RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 PANK4Q9NVE7 773 aa9.17□□□□□ -0.94
CHD7-202ENST00000524602 RNF216Q9NWF9 866 aaPredicted RBP9.17□□□□□ -0.94
CHD7-202ENST00000524602 DAGLAQ9Y4D2 1042 aa9.17□□□□□ -0.94
CHD7-202ENST00000524602 GOLGA8KD6RF30 607 aa9.17□□□□□ -0.94
CHD7-202ENST00000524602 SHOX2O60902 331 aaPredicted RBP9.17□□□□□ -0.94
CHD7-202ENST00000524602 HOXA10P31260 410 aaPredicted RBP9.17□□□□□ -0.94
CHD7-202ENST00000524602 TNNI2P48788 182 aa9.17□□□□□ -0.94
CHD7-202ENST00000524602 CCDC40Q4G0X9 1142 aa9.17□□□□□ -0.94
CHD7-202ENST00000524602 ALS2CLQ60I27 953 aa9.17□□□□□ -0.94
CHD7-202ENST00000524602 GBP6Q6ZN66 633 aa9.17□□□□□ -0.94
CHD7-202ENST00000524602 EP400NLQ6ZTU2 488 aa9.17□□□□□ -0.94
CHD7-202ENST00000524602 ADGRF4Q8IZF3 695 aa9.17□□□□□ -0.94
CHD7-202ENST00000524602 GPATCH11Q8N954 259 aa9.17□□□□□ -0.94
CHD7-202ENST00000524602 CAVIN3Q969G5 261 aa9.17□□□□□ -0.94
CHD7-202ENST00000524602 STIM2Q9P246 746 aa9.17□□□□□ -0.94
CHD7-202ENST00000524602 PCDHA12Q9UN75 941 aa9.17□□□□□ -0.94
CHD7-202ENST00000524602 MYH4Q9Y623 1939 aa9.17□□□□□ -0.94
CHD7-202ENST00000524602 STK24Q9Y6E0 443 aa9.17□□□□□ -0.94
CHD7-202ENST00000524602 PITPNM2Q9BZ72 1349 aa9.17□□□□□ -0.94
CHD7-202ENST00000524602 GRID2IPA4D2P6 1211 aa9.17□□□□□ -0.94
CHD7-202ENST00000524602 ZBTB5O15062 677 aa9.17□□□□□ -0.94
CHD7-202ENST00000524602 NKRFO15226 690 aaKnown RBP eCLIP9.17□□□□□ -0.94
CHD7-202ENST00000524602 OPA1O60313 960 aa9.17□□□□□ -0.94
CHD7-202ENST00000524602 PHACTR2O75167 634 aa9.17□□□□□ -0.94
CHD7-202ENST00000524602 GGCXP38435 758 aa9.17□□□□□ -0.94
CHD7-202ENST00000524602 KCNMA1Q12791 1236 aa9.17□□□□□ -0.94
CHD7-202ENST00000524602 EDRF1Q3B7T1 1238 aa9.17□□□□□ -0.94
CHD7-202ENST00000524602 CFAP221Q4G0U5 840 aa9.17□□□□□ -0.94
CHD7-202ENST00000524602 MOXD1Q6UVY6 613 aa9.17□□□□□ -0.94
CHD7-202ENST00000524602 TBC1D16Q8TBP0 767 aa9.17□□□□□ -0.94
CHD7-202ENST00000524602 HAS1Q92839 578 aa9.17□□□□□ -0.94
CHD7-202ENST00000524602 TANGO6Q9C0B7 1094 aa9.17□□□□□ -0.94
CHD7-202ENST00000524602 ATF5Q9Y2D1 282 aaPredicted RBP9.17□□□□□ -0.94
CHD7-202ENST00000524602 ATP8B3O60423 1300 aa9.16□□□□□ -0.94
CHD7-202ENST00000524602 MYH10P35580 1976 aa9.16□□□□□ -0.94
CHD7-202ENST00000524602 BTNL10A8MVZ5 291 aa9.16□□□□□ -0.94
CHD7-202ENST00000524602 TRAF5O00463 557 aa9.16□□□□□ -0.94
CHD7-202ENST00000524602 MYCNP04198 464 aaPredicted RBP9.16□□□□□ -0.94
CHD7-202ENST00000524602 EPB41P11171 864 aaKnown RBP9.16□□□□□ -0.94
CHD7-202ENST00000524602 USP11P51784 963 aa9.16□□□□□ -0.94
CHD7-202ENST00000524602 C10orf76Q5T2E6 689 aa9.16□□□□□ -0.94
CHD7-202ENST00000524602 KCNK18Q7Z418 384 aa9.16□□□□□ -0.94
CHD7-202ENST00000524602 TEX2Q8IWB9 1127 aa9.16□□□□□ -0.94
CHD7-202ENST00000524602 FAM76AQ8TAV0 307 aa9.16□□□□□ -0.94
CHD7-202ENST00000524602 SMCR8Q8TEV9 937 aaPredicted RBP9.16□□□□□ -0.94
CHD7-202ENST00000524602 CRAMP1Q96RY5 1269 aa9.16□□□□□ -0.94
CHD7-202ENST00000524602 SERPINB13Q9UIV8 391 aa9.16□□□□□ -0.94
CHD7-202ENST00000524602 ATP6V0A2Q9Y487 856 aa9.16□□□□□ -0.94
CHD7-202ENST00000524602 CYP3A7-CYP3A51PA0A087WV96 503 aa9.16□□□□□ -0.94
CHD7-202ENST00000524602 AGPSO00116 658 aa9.16□□□□□ -0.94
CHD7-202ENST00000524602 CES2O00748 559 aa9.16□□□□□ -0.94
CHD7-202ENST00000524602 MARCH6O60337 910 aa9.16□□□□□ -0.94
CHD7-202ENST00000524602 PPFIA4O75335 1185 aa9.16□□□□□ -0.94
CHD7-202ENST00000524602 MYBL2P10244 700 aa9.16□□□□□ -0.94
CHD7-202ENST00000524602 AKR1B1P15121 316 aa9.16□□□□□ -0.94
CHD7-202ENST00000524602 CYP3A7P24462 503 aa9.16□□□□□ -0.94
CHD7-202ENST00000524602 PPFIA1Q13136 1202 aa9.16□□□□□ -0.94
CHD7-202ENST00000524602 FAM83BQ5T0W9 1011 aa9.16□□□□□ -0.94
CHD7-202ENST00000524602 LRRC31Q6UY01 552 aa9.16□□□□□ -0.94
CHD7-202ENST00000524602 DPP8Q6V1X1 898 aaPredicted RBP9.16□□□□□ -0.94
CHD7-202ENST00000524602 TRIM59Q8IWR1 403 aa9.16□□□□□ -0.94
CHD7-202ENST00000524602 SLFN12Q8IYM2 578 aa9.16□□□□□ -0.94
CHD7-202ENST00000524602 LRRC47Q8N1G4 583 aaKnown RBP9.16□□□□□ -0.94
CHD7-202ENST00000524602 SH3GL2Q99962 352 aa9.16□□□□□ -0.94
CHD7-202ENST00000524602 NUDT12Q9BQG2 462 aa9.16□□□□□ -0.94
CHD7-202ENST00000524602 LRRC1Q9BTT6 524 aa9.16□□□□□ -0.94
CHD7-202ENST00000524602 TLR10Q9BXR5 811 aa9.16□□□□□ -0.94
CHD7-202ENST00000524602 PSTPIP2Q9H939 334 aa9.16□□□□□ -0.94
CHD7-202ENST00000524602 AIPL1Q9NZN9 384 aa9.16□□□□□ -0.94
CHD7-202ENST00000524602 FEZ2Q9UHY8 353 aaPredicted RBP9.16□□□□□ -0.94
CHD7-202ENST00000524602 RRP15Q9Y3B9 282 aaKnown RBP9.16□□□□□ -0.94
CHD7-202ENST00000524602 PCDHA2Q9Y5H9 948 aa9.16□□□□□ -0.94
CHD7-202ENST00000524602 FRMD3A2A2Y4 597 aa9.15□□□□□ -0.94
CHD7-202ENST00000524602 MYO1CO00159 1063 aa9.15□□□□□ -0.94
CHD7-202ENST00000524602 APBA1Q02410 837 aa9.15□□□□□ -0.94
CHD7-202ENST00000524602 NAB2Q15742 525 aa9.15□□□□□ -0.94
CHD7-202ENST00000524602 TDRD12Q587J7 1177 aaKnown RBP9.15□□□□□ -0.94
CHD7-202ENST00000524602 KLHDC7AQ5VTJ3 777 aa9.15□□□□□ -0.94
CHD7-202ENST00000524602 NFRKBQ6P4R8 1299 aa9.15□□□□□ -0.94
CHD7-202ENST00000524602 COA1Q9GZY4 146 aa9.15□□□□□ -0.94
CHD7-202ENST00000524602 GPCPD1Q9NPB8 672 aa9.15□□□□□ -0.94
CHD7-202ENST00000524602 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.15□□□□□ -0.94
CHD7-202ENST00000524602 GOLGA6CA6NDK9 693 aa9.15□□□□□ -0.94
CHD7-202ENST00000524602 NOL4O94818 638 aa9.15□□□□□ -0.94
CHD7-202ENST00000524602 GOLGA6DP0CG33 693 aa9.15□□□□□ -0.94
CHD7-202ENST00000524602 ANXA13P27216 316 aa9.15□□□□□ -0.94
CHD7-202ENST00000524602 RASSF7Q02833 373 aa9.15□□□□□ -0.94
CHD7-202ENST00000524602 GFPT1Q06210 699 aaPredicted RBP9.15□□□□□ -0.94
CHD7-202ENST00000524602 SLC18A3Q16572 532 aa9.15□□□□□ -0.94
CHD7-202ENST00000524602 HAUS3Q68CZ6 603 aa9.15□□□□□ -0.94
CHD7-202ENST00000524602 C8orf74Q6P047 294 aa9.15□□□□□ -0.94
CHD7-202ENST00000524602 IFT20Q8IY31 132 aa9.15□□□□□ -0.94
CHD7-202ENST00000524602 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.15□□□□□ -0.94
CHD7-202ENST00000524602 CCDC17Q96LX7 622 aa9.15□□□□□ -0.94
CHD7-202ENST00000524602 MBOAT7Q96N66 472 aa9.15□□□□□ -0.94
CHD7-202ENST00000524602 RASSF4Q9H2L5 321 aa9.15□□□□□ -0.94
CHD7-202ENST00000524602 GOLGA6AQ9NYA3 693 aa9.15□□□□□ -0.94
CHD7-202ENST00000524602 POLLQ9UGP5 575 aa9.15□□□□□ -0.94
CHD7-202ENST00000524602 PCDHGC5Q9Y5F6 944 aa9.15□□□□□ -0.94
CHD7-202ENST00000524602 PPP1R11O60927 126 aaPredicted RBP9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms