RNA–Protein interactions for RNA: ENST00000523240.5

HDAC2-214, Transcript of histone deacetylase 2, humanhuman

TSL 5

Gene HDAC2, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-214ENST00000523240 CYP2C18P33260 490 aa25.7■■□□□ 1.7
HDAC2-214ENST00000523240 SCRN1Q12765 414 aa25.7■■□□□ 1.7
HDAC2-214ENST00000523240 KIAA0753Q2KHM9 967 aa25.7■■□□□ 1.7
HDAC2-214ENST00000523240 KAT2BQ92831 832 aa25.7■■□□□ 1.7
HDAC2-214ENST00000523240 IL17RAQ96F46 866 aa25.7■■□□□ 1.7
HDAC2-214ENST00000523240 MXRA8Q9BRK3 442 aa25.7■■□□□ 1.7
HDAC2-214ENST00000523240 CYP2C9P11712 490 aa25.69■■□□□ 1.7
HDAC2-214ENST00000523240 HOXD8P13378 290 aaPredicted RBP25.69■■□□□ 1.7
HDAC2-214ENST00000523240 ARHGAP4P98171 946 aa25.69■■□□□ 1.7
HDAC2-214ENST00000523240 NOC4LQ9BVI4 516 aaKnown RBP25.69■■□□□ 1.7
HDAC2-214ENST00000523240 BCAS3Q9H6U6 928 aa25.69■■□□□ 1.7
HDAC2-214ENST00000523240 RANBP2P49792 3224 aaKnown RBP25.69■■□□□ 1.7
HDAC2-214ENST00000523240 KAT6AQ92794 2004 aa25.68■■□□□ 1.7
HDAC2-214ENST00000523240 LGALS2P05162 132 aa25.68■■□□□ 1.7
HDAC2-214ENST00000523240 PTGISQ16647 500 aa25.68■■□□□ 1.7
HDAC2-214ENST00000523240 CEP55Q53EZ4 464 aa25.68■■□□□ 1.7
HDAC2-214ENST00000523240 ZNF215Q9UL58 517 aaPredicted RBP25.68■■□□□ 1.7
HDAC2-214ENST00000523240 CSF2RAP15509 400 aa25.67■■□□□ 1.7
HDAC2-214ENST00000523240 KCNA2P16389 499 aa25.67■■□□□ 1.7
HDAC2-214ENST00000523240 XBP1P17861 261 aa25.67■■□□□ 1.7
HDAC2-214ENST00000523240 CCL23P55773 120 aa25.67■■□□□ 1.7
HDAC2-214ENST00000523240 SHHQ15465 462 aa25.67■■□□□ 1.7
HDAC2-214ENST00000523240 UTP14CQ5TAP6 766 aaKnown RBP25.67■■□□□ 1.7
HDAC2-214ENST00000523240 SESTD1Q86VW0 696 aa25.67■■□□□ 1.7
HDAC2-214ENST00000523240 CCDC155Q8N6L0 562 aa25.67■■□□□ 1.7
HDAC2-214ENST00000523240 GPR20Q99678 358 aa25.67■■□□□ 1.7
HDAC2-214ENST00000523240 SDF4Q9BRK5 362 aa25.67■■□□□ 1.7
HDAC2-214ENST00000523240 UPF2Q9HAU5 1272 aaKnown RBP25.67■■□□□ 1.7
HDAC2-214ENST00000523240 KCNH7Q9NS40 1196 aa25.67■■□□□ 1.7
HDAC2-214ENST00000523240 HDAC6Q9UBN7 1215 aa25.67■■□□□ 1.7
HDAC2-214ENST00000523240 TRIP12Q14669 1992 aaPredicted RBP25.67■■□□□ 1.7
HDAC2-214ENST00000523240 H3BRB1 525 aa25.66■■□□□ 1.7
HDAC2-214ENST00000523240 ATP9AO75110 1047 aa25.66■■□□□ 1.7
HDAC2-214ENST00000523240 LRIT3Q3SXY7 679 aa25.66■■□□□ 1.7
HDAC2-214ENST00000523240 C9orf50Q5SZB4 431 aa25.66■■□□□ 1.7
HDAC2-214ENST00000523240 RETREG2Q8NC44 543 aa25.66■■□□□ 1.7
HDAC2-214ENST00000523240 RASGRP4Q8TDF6 673 aa25.66■■□□□ 1.7
HDAC2-214ENST00000523240 RNPC3Q96LT9 517 aaKnown RBP25.66■■□□□ 1.7
HDAC2-214ENST00000523240 TUT1Q9H6E5 874 aaKnown RBP25.66■■□□□ 1.7
HDAC2-214ENST00000523240 GTF2IRD1Q9UHL9 959 aa25.66■■□□□ 1.7
HDAC2-214ENST00000523240 UMODL1Q5DID0 1318 aa25.65■■□□□ 1.7
HDAC2-214ENST00000523240 STK36Q9NRP7 1315 aa25.65■■□□□ 1.7
HDAC2-214ENST00000523240 HAS3O00219 553 aa25.65■■□□□ 1.7
HDAC2-214ENST00000523240 BFSP2Q13515 415 aa25.65■■□□□ 1.7
HDAC2-214ENST00000523240 GDF6Q6KF10 455 aaPredicted RBP25.65■■□□□ 1.7
HDAC2-214ENST00000523240 CYP2W1Q8TAV3 490 aa25.65■■□□□ 1.7
HDAC2-214ENST00000523240 C16orf70Q9BSU1 422 aa25.65■■□□□ 1.7
HDAC2-214ENST00000523240 JPH1Q9HDC5 661 aaPredicted RBP25.65■■□□□ 1.7
HDAC2-214ENST00000523240 EPHB4P54760 987 aa25.64■■□□□ 1.7
HDAC2-214ENST00000523240 PLA2G4DQ86XP0 818 aa25.64■■□□□ 1.7
HDAC2-214ENST00000523240 FAM177A1Q8N128 213 aaPredicted RBP25.64■■□□□ 1.7
HDAC2-214ENST00000523240 NECAB1Q8N987 351 aa25.64■■□□□ 1.7
HDAC2-214ENST00000523240 SEPT1Q8WYJ6 367 aa25.64■■□□□ 1.7
HDAC2-214ENST00000523240 C22orf23Q9BZE7 217 aa25.64■■□□□ 1.7
HDAC2-214ENST00000523240 PCDHA4Q9UN74 947 aa25.64■■□□□ 1.7
HDAC2-214ENST00000523240 TANC1Q9C0D5 1861 aa25.64■■□□□ 1.69
HDAC2-214ENST00000523240 ARP10275 920 aa25.63■■□□□ 1.69
HDAC2-214ENST00000523240 TCF7P36402 384 aaPredicted RBP25.63■■□□□ 1.69
HDAC2-214ENST00000523240 ME3Q16798 604 aa25.63■■□□□ 1.69
HDAC2-214ENST00000523240 PSRC1Q6PGN9 363 aaPredicted RBP25.63■■□□□ 1.69
HDAC2-214ENST00000523240 NIPA1Q7RTP0 329 aa25.63■■□□□ 1.69
HDAC2-214ENST00000523240 TRIM50Q86XT4 487 aa25.63■■□□□ 1.69
HDAC2-214ENST00000523240 WASF1Q92558 559 aa25.63■■□□□ 1.69
HDAC2-214ENST00000523240 GTF3C6Q969F1 213 aa25.63■■□□□ 1.69
HDAC2-214ENST00000523240 LRCH3Q96II8 777 aa25.63■■□□□ 1.69
HDAC2-214ENST00000523240 AIFM3Q96NN9 605 aa25.63■■□□□ 1.69
HDAC2-214ENST00000523240 ORC3Q9UBD5 711 aaPredicted RBP25.63■■□□□ 1.69
HDAC2-214ENST00000523240 SLC9A2Q9UBY0 812 aa25.63■■□□□ 1.69
HDAC2-214ENST00000523240 TCEAL9Q9UHQ7 104 aa25.63■■□□□ 1.69
HDAC2-214ENST00000523240 MEIS1O00470 390 aa25.62■■□□□ 1.69
HDAC2-214ENST00000523240 SOX1O00570 391 aaPredicted RBP25.62■■□□□ 1.69
HDAC2-214ENST00000523240 ADAMTS3O15072 1205 aa25.62■■□□□ 1.69
HDAC2-214ENST00000523240 CYP3A4P08684 503 aa25.62■■□□□ 1.69
HDAC2-214ENST00000523240 ACRP10323 421 aa25.62■■□□□ 1.69
HDAC2-214ENST00000523240 SETQ01105 290 aaPredicted RBP25.62■■□□□ 1.69
HDAC2-214ENST00000523240 GALNT17Q6IS24 598 aa25.62■■□□□ 1.69
HDAC2-214ENST00000523240 BLIDQ8IZY5 108 aa25.62■■□□□ 1.69
HDAC2-214ENST00000523240 SCLYQ96I15 445 aa25.62■■□□□ 1.69
HDAC2-214ENST00000523240 WNT8AQ9H1J5 351 aa25.62■■□□□ 1.69
HDAC2-214ENST00000523240 AGO4Q9HCK5 861 aaKnown RBP25.62■■□□□ 1.69
HDAC2-214ENST00000523240 IL23AQ9NPF7 189 aa25.62■■□□□ 1.69
HDAC2-214ENST00000523240 NFASCO94856 1347 aa25.62■■□□□ 1.69
HDAC2-214ENST00000523240 SCN5AQ14524 2016 aa25.61■■□□□ 1.69
HDAC2-214ENST00000523240 C17orf102A2RUQ5 167 aa25.61■■□□□ 1.69
HDAC2-214ENST00000523240 PITPNM1O00562 1244 aa25.61■■□□□ 1.69
HDAC2-214ENST00000523240 LARGE1O95461 756 aa25.61■■□□□ 1.69
HDAC2-214ENST00000523240 RPUSD2Q8IZ73 545 aaKnown RBP25.61■■□□□ 1.69
HDAC2-214ENST00000523240 CAGE1Q8TC20 777 aa25.61■■□□□ 1.69
HDAC2-214ENST00000523240 GLG1Q92896 1179 aa25.61■■□□□ 1.69
HDAC2-214ENST00000523240 BUD13Q9BRD0 619 aaKnown RBP eCLIP25.61■■□□□ 1.692e-14■□□□□ 10.3
HDAC2-214ENST00000523240 MTIF3Q9H2K0 278 aaKnown RBP25.61■■□□□ 1.69
HDAC2-214ENST00000523240 FAM86B1E9PN63 330 aa25.6■■□□□ 1.69
HDAC2-214ENST00000523240 FAM86B2P0C5J1 330 aa25.6■■□□□ 1.69
HDAC2-214ENST00000523240 SMIM10L2AP0DMW4 78 aa25.6■■□□□ 1.69
HDAC2-214ENST00000523240 SMIM10L2BP0DMW5 78 aa25.6■■□□□ 1.69
HDAC2-214ENST00000523240 AZI2Q9H6S1 392 aa25.6■■□□□ 1.69
HDAC2-214ENST00000523240 TELO2Q9Y4R8 837 aa25.6■■□□□ 1.69
HDAC2-214ENST00000523240 DDX39AO00148 427 aaKnown RBP25.59■■□□□ 1.69
HDAC2-214ENST00000523240 GNAT1P11488 350 aa25.59■■□□□ 1.69
HDAC2-214ENST00000523240 PRR16Q569H4 304 aa25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms