RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 CA3P07451 260 aa11.78□□□□□ -0.52
CTNNA1-235ENST00000522730 SMARCA1P28370 1054 aa11.78□□□□□ -0.52
CTNNA1-235ENST00000522730 LIFRP42702 1097 aa11.78□□□□□ -0.52
CTNNA1-235ENST00000522730 FGD1P98174 961 aa11.78□□□□□ -0.52
CTNNA1-235ENST00000522730 PTK7Q13308 1070 aa11.78□□□□□ -0.52
CTNNA1-235ENST00000522730 NEDD9Q14511 834 aa11.78□□□□□ -0.52
CTNNA1-235ENST00000522730 HIC1Q14526 733 aa11.78□□□□□ -0.52
CTNNA1-235ENST00000522730 UBE2SQ16763 222 aa11.78□□□□□ -0.52
CTNNA1-235ENST00000522730 BMP2KLQ5H9B9 411 aa11.78□□□□□ -0.52
CTNNA1-235ENST00000522730 ZNF618Q5T7W0 954 aa11.78□□□□□ -0.52
CTNNA1-235ENST00000522730 FAM117BQ6P1L5 589 aa11.78□□□□□ -0.52
CTNNA1-235ENST00000522730 NLRX1Q86UT6 975 aa11.78□□□□□ -0.52
CTNNA1-235ENST00000522730 HERC6Q8IVU3 1022 aa11.78□□□□□ -0.52
CTNNA1-235ENST00000522730 ARNTL2Q8WYA1 636 aa11.78□□□□□ -0.52
CTNNA1-235ENST00000522730 ATP6V0A1Q93050 837 aa11.78□□□□□ -0.52
CTNNA1-235ENST00000522730 WNT8BQ93098 351 aa11.78□□□□□ -0.52
CTNNA1-235ENST00000522730 NEK1Q96PY6 1258 aa11.78□□□□□ -0.52
CTNNA1-235ENST00000522730 TUT1Q9H6E5 874 aaKnown RBP11.78□□□□□ -0.52
CTNNA1-235ENST00000522730 TELO2Q9Y4R8 837 aa11.78□□□□□ -0.52
CTNNA1-235ENST00000522730 MYH7BA7E2Y1 1941 aa11.78□□□□□ -0.52
CTNNA1-235ENST00000522730 SCN5AQ14524 2016 aa11.77□□□□□ -0.52
CTNNA1-235ENST00000522730 VCANP13611 3396 aa11.77□□□□□ -0.53
CTNNA1-235ENST00000522730 C17orf102A2RUQ5 167 aa11.77□□□□□ -0.53
CTNNA1-235ENST00000522730 FIBPO43427 364 aa11.77□□□□□ -0.53
CTNNA1-235ENST00000522730 TLL1O43897 1013 aa11.77□□□□□ -0.53
CTNNA1-235ENST00000522730 NBNO60934 754 aa11.77□□□□□ -0.53
CTNNA1-235ENST00000522730 STAM2O75886 525 aa11.77□□□□□ -0.53
CTNNA1-235ENST00000522730 LGALS2P05162 132 aa11.77□□□□□ -0.53
CTNNA1-235ENST00000522730 SMIM10L2AP0DMW4 78 aa11.77□□□□□ -0.53
CTNNA1-235ENST00000522730 SMIM10L2BP0DMW5 78 aa11.77□□□□□ -0.53
CTNNA1-235ENST00000522730 SEMA3FQ13275 785 aa11.77□□□□□ -0.53
CTNNA1-235ENST00000522730 SKIV2LQ15477 1246 aaKnown RBP11.77□□□□□ -0.53
CTNNA1-235ENST00000522730 RASEFQ8IZ41 740 aa11.77□□□□□ -0.53
CTNNA1-235ENST00000522730 SLC9A7Q96T83 725 aa11.77□□□□□ -0.53
CTNNA1-235ENST00000522730 C16orf70Q9BSU1 422 aa11.77□□□□□ -0.53
CTNNA1-235ENST00000522730 MTA3Q9BTC8 594 aa11.77□□□□□ -0.53
CTNNA1-235ENST00000522730 KIAA1217Q5T5P2 1943 aa11.77□□□□□ -0.53
CTNNA1-235ENST00000522730 TRIP12Q14669 1992 aaPredicted RBP11.76□□□□□ -0.53
CTNNA1-235ENST00000522730 SPDYE3A6NKU9 549 aa11.76□□□□□ -0.53
CTNNA1-235ENST00000522730 RSPH10B2B2RC85 870 aa11.76□□□□□ -0.53
CTNNA1-235ENST00000522730 TREHO43280 583 aa11.76□□□□□ -0.53
CTNNA1-235ENST00000522730 CDC45O75419 566 aa11.76□□□□□ -0.53
CTNNA1-235ENST00000522730 RSPH10BP0C881 870 aa11.76□□□□□ -0.53
CTNNA1-235ENST00000522730 ICAM3P32942 547 aa11.76□□□□□ -0.53
CTNNA1-235ENST00000522730 IKBKEQ14164 716 aa11.76□□□□□ -0.53
CTNNA1-235ENST00000522730 GPNMBQ14956 572 aa11.76□□□□□ -0.53
CTNNA1-235ENST00000522730 TCTN1Q2MV58 587 aa11.76□□□□□ -0.53
CTNNA1-235ENST00000522730 PCNX4Q63HM2 1172 aa11.76□□□□□ -0.53
CTNNA1-235ENST00000522730 METTL7BQ6UX53 244 aa11.76□□□□□ -0.53
CTNNA1-235ENST00000522730 TMTC3Q6ZXV5 915 aa11.76□□□□□ -0.53
CTNNA1-235ENST00000522730 DHX32Q7L7V1 743 aaKnown RBP11.76□□□□□ -0.53
CTNNA1-235ENST00000522730 TRIM50Q86XT4 487 aa11.76□□□□□ -0.53
CTNNA1-235ENST00000522730 PHOSPHO2Q8TCD6 241 aa11.76□□□□□ -0.53
CTNNA1-235ENST00000522730 INPP4AQ96PE3 977 aaPredicted RBP11.76□□□□□ -0.53
CTNNA1-235ENST00000522730 GPR20Q99678 358 aa11.76□□□□□ -0.53
CTNNA1-235ENST00000522730 USP26Q9BXU7 913 aa11.76□□□□□ -0.53
CTNNA1-235ENST00000522730 RNPEPQ9H4A4 650 aa11.76□□□□□ -0.53
CTNNA1-235ENST00000522730 SETD4Q9NVD3 440 aa11.76□□□□□ -0.53
CTNNA1-235ENST00000522730 PCDHA6Q9UN73 950 aa11.76□□□□□ -0.53
CTNNA1-235ENST00000522730 PCDHA8Q9Y5H6 950 aa11.76□□□□□ -0.53
CTNNA1-235ENST00000522730 V9GY48 417 aaPredicted RBP11.76□□□□□ -0.53
CTNNA1-235ENST00000522730 TRANK1O15050 2925 aa11.75□□□□□ -0.53
CTNNA1-235ENST00000522730 PIK3CDO00329 1044 aa11.75□□□□□ -0.53
CTNNA1-235ENST00000522730 ZBTB43O43298 467 aa11.75□□□□□ -0.53
CTNNA1-235ENST00000522730 ATP9AO75110 1047 aa11.75□□□□□ -0.53
CTNNA1-235ENST00000522730 BAIAP3O94812 1187 aa11.75□□□□□ -0.53
CTNNA1-235ENST00000522730 CTSHP09668 335 aa11.75□□□□□ -0.53
CTNNA1-235ENST00000522730 HOXD8P13378 290 aaPredicted RBP11.75□□□□□ -0.53
CTNNA1-235ENST00000522730 CPA1P15085 419 aa11.75□□□□□ -0.53
CTNNA1-235ENST00000522730 NAPAP54920 295 aa11.75□□□□□ -0.53
CTNNA1-235ENST00000522730 WDR5P61964 334 aaKnown RBP11.75□□□□□ -0.53
CTNNA1-235ENST00000522730 DEFB103AP81534 67 aa11.75□□□□□ -0.53
CTNNA1-235ENST00000522730 ARHGAP4P98171 946 aa11.75□□□□□ -0.53
CTNNA1-235ENST00000522730 TAP1Q03518 808 aa11.75□□□□□ -0.53
CTNNA1-235ENST00000522730 RTN1Q16799 776 aa11.75□□□□□ -0.53
CTNNA1-235ENST00000522730 TRIM71Q2Q1W2 868 aaKnown RBP11.75□□□□□ -0.53
CTNNA1-235ENST00000522730 ADCK5Q3MIX3 580 aa11.75□□□□□ -0.53
CTNNA1-235ENST00000522730 XRRA1Q6P2D8 792 aa11.75□□□□□ -0.53
CTNNA1-235ENST00000522730 CNKSR3Q6P9H4 555 aa11.75□□□□□ -0.53
CTNNA1-235ENST00000522730 PLCD3Q8N3E9 789 aa11.75□□□□□ -0.53
CTNNA1-235ENST00000522730 PGBD1Q96JS3 809 aa11.75□□□□□ -0.53
CTNNA1-235ENST00000522730 MTUS1Q9ULD2 1270 aa11.75□□□□□ -0.53
CTNNA1-235ENST00000522730 BRPF3Q9ULD4 1205 aa11.75□□□□□ -0.53
CTNNA1-235ENST00000522730 TTC28Q96AY4 2481 aa11.75□□□□□ -0.53
CTNNA1-235ENST00000522730 TET1Q8NFU7 2136 aa11.74□□□□□ -0.53
CTNNA1-235ENST00000522730 KLF18A0A0U1RQI7 1052 aa11.74□□□□□ -0.53
CTNNA1-235ENST00000522730 LCHNA4D1U4 455 aa11.74□□□□□ -0.53
CTNNA1-235ENST00000522730 GOLGA8AA7E2F4 631 aa11.74□□□□□ -0.53
CTNNA1-235ENST00000522730 GOLGA8BA8MQT2 603 aa11.74□□□□□ -0.53
CTNNA1-235ENST00000522730 GTPBP6O43824 516 aaPredicted RBP11.74□□□□□ -0.53
CTNNA1-235ENST00000522730 ARHGEF15O94989 841 aa11.74□□□□□ -0.53
CTNNA1-235ENST00000522730 PARNO95453 639 aaKnown RBP11.74□□□□□ -0.53
CTNNA1-235ENST00000522730 GNAT1P11488 350 aa11.74□□□□□ -0.53
CTNNA1-235ENST00000522730 MARK3P27448 753 aa11.74□□□□□ -0.53
CTNNA1-235ENST00000522730 TCF7P36402 384 aaPredicted RBP11.74□□□□□ -0.53
CTNNA1-235ENST00000522730 EXOSC10Q01780 885 aaKnown RBP11.74□□□□□ -0.53
CTNNA1-235ENST00000522730 MBTPS1Q14703 1052 aa11.74□□□□□ -0.53
CTNNA1-235ENST00000522730 KRT40Q6A162 431 aa11.74□□□□□ -0.53
CTNNA1-235ENST00000522730 APOA5Q6Q788 366 aa11.74□□□□□ -0.53
CTNNA1-235ENST00000522730 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms