RNA–Protein interactions for RNA: ENST00000521332.5

PTK2-231, Transcript of protein tyrosine kinase 2, human

TSL 4

Gene PTK2, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTK2-231	ENST00000521332	TREH	O43280	583 aa		21.29	■■□□□ 1
PTK2-231	ENST00000521332	PPP1R11	O60927	126 aa	Predicted RBP	21.29	■■□□□ 1
PTK2-231	ENST00000521332	SMIM10L2A	P0DMW4	78 aa		21.29	■■□□□ 1
PTK2-231	ENST00000521332	SMIM10L2B	P0DMW5	78 aa		21.29	■■□□□ 1
PTK2-231	ENST00000521332	BANK1	Q8NDB2	785 aa		21.29	■■□□□ 1
PTK2-231	ENST00000521332	SP7	Q8TDD2	431 aa	Predicted RBP	21.29	■■□□□ 1
PTK2-231	ENST00000521332	CNNM2	Q9H8M5	875 aa		21.29	■■□□□ 1
PTK2-231	ENST00000521332	MAP3K20	Q9NYL2	800 aa	Known RBP	21.29	■■□□□ 1
PTK2-231	ENST00000521332	NLRC5	Q86WI3	1866 aa		21.28	■■□□□ 1
PTK2-231	ENST00000521332	GCOM1	H8Y6P7	765 aa	Predicted RBP	21.28	■■□□□ 1
PTK2-231	ENST00000521332	LGALS2	P05162	132 aa		21.28	■■□□□ 1
PTK2-231	ENST00000521332	POLR2M	P0CAP2	368 aa		21.28	■■□□□ 1
PTK2-231	ENST00000521332	TGFB3	P10600	412 aa		21.28	■■□□□ 1
PTK2-231	ENST00000521332	ALAD	P13716	330 aa		21.28	■■□□□ 1
PTK2-231	ENST00000521332	PUS10	Q3MIT2	529 aa	Known RBP	21.28	■■□□□ 1
PTK2-231	ENST00000521332	IFIH1	Q9BYX4	1025 aa	Known RBP	21.28	■■□□□ 1
PTK2-231	ENST00000521332	RNPEP	Q9H4A4	650 aa		21.28	■■□□□ 1
PTK2-231	ENST00000521332		H3BNC9	293 aa		21.27	■■□□□ 1
PTK2-231	ENST00000521332	TCEAL5	Q5H9L2	206 aa		21.27	■■□□□ 1
PTK2-231	ENST00000521332	TMEM192	Q8IY95	271 aa		21.27	■■□□□ 1
PTK2-231	ENST00000521332	TOP1MT	Q969P6	601 aa		21.27	■■□□□ 1
PTK2-231	ENST00000521332	DSCC1	Q9BVC3	393 aa		21.27	■■□□□ 1
PTK2-231	ENST00000521332	MAD2L2	Q9UI95	211 aa		21.27	■■□□□ 1
PTK2-231	ENST00000521332	GHRHR	Q02643	423 aa		21.26	■□□□□ 0.99
PTK2-231	ENST00000521332	MKRN4P	Q13434	485 aa	Predicted RBP	21.26	■□□□□ 0.99
PTK2-231	ENST00000521332	GNPTAB	Q3T906	1256 aa		21.26	■□□□□ 0.99
PTK2-231	ENST00000521332	ALYREF	Q86V81	257 aa	Known RBP	21.26	■□□□□ 0.99
PTK2-231	ENST00000521332	NEK9	Q8TD19	979 aa		21.26	■□□□□ 0.99
PTK2-231	ENST00000521332	PIGS	Q96S52	555 aa		21.26	■□□□□ 0.99
PTK2-231	ENST00000521332	OSBPL7	Q9BZF2	842 aa		21.26	■□□□□ 0.99
PTK2-231	ENST00000521332	BCAS3	Q9H6U6	928 aa		21.26	■□□□□ 0.99
PTK2-231	ENST00000521332	SETD4	Q9NVD3	440 aa		21.26	■□□□□ 0.99
PTK2-231	ENST00000521332	CLDND1	Q9NY35	253 aa		21.26	■□□□□ 0.99
PTK2-231	ENST00000521332	FAM50B	Q9Y247	325 aa		21.26	■□□□□ 0.99
PTK2-231	ENST00000521332	DOCK5	Q9H7D0	1870 aa		21.26	■□□□□ 0.99
PTK2-231	ENST00000521332	HIP1	O00291	1037 aa		21.25	■□□□□ 0.99
PTK2-231	ENST00000521332	GNAT1	P11488	350 aa		21.25	■□□□□ 0.99
PTK2-231	ENST00000521332	UTP14C	Q5TAP6	766 aa	Known RBP	21.25	■□□□□ 0.99
PTK2-231	ENST00000521332	CYFIP1	Q7L576	1253 aa		21.25	■□□□□ 0.99
PTK2-231	ENST00000521332	SAMD3	Q8N6K7	520 aa		21.25	■□□□□ 0.99
PTK2-231	ENST00000521332	PABPC5	Q96DU9	382 aa	Known RBP	21.25	■□□□□ 0.99
PTK2-231	ENST00000521332	MTMR8	Q96EF0	704 aa		21.25	■□□□□ 0.99
PTK2-231	ENST00000521332	USP26	Q9BXU7	913 aa		21.25	■□□□□ 0.99
PTK2-231	ENST00000521332	NSUN3	Q9H649	340 aa	Known RBP	21.25	■□□□□ 0.99
PTK2-231	ENST00000521332	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	21.24	■□□□□ 0.99
PTK2-231	ENST00000521332	CSPG5	O95196	566 aa		21.24	■□□□□ 0.99
PTK2-231	ENST00000521332	CTNNB1	P35222	781 aa		21.24	■□□□□ 0.99
PTK2-231	ENST00000521332	SP4	Q02446	784 aa		21.24	■□□□□ 0.99
PTK2-231	ENST00000521332	TRAF1	Q13077	416 aa		21.24	■□□□□ 0.99
PTK2-231	ENST00000521332	CYB5R4	Q7L1T6	521 aa		21.24	■□□□□ 0.99
PTK2-231	ENST00000521332	PLEKHM2	Q8IWE5	1019 aa		21.24	■□□□□ 0.99
PTK2-231	ENST00000521332	PIBF1	Q8WXW3	757 aa		21.24	■□□□□ 0.99
PTK2-231	ENST00000521332	RTEL1	Q9NZ71	1219 aa		21.24	■□□□□ 0.99
PTK2-231	ENST00000521332	PALM3	A6NDB9	673 aa	Predicted RBP	21.23	■□□□□ 0.99
PTK2-231	ENST00000521332	DCX	O43602	365 aa		21.23	■□□□□ 0.99
PTK2-231	ENST00000521332	CAND2	O75155	1236 aa		21.23	■□□□□ 0.99
PTK2-231	ENST00000521332	ARHGAP4	P98171	946 aa		21.23	■□□□□ 0.99
PTK2-231	ENST00000521332	NEDD9	Q14511	834 aa		21.23	■□□□□ 0.99
PTK2-231	ENST00000521332	CHD1L	Q86WJ1	897 aa		21.23	■□□□□ 0.99
PTK2-231	ENST00000521332	TRIM50	Q86XT4	487 aa		21.23	■□□□□ 0.99
PTK2-231	ENST00000521332	FIBCD1	Q8N539	461 aa		21.23	■□□□□ 0.99
PTK2-231	ENST00000521332	APBB2	Q92870	758 aa		21.23	■□□□□ 0.99
PTK2-231	ENST00000521332	ZNF215	Q9UL58	517 aa	Predicted RBP	21.23	■□□□□ 0.99
PTK2-231	ENST00000521332	RALGAPA2	Q2PPJ7	1873 aa		21.23	■□□□□ 0.99
PTK2-231	ENST00000521332	MUC6	Q6W4X9	2439 aa		21.22	■□□□□ 0.99
PTK2-231	ENST00000521332	HOXC8	P31273	242 aa		21.22	■□□□□ 0.99
PTK2-231	ENST00000521332	TRDN	Q13061	729 aa		21.22	■□□□□ 0.99
PTK2-231	ENST00000521332	SEC23A	Q15436	765 aa		21.22	■□□□□ 0.99
PTK2-231	ENST00000521332	IL17RA	Q96F46	866 aa		21.22	■□□□□ 0.99
PTK2-231	ENST00000521332	RWDD1	Q9H446	243 aa	Predicted RBP	21.22	■□□□□ 0.99
PTK2-231	ENST00000521332	CLUL1	Q15846	466 aa		21.21	■□□□□ 0.99
PTK2-231	ENST00000521332	METTL7B	Q6UX53	244 aa		21.21	■□□□□ 0.99
PTK2-231	ENST00000521332	RPAIN	Q86UA6	219 aa		21.21	■□□□□ 0.99
PTK2-231	ENST00000521332	GPR20	Q99678	358 aa		21.21	■□□□□ 0.99
PTK2-231	ENST00000521332	OSBPL3	Q9H4L5	887 aa		21.21	■□□□□ 0.99
PTK2-231	ENST00000521332	BAZ2B	Q9UIF8	2168 aa	Known RBP	21.2	■□□□□ 0.98
PTK2-231	ENST00000521332	ERICH2	A1L162	156 aa		21.2	■□□□□ 0.98
PTK2-231	ENST00000521332	IFIT3	O14879	490 aa	Known RBP	21.2	■□□□□ 0.98
PTK2-231	ENST00000521332	MRPS9	P82933	396 aa	Known RBP	21.2	■□□□□ 0.98
PTK2-231	ENST00000521332	GRM4	Q14833	912 aa		21.2	■□□□□ 0.98
PTK2-231	ENST00000521332	SMC5	Q8IY18	1101 aa		21.2	■□□□□ 0.98
PTK2-231	ENST00000521332	RIOX1	Q9H6W3	641 aa		21.2	■□□□□ 0.98
PTK2-231	ENST00000521332	SUPT16H	Q9Y5B9	1047 aa	Known RBP	21.2	■□□□□ 0.98
PTK2-231	ENST00000521332	PNMA6F	A0A0J9YX94	578 aa		21.19	■□□□□ 0.98
PTK2-231	ENST00000521332	SPATA31C2	B4DYI2	1134 aa		21.19	■□□□□ 0.98
PTK2-231	ENST00000521332	FIBP	O43427	364 aa		21.19	■□□□□ 0.98
PTK2-231	ENST00000521332	STAM2	O75886	525 aa		21.19	■□□□□ 0.98
PTK2-231	ENST00000521332	GHR	P10912	638 aa		21.19	■□□□□ 0.98
PTK2-231	ENST00000521332	ZP2	Q05996	745 aa		21.19	■□□□□ 0.98
PTK2-231	ENST00000521332	SLC35G1	Q2M3R5	365 aa		21.19	■□□□□ 0.98
PTK2-231	ENST00000521332	LMBR1	Q8WVP7	490 aa		21.19	■□□□□ 0.98
PTK2-231	ENST00000521332	INPP4A	Q96PE3	977 aa	Predicted RBP	21.19	■□□□□ 0.98
PTK2-231	ENST00000521332	PRKAG3	Q9UGI9	489 aa		21.19	■□□□□ 0.98
PTK2-231	ENST00000521332	TELO2	Q9Y4R8	837 aa		21.19	■□□□□ 0.98
PTK2-231	ENST00000521332	COL4A6	Q14031	1691 aa		21.18	■□□□□ 0.98
PTK2-231	ENST00000521332	KAT6A	Q92794	2004 aa		21.18	■□□□□ 0.98
PTK2-231	ENST00000521332	ICAM3	P32942	547 aa		21.18	■□□□□ 0.98
PTK2-231	ENST00000521332	SMARCC2	Q8TAQ2	1214 aa		21.18	■□□□□ 0.98
PTK2-231	ENST00000521332	C11orf84	Q9BUA3	381 aa	Predicted RBP	21.18	■□□□□ 0.98
PTK2-231	ENST00000521332	IGFLR1	Q9H665	355 aa		21.18	■□□□□ 0.98

Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms