RNA–Protein interactions for RNA: ENST00000522321.5

SPIDR-219, Transcript of scaffold protein involved in DNA repair, human

TSL 4

Gene SPIDR, Length 760 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-219	ENST00000522321	NFKBIB	Q15653	356 aa		13.86	□□□□□ -0.19
SPIDR-219	ENST00000522321	ZRSR1	Q15695	479 aa	Known RBP	13.86	□□□□□ -0.19
SPIDR-219	ENST00000522321	CCL14	Q16627	93 aa		13.86	□□□□□ -0.19
SPIDR-219	ENST00000522321	KRT79	Q5XKE5	535 aa		13.86	□□□□□ -0.19
SPIDR-219	ENST00000522321	ADAL	Q6DHV7	355 aa		13.86	□□□□□ -0.19
SPIDR-219	ENST00000522321	C4orf32	Q8N8J7	132 aa		13.86	□□□□□ -0.19
SPIDR-219	ENST00000522321	HAS1	Q92839	578 aa		13.86	□□□□□ -0.19
SPIDR-219	ENST00000522321	GJA10	Q969M2	543 aa		13.86	□□□□□ -0.19
SPIDR-219	ENST00000522321	JPH1	Q9HDC5	661 aa	Predicted RBP	13.86	□□□□□ -0.19
SPIDR-219	ENST00000522321	SAMM50	Q9Y512	469 aa		13.86	□□□□□ -0.19
SPIDR-219	ENST00000522321	MYH15	Q9Y2K3	1946 aa		13.86	□□□□□ -0.19
SPIDR-219	ENST00000522321	POTEM	A6NI47	508 aa		13.85	□□□□□ -0.19
SPIDR-219	ENST00000522321	SPATA31C2	B4DYI2	1134 aa		13.85	□□□□□ -0.19
SPIDR-219	ENST00000522321	TXN	P10599	105 aa	Known RBP	13.85	□□□□□ -0.19
SPIDR-219	ENST00000522321	TGFB3	P10600	412 aa		13.85	□□□□□ -0.19
SPIDR-219	ENST00000522321	UBA1	P22314	1058 aa	Known RBP	13.85	□□□□□ -0.19
SPIDR-219	ENST00000522321	CYP2C19	P33261	490 aa		13.85	□□□□□ -0.19
SPIDR-219	ENST00000522321	KRT76	Q01546	638 aa		13.85	□□□□□ -0.19
SPIDR-219	ENST00000522321	SP4	Q02446	784 aa		13.85	□□□□□ -0.19
SPIDR-219	ENST00000522321	ACVR2B	Q13705	512 aa		13.85	□□□□□ -0.19
SPIDR-219	ENST00000522321	ZNF579	Q8NAF0	562 aa	Known RBP	13.85	□□□□□ -0.19
SPIDR-219	ENST00000522321	SNX29	Q8TEQ0	813 aa		13.85	□□□□□ -0.19
SPIDR-219	ENST00000522321	SYMPK	Q92797	1274 aa	Known RBP	13.85	□□□□□ -0.19
SPIDR-219	ENST00000522321	CALML4	Q96GE6	196 aa		13.85	□□□□□ -0.19
SPIDR-219	ENST00000522321	MLXIP	Q9HAP2	919 aa		13.85	□□□□□ -0.19
SPIDR-219	ENST00000522321	CCDC39	Q9UFE4	941 aa		13.85	□□□□□ -0.19
SPIDR-219	ENST00000522321	WDR64	B1ANS9	1081 aa		13.84	□□□□□ -0.19
SPIDR-219	ENST00000522321	NOP56	O00567	594 aa	Known RBP	13.84	□□□□□ -0.19
SPIDR-219	ENST00000522321	ADCY3	O60266	1144 aa		13.84	□□□□□ -0.19
SPIDR-219	ENST00000522321	SORBS3	O60504	671 aa		13.84	□□□□□ -0.19
SPIDR-219	ENST00000522321	GADD45B	O75293	160 aa	Predicted RBP	13.84	□□□□□ -0.19
SPIDR-219	ENST00000522321	KCNA2	P16389	499 aa		13.84	□□□□□ -0.19
SPIDR-219	ENST00000522321	JAK3	P52333	1124 aa		13.84	□□□□□ -0.19
SPIDR-219	ENST00000522321	GRIN1	Q05586	938 aa		13.84	□□□□□ -0.19
SPIDR-219	ENST00000522321	ITGB3BP	Q13352	177 aa	Predicted RBP	13.84	□□□□□ -0.19
SPIDR-219	ENST00000522321	IRF5	Q13568	498 aa		13.84	□□□□□ -0.19
SPIDR-219	ENST00000522321	SPECC1	Q5M775	1068 aa		13.84	□□□□□ -0.19
SPIDR-219	ENST00000522321	FBXO46	Q6PJ61	603 aa	Predicted RBP	13.84	□□□□□ -0.19
SPIDR-219	ENST00000522321	MIER3	Q7Z3K6	550 aa		13.84	□□□□□ -0.19
SPIDR-219	ENST00000522321	CABP7	Q86V35	215 aa		13.84	□□□□□ -0.19
SPIDR-219	ENST00000522321	SLAIN1	Q8ND83	568 aa		13.84	□□□□□ -0.19
SPIDR-219	ENST00000522321	CCDC34	Q96HJ3	373 aa		13.84	□□□□□ -0.19
SPIDR-219	ENST00000522321	PYM1	Q9BRP8	204 aa	Known RBP	13.84	□□□□□ -0.19
SPIDR-219	ENST00000522321	LMBRD1	Q9NUN5	540 aa		13.84	□□□□□ -0.19
SPIDR-219	ENST00000522321	FLRT1	Q9NZU1	646 aa		13.84	□□□□□ -0.19
SPIDR-219	ENST00000522321	SLC9A2	Q9UBY0	812 aa		13.84	□□□□□ -0.19
SPIDR-219	ENST00000522321	NFASC	O94856	1347 aa		13.84	□□□□□ -0.19
SPIDR-219	ENST00000522321	KDM3A	Q9Y4C1	1321 aa		13.84	□□□□□ -0.19
SPIDR-219	ENST00000522321	KIN	O60870	393 aa	Known RBP	13.83	□□□□□ -0.2
SPIDR-219	ENST00000522321	PSMD10	O75832	226 aa		13.83	□□□□□ -0.2
SPIDR-219	ENST00000522321	RGS20	O76081	388 aa		13.83	□□□□□ -0.2
SPIDR-219	ENST00000522321	GGPS1	O95749	300 aa		13.83	□□□□□ -0.2
SPIDR-219	ENST00000522321	SNAI1	O95863	264 aa	Predicted RBP	13.83	□□□□□ -0.2
SPIDR-219	ENST00000522321	HMGCR	P04035	888 aa		13.83	□□□□□ -0.2
SPIDR-219	ENST00000522321	PFKFB1	P16118	471 aa		13.83	□□□□□ -0.2
SPIDR-219	ENST00000522321	CMA1	P23946	247 aa		13.83	□□□□□ -0.2
SPIDR-219	ENST00000522321	SFN	P31947	248 aa		13.83	□□□□□ -0.2
SPIDR-219	ENST00000522321	CCT6A	P40227	531 aa	Known RBP	13.83	□□□□□ -0.2
SPIDR-219	ENST00000522321	SEMA3F	Q13275	785 aa		13.83	□□□□□ -0.2
SPIDR-219	ENST00000522321	PPP2R5C	Q13362	524 aa		13.83	□□□□□ -0.2
SPIDR-219	ENST00000522321	PDIA5	Q14554	519 aa		13.83	□□□□□ -0.2
SPIDR-219	ENST00000522321	IL17A	Q16552	155 aa		13.83	□□□□□ -0.2
SPIDR-219	ENST00000522321	AXDND1	Q5T1B0	1012 aa	Predicted RBP	13.83	□□□□□ -0.2
SPIDR-219	ENST00000522321	RESP18	Q5W5W9	173 aa		13.83	□□□□□ -0.2
SPIDR-219	ENST00000522321	SHC4	Q6S5L8	630 aa		13.83	□□□□□ -0.2
SPIDR-219	ENST00000522321	CYFIP1	Q7L576	1253 aa		13.83	□□□□□ -0.2
SPIDR-219	ENST00000522321	DHX37	Q8IY37	1157 aa	Known RBP	13.83	□□□□□ -0.2
SPIDR-219	ENST00000522321	SMAP1	Q8IYB5	467 aa	Predicted RBP	13.83	□□□□□ -0.2
SPIDR-219	ENST00000522321	IGSF22	Q8N9C0	903 aa		13.83	□□□□□ -0.2
SPIDR-219	ENST00000522321	TRIB2	Q92519	343 aa		13.83	□□□□□ -0.2
SPIDR-219	ENST00000522321	SENP7	Q9BQF6	1050 aa		13.83	□□□□□ -0.2
SPIDR-219	ENST00000522321	UNC45A	Q9H3U1	944 aa		13.83	□□□□□ -0.2
SPIDR-219	ENST00000522321	NRBP1	Q9UHY1	535 aa		13.83	□□□□□ -0.2
SPIDR-219	ENST00000522321	VAV3	Q9UKW4	847 aa		13.83	□□□□□ -0.2
SPIDR-219	ENST00000522321		A0A1B0GVL5	298 aa		13.82	□□□□□ -0.2
SPIDR-219	ENST00000522321	PP2D1	A8MPX8	630 aa		13.82	□□□□□ -0.2
SPIDR-219	ENST00000522321	NKRF	O15226	690 aa	Known RBP eCLIP	13.82	□□□□□ -0.2
SPIDR-219	ENST00000522321	ATP9A	O75110	1047 aa		13.82	□□□□□ -0.2
SPIDR-219	ENST00000522321	GH1	P01241	217 aa		13.82	□□□□□ -0.2
SPIDR-219	ENST00000522321	AKR1A1	P14550	325 aa		13.82	□□□□□ -0.2
SPIDR-219	ENST00000522321	ELN	P15502	786 aa		13.82	□□□□□ -0.2
SPIDR-219	ENST00000522321	CNGA1	P29973	690 aa		13.82	□□□□□ -0.2
SPIDR-219	ENST00000522321	ADCYAP1R1	P41586	468 aa		13.82	□□□□□ -0.2
SPIDR-219	ENST00000522321	SYK	P43405	635 aa		13.82	□□□□□ -0.2
SPIDR-219	ENST00000522321	LY6K	Q17RY6	165 aa		13.82	□□□□□ -0.2
SPIDR-219	ENST00000522321	ZNF746	Q6NUN9	644 aa	Predicted RBP	13.82	□□□□□ -0.2
SPIDR-219	ENST00000522321	MIS18BP1	Q6P0N0	1132 aa		13.82	□□□□□ -0.2
SPIDR-219	ENST00000522321	METTL7B	Q6UX53	244 aa		13.82	□□□□□ -0.2
SPIDR-219	ENST00000522321	OTOP1	Q7RTM1	612 aa		13.82	□□□□□ -0.2
SPIDR-219	ENST00000522321	OR6J1	Q8NGC5	347 aa		13.82	□□□□□ -0.2
SPIDR-219	ENST00000522321	NEK9	Q8TD19	979 aa		13.82	□□□□□ -0.2
SPIDR-219	ENST00000522321	CCDC43	Q96MW1	224 aa	Known RBP	13.82	□□□□□ -0.2
SPIDR-219	ENST00000522321	PDGFC	Q9NRA1	345 aa		13.82	□□□□□ -0.2
SPIDR-219	ENST00000522321	DDX41	Q9UJV9	622 aa	Known RBP	13.82	□□□□□ -0.2
SPIDR-219	ENST00000522321	FAM184B	Q9ULE4	1060 aa		13.82	□□□□□ -0.2
SPIDR-219	ENST00000522321	LRRC37A2	A6NM11	1700 aa		13.81	□□□□□ -0.2
SPIDR-219	ENST00000522321	SMCHD1	A6NHR9	2005 aa		13.81	□□□□□ -0.2
SPIDR-219	ENST00000522321	BACH1	O14867	736 aa		13.81	□□□□□ -0.2
SPIDR-219	ENST00000522321	ARIH2	O95376	493 aa		13.81	□□□□□ -0.2
SPIDR-219	ENST00000522321	PSAP	P07602	524 aa		13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms