 500 aaPredicted RBP8.99□□□□□ -0.97
NEDD8-203ENST00000524927 POU4F3Q15319 338 aa8.99□□□□□ -0.97
NEDD8-203ENST00000524927 TTLL5Q6EMB2 1281 aa8.99□□□□□ -0.97
NEDD8-203ENST00000524927 BNC2Q6ZN30 1099 aaPredicted RBP8.99□□□□□ -0.97
NEDD8-203ENST00000524927 DHX38Q92620 1227 aaKnown RBP8.99□□□□□ -0.97
NEDD8-203ENST00000524927 NKD1Q969G9 470 aa8.99□□□□□ -0.97
NEDD8-203ENST00000524927 PRMT6Q96LA8 375 aaPredicted RBP8.99□□□□□ -0.97
NEDD8-203ENST00000524927 COA1Q9GZY4 146 aa8.99□□□□□ -0.97
NEDD8-203ENST00000524927 IRF2BPLQ9H1B7 796 aa8.99□□□□□ -0.97
NEDD8-203ENST00000524927 PDLIM7Q9NR12 457 aa8.99□□□□□ -0.97
NEDD8-203ENST00000524927 RNF112Q9ULX5 631 aa8.99□□□□□ -0.97
NEDD8-203ENST00000524927 EFR3BQ9Y2G0 817 aa8.99□□□□□ -0.97
NEDD8-203ENST00000524927 ATP11BQ9Y2G3 1177 aa8.99□□□□□ -0.97
NEDD8-203ENST00000524927 GVINP1Q7Z2Y8 2422 aa8.98□□□□□ -0.97
NEDD8-203ENST00000524927 F13A1P00488 732 aa8.98□□□□□ -0.97
NEDD8-203ENST00000524927 MYL6BP14649 208 aa8.98□□□□□ -0.97
NEDD8-203ENST00000524927 TCF15Q12870 199 aa8.98□□□□□ -0.97
NEDD8-203ENST00000524927 RAB30Q15771 203 aa8.98□□□□□ -0.97
NEDD8-203ENST00000524927 CFAP100Q494V2 611 aa8.98□□□□□ -0.97
NEDD8-203ENST00000524927 CCDC129Q6ZRS4 1044 aa8.98□□□□□ -0.97
NEDD8-203ENST00000524927 CCDC84Q86UT8 332 aaPredicted RBP8.98□□□□□ -0.97
NEDD8-203ENST00000524927 FAM178BQ8IXR5 827 aa8.98□□□□□ -0.97
NEDD8-203ENST00000524927 KLHL23Q8NBE8 558 aa8.98□□□□□ -0.97
NEDD8-203ENST00000524927 TRIB2Q92519 343 aa8.98□□□□□ -0.97
NEDD8-203ENST00000524927 ANKS1AQ92625 1134 aa8.98□□□□□ -0.97
NEDD8-203ENST00000524927 KLHDC7BQ96G42 594 aa8.98□□□□□ -0.97
NEDD8-203ENST00000524927 SEC16BQ96JE7 1060 aa8.98□□□□□ -0.97
NEDD8-203ENST00000524927 RPAP1Q9BWH6 1393 aaPredicted RBP8.98□□□□□ -0.97
NEDD8-203ENST00000524927 MAST4O15021 2626 aa8.97□□□□□ -0.97
NEDD8-203ENST00000524927 TRIM43BA6NCK2 446 aa8.97□□□□□ -0.97
NEDD8-203ENST00000524927 PROB1E7EW31 1015 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms