RNA–Protein interactions for RNA: ENST00000524529.6

CNKSR1-209, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 4

Gene CNKSR1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-209ENST00000524529 MTCH2Q9Y6C9 303 aa11.14□□□□□ -0.63
CNKSR1-209ENST00000524529 SPATA31C2B4DYI2 1134 aa11.13□□□□□ -0.63
CNKSR1-209ENST00000524529 SH2B2O14492 632 aaPredicted RBP11.13□□□□□ -0.63
CNKSR1-209ENST00000524529 LGALS2P05162 132 aa11.13□□□□□ -0.63
CNKSR1-209ENST00000524529 TGFB3P10600 412 aa11.13□□□□□ -0.63
CNKSR1-209ENST00000524529 TFF2Q03403 129 aa11.13□□□□□ -0.63
CNKSR1-209ENST00000524529 NECTIN1Q15223 517 aa11.13□□□□□ -0.63
CNKSR1-209ENST00000524529 RNF20Q5VTR2 975 aa11.13□□□□□ -0.63
CNKSR1-209ENST00000524529 CREB3L3Q68CJ9 461 aa11.13□□□□□ -0.63
CNKSR1-209ENST00000524529 CNKSR3Q6P9H4 555 aa11.13□□□□□ -0.63
CNKSR1-209ENST00000524529 KCNV1Q6PIU1 500 aa11.13□□□□□ -0.63
CNKSR1-209ENST00000524529 RAB11FIP4Q86YS3 637 aa11.13□□□□□ -0.63
CNKSR1-209ENST00000524529 MICALL1Q8N3F8 863 aa11.13□□□□□ -0.63
CNKSR1-209ENST00000524529 CCDC155Q8N6L0 562 aa11.13□□□□□ -0.63
CNKSR1-209ENST00000524529 ATXN2LQ8WWM7 1075 aaKnown RBP11.13□□□□□ -0.63
CNKSR1-209ENST00000524529 MAP3K14Q99558 947 aa11.13□□□□□ -0.63
CNKSR1-209ENST00000524529 XIRP2A4UGR9 3374 aa11.13□□□□□ -0.63
CNKSR1-209ENST00000524529 ATG2AQ2TAZ0 1938 aa11.13□□□□□ -0.63
CNKSR1-209ENST00000524529 NLRC5Q86WI3 1866 aa11.12□□□□□ -0.63
CNKSR1-209ENST00000524529 hCG_1642624A0A1W2PR95 340 aa11.12□□□□□ -0.63
CNKSR1-209ENST00000524529 TNFRSF10AO00220 468 aa11.12□□□□□ -0.63
CNKSR1-209ENST00000524529 TREHO43280 583 aa11.12□□□□□ -0.63
CNKSR1-209ENST00000524529 PRC1O43663 620 aa11.12□□□□□ -0.63
CNKSR1-209ENST00000524529 DDAH1O94760 285 aa11.12□□□□□ -0.63
CNKSR1-209ENST00000524529 COL9A1P20849 921 aa11.12□□□□□ -0.63
CNKSR1-209ENST00000524529 GRB10Q13322 594 aa11.12□□□□□ -0.63
CNKSR1-209ENST00000524529 SART3Q15020 963 aaKnown RBP11.12□□□□□ -0.63
CNKSR1-209ENST00000524529 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.12□□□□□ -0.63
CNKSR1-209ENST00000524529 CYFIP1Q7L576 1253 aa11.12□□□□□ -0.63
CNKSR1-209ENST00000524529 SERINC5Q86VE9 423 aa11.12□□□□□ -0.63
CNKSR1-209ENST00000524529 TRIM50Q86XT4 487 aa11.12□□□□□ -0.63
CNKSR1-209ENST00000524529 ARNTL2Q8WYA1 636 aa11.12□□□□□ -0.63
CNKSR1-209ENST00000524529 GPR20Q99678 358 aa11.12□□□□□ -0.63
CNKSR1-209ENST00000524529 LRRC2Q9BYS8 371 aa11.12□□□□□ -0.63
CNKSR1-209ENST00000524529 RNPEPQ9H4A4 650 aa11.12□□□□□ -0.63
CNKSR1-209ENST00000524529 MLXIPQ9HAP2 919 aa11.12□□□□□ -0.63
CNKSR1-209ENST00000524529 H3BRB1 525 aa11.11□□□□□ -0.63
CNKSR1-209ENST00000524529 PIK3CDO00329 1044 aa11.11□□□□□ -0.63
CNKSR1-209ENST00000524529 TLL1O43897 1013 aa11.11□□□□□ -0.63
CNKSR1-209ENST00000524529 ATP9AO75110 1047 aa11.11□□□□□ -0.63
CNKSR1-209ENST00000524529 GJB5O95377 273 aa11.11□□□□□ -0.63
CNKSR1-209ENST00000524529 SMIM10L2AP0DMW4 78 aa11.11□□□□□ -0.63
CNKSR1-209ENST00000524529 SMIM10L2BP0DMW5 78 aa11.11□□□□□ -0.63
CNKSR1-209ENST00000524529 SMARCA1P28370 1054 aa11.11□□□□□ -0.63
CNKSR1-209ENST00000524529 ADAM17P78536 824 aa11.11□□□□□ -0.63
CNKSR1-209ENST00000524529 TSGA10IPQ3SY00 556 aa11.11□□□□□ -0.63
CNKSR1-209ENST00000524529 METTL7BQ6UX53 244 aa11.11□□□□□ -0.63
CNKSR1-209ENST00000524529 DBF4BQ8NFT6 615 aa11.11□□□□□ -0.63
CNKSR1-209ENST00000524529 NECAB3Q96P71 396 aaPredicted RBP11.11□□□□□ -0.63
CNKSR1-209ENST00000524529 MTA3Q9BTC8 594 aa11.11□□□□□ -0.63
CNKSR1-209ENST00000524529 USP26Q9BXU7 913 aa11.11□□□□□ -0.63
CNKSR1-209ENST00000524529 TUT1Q9H6E5 874 aaKnown RBP11.11□□□□□ -0.63
CNKSR1-209ENST00000524529 ABHD14A-ACY1A0A1B0GW23 586 aa11.1□□□□□ -0.63
CNKSR1-209ENST00000524529 C17orf102A2RUQ5 167 aa11.1□□□□□ -0.63
CNKSR1-209ENST00000524529 KIF28PB7ZC32 967 aa11.1□□□□□ -0.63
CNKSR1-209ENST00000524529 FIBPO43427 364 aa11.1□□□□□ -0.63
CNKSR1-209ENST00000524529 LGR5O75473 907 aa11.1□□□□□ -0.63
CNKSR1-209ENST00000524529 PARNO95453 639 aaKnown RBP11.1□□□□□ -0.63
CNKSR1-209ENST00000524529 BMP1P13497 986 aa11.1□□□□□ -0.63
CNKSR1-209ENST00000524529 MCM5P33992 734 aa11.1□□□□□ -0.63
CNKSR1-209ENST00000524529 THPOP40225 353 aa11.1□□□□□ -0.63
CNKSR1-209ENST00000524529 KCNJ6P48051 423 aa11.1□□□□□ -0.63
CNKSR1-209ENST00000524529 KCNQ1P51787 676 aa11.1□□□□□ -0.63
CNKSR1-209ENST00000524529 MRPS5P82675 430 aaKnown RBP11.1□□□□□ -0.63
CNKSR1-209ENST00000524529 TRAF1Q13077 416 aa11.1□□□□□ -0.63
CNKSR1-209ENST00000524529 KRT32Q14532 448 aa11.1□□□□□ -0.63
CNKSR1-209ENST00000524529 C8orf34Q49A92 452 aa11.1□□□□□ -0.63
CNKSR1-209ENST00000524529 PCNX4Q63HM2 1172 aa11.1□□□□□ -0.63
CNKSR1-209ENST00000524529 RASEFQ8IZ41 740 aa11.1□□□□□ -0.63
CNKSR1-209ENST00000524529 CTCFLQ8NI51 663 aaPredicted RBP11.1□□□□□ -0.63
CNKSR1-209ENST00000524529 SMARCC2Q8TAQ2 1214 aa11.1□□□□□ -0.63
CNKSR1-209ENST00000524529 ADAMTS19Q8TE59 1207 aa11.1□□□□□ -0.63
CNKSR1-209ENST00000524529 GDPD5Q8WTR4 605 aa11.1□□□□□ -0.63
CNKSR1-209ENST00000524529 KCNB2Q92953 911 aa11.1□□□□□ -0.63
CNKSR1-209ENST00000524529 ATP6V0A1Q93050 837 aa11.1□□□□□ -0.63
CNKSR1-209ENST00000524529 RRP36Q96EU6 259 aaKnown RBP11.1□□□□□ -0.63
CNKSR1-209ENST00000524529 TMEM87BQ96K49 555 aa11.1□□□□□ -0.63
CNKSR1-209ENST00000524529 SETD4Q9NVD3 440 aa11.1□□□□□ -0.63
CNKSR1-209ENST00000524529 WDR81Q562E7 1941 aa11.09□□□□□ -0.63
CNKSR1-209ENST00000524529 TTC3P53804 2025 aa11.09□□□□□ -0.63
CNKSR1-209ENST00000524529 EVPLQ92817 2033 aa11.09□□□□□ -0.63
CNKSR1-209ENST00000524529 LINC01553A4QN01 128 aa11.09□□□□□ -0.63
CNKSR1-209ENST00000524529 RSPH10B2B2RC85 870 aa11.09□□□□□ -0.63
CNKSR1-209ENST00000524529 STAM2O75886 525 aa11.09□□□□□ -0.63
CNKSR1-209ENST00000524529 RSPH10BP0C881 870 aa11.09□□□□□ -0.63
CNKSR1-209ENST00000524529 KCNA2P16389 499 aa11.09□□□□□ -0.63
CNKSR1-209ENST00000524529 ITGB5P18084 799 aa11.09□□□□□ -0.63
CNKSR1-209ENST00000524529 KIF5BP33176 963 aa11.09□□□□□ -0.63
CNKSR1-209ENST00000524529 HSPA4P34932 840 aa11.09□□□□□ -0.63
CNKSR1-209ENST00000524529 LIFRP42702 1097 aa11.09□□□□□ -0.63
CNKSR1-209ENST00000524529 SP4Q02446 784 aa11.09□□□□□ -0.63
CNKSR1-209ENST00000524529 NEDD9Q14511 834 aa11.09□□□□□ -0.63
CNKSR1-209ENST00000524529 UBE2SQ16763 222 aa11.09□□□□□ -0.63
CNKSR1-209ENST00000524529 ADCK5Q3MIX3 580 aa11.09□□□□□ -0.63
CNKSR1-209ENST00000524529 GNPTABQ3T906 1256 aa11.09□□□□□ -0.63
CNKSR1-209ENST00000524529 PLEKHG4Q58EX7 1191 aa11.09□□□□□ -0.63
CNKSR1-209ENST00000524529 TYW1BQ6NUM6 668 aa11.09□□□□□ -0.63
CNKSR1-209ENST00000524529 FAM117BQ6P1L5 589 aa11.09□□□□□ -0.63
CNKSR1-209ENST00000524529 TMTC3Q6ZXV5 915 aa11.09□□□□□ -0.63
CNKSR1-209ENST00000524529 CCDC82Q8N4S0 544 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms