RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 RFC2P35250 354 aa21.44■■□□□ 1.02
SPIDR-220ENST00000522900 METAP2P50579 478 aaKnown RBP eCLIP21.44■■□□□ 1.02
SPIDR-220ENST00000522900 RABGGTBP53611 331 aa21.44■■□□□ 1.02
SPIDR-220ENST00000522900 RCAN1P53805 252 aa21.44■■□□□ 1.02
SPIDR-220ENST00000522900 TRIM71Q2Q1W2 868 aaKnown RBP21.44■■□□□ 1.02
SPIDR-220ENST00000522900 CAGE1Q8TC20 777 aa21.44■■□□□ 1.02
SPIDR-220ENST00000522900 GPRASP2Q96D09 838 aa21.44■■□□□ 1.02
SPIDR-220ENST00000522900 SENP7Q9BQF6 1050 aa21.44■■□□□ 1.02
SPIDR-220ENST00000522900 FTOQ9C0B1 505 aaKnown RBP eCLIP21.44■■□□□ 1.02
SPIDR-220ENST00000522900 RIC8AQ9NPQ8 531 aa21.44■■□□□ 1.02
SPIDR-220ENST00000522900 PPP4R2Q9NY27 417 aa21.44■■□□□ 1.02
SPIDR-220ENST00000522900 BARHL2Q9NY43 387 aa21.44■■□□□ 1.02
SPIDR-220ENST00000522900 YBX2Q9Y2T7 364 aaKnown RBP21.44■■□□□ 1.02
SPIDR-220ENST00000522900 MYH7BA7E2Y1 1941 aa21.44■■□□□ 1.02
SPIDR-220ENST00000522900 SMCO2A6NFE2 343 aa21.43■■□□□ 1.02
SPIDR-220ENST00000522900 PFKMP08237 780 aa21.43■■□□□ 1.02
SPIDR-220ENST00000522900 KCNA2P16389 499 aa21.43■■□□□ 1.02
SPIDR-220ENST00000522900 PTK7Q13308 1070 aa21.43■■□□□ 1.02
SPIDR-220ENST00000522900 TRIM50Q86XT4 487 aa21.43■■□□□ 1.02
SPIDR-220ENST00000522900 CCDC155Q8N6L0 562 aa21.43■■□□□ 1.02
SPIDR-220ENST00000522900 USP26Q9BXU7 913 aa21.43■■□□□ 1.02
SPIDR-220ENST00000522900 AGXT2Q9BYV1 514 aa21.43■■□□□ 1.02
SPIDR-220ENST00000522900 TMEM260Q9NX78 707 aa21.43■■□□□ 1.02
SPIDR-220ENST00000522900 PKD2L1Q9P0L9 805 aa21.43■■□□□ 1.02
SPIDR-220ENST00000522900 ADAMTS3O15072 1205 aa21.42■■□□□ 1.02
SPIDR-220ENST00000522900 MYOGP15173 224 aa21.42■■□□□ 1.02
SPIDR-220ENST00000522900 SELPP16109 830 aa21.42■■□□□ 1.02
SPIDR-220ENST00000522900 ADCY7P51828 1080 aa21.42■■□□□ 1.02
SPIDR-220ENST00000522900 RBL2Q08999 1139 aa21.42■■□□□ 1.02
SPIDR-220ENST00000522900 UTP14CQ5TAP6 766 aaKnown RBP21.42■■□□□ 1.02
SPIDR-220ENST00000522900 TRAF7Q6Q0C0 670 aa21.42■■□□□ 1.02
SPIDR-220ENST00000522900 LRRC8DQ7L1W4 858 aa21.42■■□□□ 1.02
SPIDR-220ENST00000522900 FBXL16Q8N461 479 aa21.42■■□□□ 1.02
SPIDR-220ENST00000522900 CYP2W1Q8TAV3 490 aa21.42■■□□□ 1.02
SPIDR-220ENST00000522900 AFAP1L1Q8TED9 768 aa21.42■■□□□ 1.02
SPIDR-220ENST00000522900 NKX2-4Q9H2Z4 354 aa21.42■■□□□ 1.02
SPIDR-220ENST00000522900 JADE2Q9NQC1 790 aa21.42■■□□□ 1.02
SPIDR-220ENST00000522900 CHD9Q3L8U1 2897 aa21.41■■□□□ 1.02
SPIDR-220ENST00000522900 NBNO60934 754 aa21.41■■□□□ 1.02
SPIDR-220ENST00000522900 PPFIA3O75145 1194 aa21.41■■□□□ 1.02
SPIDR-220ENST00000522900 SMIM10L2AP0DMW4 78 aa21.41■■□□□ 1.02
SPIDR-220ENST00000522900 SMIM10L2BP0DMW5 78 aa21.41■■□□□ 1.02
SPIDR-220ENST00000522900 PSMA5P28066 241 aa21.41■■□□□ 1.02
SPIDR-220ENST00000522900 MTMR1Q13613 665 aa21.41■■□□□ 1.02
SPIDR-220ENST00000522900 PFKFB3Q16875 520 aaPredicted RBP21.41■■□□□ 1.02
SPIDR-220ENST00000522900 TCTN1Q2MV58 587 aa21.41■■□□□ 1.02
SPIDR-220ENST00000522900 PPP1R18Q6NYC8 613 aa21.41■■□□□ 1.02
SPIDR-220ENST00000522900 RNPEPQ9H4A4 650 aa21.41■■□□□ 1.02
SPIDR-220ENST00000522900 MSRAQ9UJ68 235 aa21.41■■□□□ 1.02
SPIDR-220ENST00000522900 SCN5AQ14524 2016 aa21.41■■□□□ 1.02
SPIDR-220ENST00000522900 CCDC196A0A1B0GTZ2 297 aa21.4■■□□□ 1.02
SPIDR-220ENST00000522900 GSTTP1A0A1W2PQM5 241 aa21.4■■□□□ 1.02
SPIDR-220ENST00000522900 C17orf102A2RUQ5 167 aa21.4■■□□□ 1.02
SPIDR-220ENST00000522900 ACTN1P12814 892 aa21.4■■□□□ 1.02
SPIDR-220ENST00000522900 ATP2A2P16615 1042 aaKnown RBP21.4■■□□□ 1.02
SPIDR-220ENST00000522900 HOXC8P31273 242 aa21.4■■□□□ 1.02
SPIDR-220ENST00000522900 PKN1Q16512 942 aa21.4■■□□□ 1.02
SPIDR-220ENST00000522900 ZNF618Q5T7W0 954 aa21.4■■□□□ 1.02
SPIDR-220ENST00000522900 SERINC5Q86VE9 423 aa21.4■■□□□ 1.02
SPIDR-220ENST00000522900 ATP6V0A1Q93050 837 aa21.4■■□□□ 1.02
SPIDR-220ENST00000522900 PHKBQ93100 1093 aa21.4■■□□□ 1.02
SPIDR-220ENST00000522900 ANO3Q9BYT9 981 aa21.4■■□□□ 1.02
SPIDR-220ENST00000522900 ZSWIM6Q9HCJ5 1215 aa21.4■■□□□ 1.02
SPIDR-220ENST00000522900 SETD4Q9NVD3 440 aa21.4■■□□□ 1.02
SPIDR-220ENST00000522900 hCG_1984214I3L0E3 225 aa21.39■■□□□ 1.01
SPIDR-220ENST00000522900 TREHO43280 583 aa21.39■■□□□ 1.01
SPIDR-220ENST00000522900 SCG2P13521 617 aa21.39■■□□□ 1.01
SPIDR-220ENST00000522900 PDIA3P30101 505 aaKnown RBP21.39■■□□□ 1.01
SPIDR-220ENST00000522900 CLK2P49760 499 aaKnown RBP21.39■■□□□ 1.01
SPIDR-220ENST00000522900 TOB2Q14106 344 aaPredicted RBP21.39■■□□□ 1.01
SPIDR-220ENST00000522900 MBTPS1Q14703 1052 aa21.39■■□□□ 1.01
SPIDR-220ENST00000522900 RAB30Q15771 203 aa21.39■■□□□ 1.01
SPIDR-220ENST00000522900 NTRK3Q16288 839 aa21.39■■□□□ 1.01
SPIDR-220ENST00000522900 RUFY3Q7L099 469 aa21.39■■□□□ 1.01
SPIDR-220ENST00000522900 ZNF713Q8N859 430 aaPredicted RBP21.39■■□□□ 1.01
SPIDR-220ENST00000522900 GIMAP8Q8ND71 665 aaPredicted RBP21.39■■□□□ 1.01
SPIDR-220ENST00000522900 CDHR1Q96JP9 859 aa21.39■■□□□ 1.01
SPIDR-220ENST00000522900 MXRA8Q9BRK3 442 aa21.39■■□□□ 1.01
SPIDR-220ENST00000522900 LARP6Q9BRS8 491 aaKnown RBP21.39■■□□□ 1.01
SPIDR-220ENST00000522900 NCOA5Q9HCD5 579 aaKnown RBP21.39■■□□□ 1.01
SPIDR-220ENST00000522900 PRPF3O43395 683 aaKnown RBP21.38■■□□□ 1.01
SPIDR-220ENST00000522900 EPB41L2O43491 1005 aaKnown RBP21.38■■□□□ 1.01
SPIDR-220ENST00000522900 FOSP01100 380 aaPredicted RBP21.38■■□□□ 1.01
SPIDR-220ENST00000522900 ARP10275 920 aa21.38■■□□□ 1.01
SPIDR-220ENST00000522900 FOSL2P15408 326 aa21.38■■□□□ 1.01
SPIDR-220ENST00000522900 TCF7P36402 384 aaPredicted RBP21.38■■□□□ 1.01
SPIDR-220ENST00000522900 EVCP57679 992 aa21.38■■□□□ 1.01
SPIDR-220ENST00000522900 CCT2P78371 535 aaKnown RBP21.38■■□□□ 1.01
SPIDR-220ENST00000522900 JAKMIP3Q5VZ66 844 aa21.38■■□□□ 1.01
SPIDR-220ENST00000522900 SEPT1Q8WYJ6 367 aa21.38■■□□□ 1.01
SPIDR-220ENST00000522900 EHMT1Q9H9B1 1298 aa21.38■■□□□ 1.01
SPIDR-220ENST00000522900 NID2Q14112 1375 aa21.37■■□□□ 1.01
SPIDR-220ENST00000522900 MAFGO15525 162 aa21.37■■□□□ 1.01
SPIDR-220ENST00000522900 CXCL10P02778 98 aa21.37■■□□□ 1.01
SPIDR-220ENST00000522900 THPOP40225 353 aa21.37■■□□□ 1.01
SPIDR-220ENST00000522900 MAFAQ8NHW3 353 aaPredicted RBP21.37■■□□□ 1.01
SPIDR-220ENST00000522900 PRDM12Q9H4Q4 367 aa21.37■■□□□ 1.01
SPIDR-220ENST00000522900 SLC28A3Q9HAS3 691 aa21.37■■□□□ 1.01
SPIDR-220ENST00000522900 KCNH7Q9NS40 1196 aa21.37■■□□□ 1.01
SPIDR-220ENST00000522900 PCDHA11Q9Y5I1 949 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms