RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 C17orf102A2RUQ5 167 aa17.83■□□□□ 0.44
MRPS28-209ENST00000522987 H3BRB1 525 aa17.83■□□□□ 0.44
MRPS28-209ENST00000522987 NOP56O00567 594 aaKnown RBP17.83■□□□□ 0.44
MRPS28-209ENST00000522987 SGSM2O43147 1006 aa17.83■□□□□ 0.44
MRPS28-209ENST00000522987 TREHO43280 583 aa17.83■□□□□ 0.44
MRPS28-209ENST00000522987 SMIM10L2AP0DMW4 78 aa17.83■□□□□ 0.44
MRPS28-209ENST00000522987 SMIM10L2BP0DMW5 78 aa17.83■□□□□ 0.44
MRPS28-209ENST00000522987 HOXD8P13378 290 aaPredicted RBP17.83■□□□□ 0.44
MRPS28-209ENST00000522987 COL9A1P20849 921 aa17.83■□□□□ 0.44
MRPS28-209ENST00000522987 SEMA3FQ13275 785 aa17.83■□□□□ 0.44
MRPS28-209ENST00000522987 MB21D2Q8IYB1 491 aaPredicted RBP17.83■□□□□ 0.44
MRPS28-209ENST00000522987 DBF4BQ8NFT6 615 aa17.83■□□□□ 0.44
MRPS28-209ENST00000522987 TUT1Q9H6E5 874 aaKnown RBP17.83■□□□□ 0.44
MRPS28-209ENST00000522987 MAP3K20Q9NYL2 800 aaKnown RBP17.83■□□□□ 0.44
MRPS28-209ENST00000522987 ATG2AQ2TAZ0 1938 aa17.82■□□□□ 0.44
MRPS28-209ENST00000522987 ABHD14A-ACY1A0A1B0GW23 586 aa17.82■□□□□ 0.44
MRPS28-209ENST00000522987 LINC01553A4QN01 128 aa17.82■□□□□ 0.44
MRPS28-209ENST00000522987 RSPH10B2B2RC85 870 aa17.82■□□□□ 0.44
MRPS28-209ENST00000522987 LGR5O75473 907 aa17.82■□□□□ 0.44
MRPS28-209ENST00000522987 GJB5O95377 273 aa17.82■□□□□ 0.44
MRPS28-209ENST00000522987 PLEKHA8P1O95397 391 aa17.82■□□□□ 0.44
MRPS28-209ENST00000522987 RSPH10BP0C881 870 aa17.82■□□□□ 0.44
MRPS28-209ENST00000522987 ZNF654Q8IZM8 581 aa17.82■□□□□ 0.44
MRPS28-209ENST00000522987 MYOCDQ8IZQ8 938 aa17.82■□□□□ 0.44
MRPS28-209ENST00000522987 SMARCC2Q8TAQ2 1214 aa17.82■□□□□ 0.44
MRPS28-209ENST00000522987 IGDCC4Q8TDY8 1250 aa17.82■□□□□ 0.44
MRPS28-209ENST00000522987 RNPEPQ9H4A4 650 aa17.82■□□□□ 0.44
MRPS28-209ENST00000522987 SETD4Q9NVD3 440 aa17.82■□□□□ 0.44
MRPS28-209ENST00000522987 NFXL1Q6ZNB6 911 aa17.81■□□□□ 0.44
MRPS28-209ENST00000522987 SERINC5Q86VE9 423 aa17.81■□□□□ 0.44
MRPS28-209ENST00000522987 RAD9AQ99638 391 aa17.81■□□□□ 0.44
MRPS28-209ENST00000522987 C17orf80Q9BSJ5 609 aa17.81■□□□□ 0.44
MRPS28-209ENST00000522987 LRRC2Q9BYS8 371 aa17.81■□□□□ 0.44
MRPS28-209ENST00000522987 SUGCTQ9HAC7 445 aa17.81■□□□□ 0.44
MRPS28-209ENST00000522987 LY9Q9HBG7 655 aa17.81■□□□□ 0.44
MRPS28-209ENST00000522987 PKD2L1Q9P0L9 805 aa17.81■□□□□ 0.44
MRPS28-209ENST00000522987 BDP1A6H8Y1 2624 aa17.8■□□□□ 0.44
MRPS28-209ENST00000522987 PRC1O43663 620 aa17.8■□□□□ 0.44
MRPS28-209ENST00000522987 UPP2O95045 317 aa17.8■□□□□ 0.44
MRPS28-209ENST00000522987 PARNO95453 639 aaKnown RBP17.8■□□□□ 0.44
MRPS28-209ENST00000522987 TGFB3P10600 412 aa17.8■□□□□ 0.44
MRPS28-209ENST00000522987 POU3F3P20264 500 aaPredicted RBP17.8■□□□□ 0.44
MRPS28-209ENST00000522987 TRAF1Q13077 416 aa17.8■□□□□ 0.44
MRPS28-209ENST00000522987 AAK1Q2M2I8 961 aa17.8■□□□□ 0.44
MRPS28-209ENST00000522987 GNPTABQ3T906 1256 aa17.8■□□□□ 0.44
MRPS28-209ENST00000522987 CCDC82Q8N4S0 544 aa17.8■□□□□ 0.44
MRPS28-209ENST00000522987 SAMD3Q8N6K7 520 aa17.8■□□□□ 0.44
MRPS28-209ENST00000522987 CTCFLQ8NI51 663 aaPredicted RBP17.8■□□□□ 0.44
MRPS28-209ENST00000522987 RRP36Q96EU6 259 aaKnown RBP17.8■□□□□ 0.44
MRPS28-209ENST00000522987 TGS1Q96RS0 853 aaKnown RBP17.8■□□□□ 0.44
MRPS28-209ENST00000522987 MYO7AQ13402 2215 aa17.79■□□□□ 0.44
MRPS28-209ENST00000522987 SPATA31C2B4DYI2 1134 aa17.79■□□□□ 0.44
MRPS28-209ENST00000522987 CASC1Q6TDU7 716 aa17.79■□□□□ 0.44
MRPS28-209ENST00000522987 SRBD1Q8N5C6 995 aaKnown RBP17.79■□□□□ 0.44
MRPS28-209ENST00000522987 MAP4K1Q92918 833 aa17.79■□□□□ 0.44
MRPS28-209ENST00000522987 CUL5Q93034 780 aa17.79■□□□□ 0.44
MRPS28-209ENST00000522987 HLA-CQ95604 372 aa17.79■□□□□ 0.44
MRPS28-209ENST00000522987 INPP4AQ96PE3 977 aaPredicted RBP17.79■□□□□ 0.44
MRPS28-209ENST00000522987 GPR20Q99678 358 aa17.79■□□□□ 0.44
MRPS28-209ENST00000522987 SEC63Q9UGP8 760 aaKnown RBP17.79■□□□□ 0.44
MRPS28-209ENST00000522987 FRMPD4Q14CM0 1322 aa17.78■□□□□ 0.44
MRPS28-209ENST00000522987 FIBPO43427 364 aa17.78■□□□□ 0.44
MRPS28-209ENST00000522987 AMHP03971 560 aa17.78■□□□□ 0.44
MRPS28-209ENST00000522987 ERVK-21P61565 698 aa17.78■□□□□ 0.44
MRPS28-209ENST00000522987 ARHGAP4P98171 946 aa17.78■□□□□ 0.44
MRPS28-209ENST00000522987 NEDD9Q14511 834 aa17.78■□□□□ 0.44
MRPS28-209ENST00000522987 UBE2SQ16763 222 aa17.78■□□□□ 0.44
MRPS28-209ENST00000522987 SKAP1Q86WV1 359 aa17.78■□□□□ 0.44
MRPS28-209ENST00000522987 SPZ1Q9BXG8 430 aa17.78■□□□□ 0.44
MRPS28-209ENST00000522987 MUC3AQ02505 3323 aa17.78■□□□□ 0.44
MRPS28-209ENST00000522987 RALGAPA2Q2PPJ7 1873 aa17.78■□□□□ 0.44
MRPS28-209ENST00000522987 EMSYQ7Z589 1322 aa17.77■□□□□ 0.44
MRPS28-209ENST00000522987 CCDC69A6NI79 296 aa17.77■□□□□ 0.44
MRPS28-209ENST00000522987 MEIS2O14770 477 aa17.77■□□□□ 0.44
MRPS28-209ENST00000522987 MARK3P27448 753 aa17.77■□□□□ 0.44
MRPS28-209ENST00000522987 ICAM3P32942 547 aa17.77■□□□□ 0.44
MRPS28-209ENST00000522987 PLEKHG4Q58EX7 1191 aa17.77■□□□□ 0.44
MRPS28-209ENST00000522987 METTL7BQ6UX53 244 aa17.77■□□□□ 0.44
MRPS28-209ENST00000522987 FBXO22Q8NEZ5 403 aa17.77■□□□□ 0.44
MRPS28-209ENST00000522987 COG5Q9UP83 839 aa17.77■□□□□ 0.44
MRPS28-209ENST00000522987 XIRP2A4UGR9 3374 aa17.77■□□□□ 0.43
MRPS28-209ENST00000522987 SH2B2O14492 632 aaPredicted RBP17.76■□□□□ 0.43
MRPS28-209ENST00000522987 EFCAB14O75071 495 aa17.76■□□□□ 0.43
MRPS28-209ENST00000522987 ATP9AO75110 1047 aa17.76■□□□□ 0.43
MRPS28-209ENST00000522987 DDAH1O94760 285 aa17.76■□□□□ 0.43
MRPS28-209ENST00000522987 KIF5BP33176 963 aa17.76■□□□□ 0.43
MRPS28-209ENST00000522987 PCNX4Q63HM2 1172 aa17.76■□□□□ 0.43
MRPS28-209ENST00000522987 RUFY4Q6ZNE9 571 aa17.76■□□□□ 0.43
MRPS28-209ENST00000522987 LMBR1Q8WVP7 490 aa17.76■□□□□ 0.43
MRPS28-209ENST00000522987 SEPT8Q92599 483 aa17.76■□□□□ 0.43
MRPS28-209ENST00000522987 ZBTB10Q96DT7 871 aa17.76■□□□□ 0.43
MRPS28-209ENST00000522987 USP26Q9BXU7 913 aa17.76■□□□□ 0.43
MRPS28-209ENST00000522987 LSG1Q9H089 658 aaKnown RBP17.76■□□□□ 0.43
MRPS28-209ENST00000522987 INSL6Q9Y581 213 aa17.76■□□□□ 0.43
MRPS28-209ENST00000522987 KIAA1671Q9BY89 1806 aa17.76■□□□□ 0.43
MRPS28-209ENST00000522987 SLC27A2O14975 620 aa17.75■□□□□ 0.43
MRPS28-209ENST00000522987 CSPG5O95196 566 aa17.75■□□□□ 0.43
MRPS28-209ENST00000522987 HOXC8P31273 242 aa17.75■□□□□ 0.43
MRPS28-209ENST00000522987 YME1L1Q96TA2 773 aa17.75■□□□□ 0.43
MRPS28-209ENST00000522987 EPHX3Q9H6B9 360 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms