RNA–Protein interactions for RNA: ENST00000520887.1

FAM49B-218, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 2

Gene FAM49B, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-218ENST00000520887 PPARAQ07869 468 aa6.99□□□□□ -1.29
FAM49B-218ENST00000520887 ZNF211Q13398 564 aaPredicted RBP6.99□□□□□ -1.29
FAM49B-218ENST00000520887 SNAPC2Q13487 334 aa6.99□□□□□ -1.29
FAM49B-218ENST00000520887 ABCB5Q2M3G0 1257 aa6.99□□□□□ -1.29
FAM49B-218ENST00000520887 C8orf34Q49A92 452 aa6.99□□□□□ -1.29
FAM49B-218ENST00000520887 SBK1Q52WX2 424 aa6.99□□□□□ -1.29
FAM49B-218ENST00000520887 NOL9Q5SY16 702 aaKnown RBP6.99□□□□□ -1.29
FAM49B-218ENST00000520887 ADAMTSL4Q6UY14 1074 aa6.99□□□□□ -1.29
FAM49B-218ENST00000520887 TMEM179Q6ZVK1 233 aa6.99□□□□□ -1.29
FAM49B-218ENST00000520887 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.99□□□□□ -1.29
FAM49B-218ENST00000520887 NBPF11Q86T75 865 aa6.99□□□□□ -1.29
FAM49B-218ENST00000520887 IQCA1Q86XH1 822 aa6.99□□□□□ -1.29
FAM49B-218ENST00000520887 IFNL3Q8IZI9 196 aa6.99□□□□□ -1.29
FAM49B-218ENST00000520887 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.99□□□□□ -1.29
FAM49B-218ENST00000520887 POP1Q99575 1024 aaKnown RBP6.99□□□□□ -1.29
FAM49B-218ENST00000520887 DDX4Q9NQI0 724 aaKnown RBP6.99□□□□□ -1.29
FAM49B-218ENST00000520887 KANSL3Q9P2N6 904 aa6.99□□□□□ -1.29
FAM49B-218ENST00000520887 ISY1Q9ULR0 285 aaKnown RBP6.99□□□□□ -1.29
FAM49B-218ENST00000520887 WDR33Q9C0J8 1336 aaKnown RBP6.99□□□□□ -1.29
FAM49B-218ENST00000520887 CDK5RAP2Q96SN8 1893 aa6.98□□□□□ -1.29
FAM49B-218ENST00000520887 FSCN2O14926 492 aa6.98□□□□□ -1.29
FAM49B-218ENST00000520887 HYAL3O43820 417 aaPredicted RBP6.98□□□□□ -1.29
FAM49B-218ENST00000520887 USP2O75604 605 aaPredicted RBP6.98□□□□□ -1.29
FAM49B-218ENST00000520887 PDGFAP04085 211 aa6.98□□□□□ -1.29
FAM49B-218ENST00000520887 CETPP11597 493 aa6.98□□□□□ -1.29
FAM49B-218ENST00000520887 NPR3P17342 541 aa6.98□□□□□ -1.29
FAM49B-218ENST00000520887 CES1P23141 567 aa6.98□□□□□ -1.29
FAM49B-218ENST00000520887 CHMLP26374 656 aa6.98□□□□□ -1.29
FAM49B-218ENST00000520887 MZF1P28698 734 aaPredicted RBP6.98□□□□□ -1.29
FAM49B-218ENST00000520887 CAP2P40123 477 aa6.98□□□□□ -1.29
FAM49B-218ENST00000520887 EIF1AXP47813 144 aaKnown RBP6.98□□□□□ -1.29
FAM49B-218ENST00000520887 PPIL2Q13356 520 aa6.98□□□□□ -1.29
FAM49B-218ENST00000520887 VGLL4Q14135 290 aa6.98□□□□□ -1.29
FAM49B-218ENST00000520887 RAB3GAP1Q15042 981 aa6.98□□□□□ -1.29
FAM49B-218ENST00000520887 ARHGEF6Q15052 776 aa6.98□□□□□ -1.29
FAM49B-218ENST00000520887 Q6ZS46 218 aa6.98□□□□□ -1.29
FAM49B-218ENST00000520887 MFSD6Q6ZSS7 791 aa6.98□□□□□ -1.29
FAM49B-218ENST00000520887 SND1Q7KZF4 910 aaKnown RBP eCLIP6.98□□□□□ -1.29
FAM49B-218ENST00000520887 FASTKD5Q7L8L6 764 aaKnown RBP6.98□□□□□ -1.29
FAM49B-218ENST00000520887 C1orf127Q8N9H9 656 aa6.98□□□□□ -1.29
FAM49B-218ENST00000520887 KLHL23Q8NBE8 558 aa6.98□□□□□ -1.29
FAM49B-218ENST00000520887 ZNF384Q8TF68 577 aa6.98□□□□□ -1.29
FAM49B-218ENST00000520887 ESR2Q92731 530 aa6.98□□□□□ -1.29
FAM49B-218ENST00000520887 OPTNQ96CV9 577 aa6.98□□□□□ -1.29
FAM49B-218ENST00000520887 FAM227BQ96M60 508 aa6.98□□□□□ -1.29
FAM49B-218ENST00000520887 TEPSINQ96N21 525 aa6.98□□□□□ -1.29
FAM49B-218ENST00000520887 KRT23Q9C075 422 aa6.98□□□□□ -1.29
FAM49B-218ENST00000520887 ADAM19Q9H013 955 aa6.98□□□□□ -1.29
FAM49B-218ENST00000520887 SH2B1Q9NRF2 756 aaPredicted RBP6.98□□□□□ -1.29
FAM49B-218ENST00000520887 KCNK4Q9NYG8 393 aa6.98□□□□□ -1.29
FAM49B-218ENST00000520887 SALL4Q9UJQ4 1053 aa6.98□□□□□ -1.29
FAM49B-218ENST00000520887 RNF112Q9ULX5 631 aa6.98□□□□□ -1.29
FAM49B-218ENST00000520887 CTDP1Q9Y5B0 961 aaPredicted RBP6.98□□□□□ -1.29
FAM49B-218ENST00000520887 BAZ2AQ9UIF9 1905 aaKnown RBP6.97□□□□□ -1.29
FAM49B-218ENST00000520887 ROBO3Q96MS0 1386 aa6.97□□□□□ -1.29
FAM49B-218ENST00000520887 GSG1L2A8MUP6 293 aa6.97□□□□□ -1.29
FAM49B-218ENST00000520887 C19orf81C9J6K1 198 aa6.97□□□□□ -1.29
FAM49B-218ENST00000520887 H3BRB1 525 aa6.97□□□□□ -1.29
FAM49B-218ENST00000520887 PRKAB2O43741 272 aa6.97□□□□□ -1.29
FAM49B-218ENST00000520887 RANBP6O60518 1105 aaKnown RBP6.97□□□□□ -1.29
FAM49B-218ENST00000520887 HSPD1P10809 573 aaKnown RBP6.97□□□□□ -1.29
FAM49B-218ENST00000520887 EPHA1P21709 976 aa6.97□□□□□ -1.29
FAM49B-218ENST00000520887 MPSTP25325 297 aa6.97□□□□□ -1.29
FAM49B-218ENST00000520887 FGD1P98174 961 aa6.97□□□□□ -1.29
FAM49B-218ENST00000520887 ATP2B2Q01814 1243 aa6.97□□□□□ -1.29
FAM49B-218ENST00000520887 ICA1Q05084 483 aa6.97□□□□□ -1.29
FAM49B-218ENST00000520887 MTMR3Q13615 1198 aa6.97□□□□□ -1.29
FAM49B-218ENST00000520887 KRT32Q14532 448 aa6.97□□□□□ -1.29
FAM49B-218ENST00000520887 ALX1Q15699 326 aa6.97□□□□□ -1.29
FAM49B-218ENST00000520887 DDX60LQ5H9U9 1706 aaKnown RBP6.97□□□□□ -1.29
FAM49B-218ENST00000520887 RRP12Q5JTH9 1297 aaKnown RBP6.97□□□□□ -1.29
FAM49B-218ENST00000520887 C12orf60Q5U649 245 aa6.97□□□□□ -1.29
FAM49B-218ENST00000520887 CST9Q5W186 159 aa6.97□□□□□ -1.29
FAM49B-218ENST00000520887 ALKBH2Q6NS38 261 aa6.97□□□□□ -1.29
FAM49B-218ENST00000520887 CYP4F22Q6NT55 531 aa6.97□□□□□ -1.29
FAM49B-218ENST00000520887 CTR9Q6PD62 1173 aa6.97□□□□□ -1.29
FAM49B-218ENST00000520887 CCDC129Q6ZRS4 1044 aa6.97□□□□□ -1.29
FAM49B-218ENST00000520887 C16orf86Q6ZW13 317 aa6.97□□□□□ -1.29
FAM49B-218ENST00000520887 RASAL3Q86YV0 1011 aa6.97□□□□□ -1.29
FAM49B-218ENST00000520887 PMEPA1Q969W9 287 aa6.97□□□□□ -1.29
FAM49B-218ENST00000520887 WNK4Q96J92 1243 aa6.97□□□□□ -1.29
FAM49B-218ENST00000520887 SEC62Q99442 399 aaKnown RBP6.97□□□□□ -1.29
FAM49B-218ENST00000520887 UBAC1Q9BSL1 405 aa6.97□□□□□ -1.29
FAM49B-218ENST00000520887 TUT1Q9H6E5 874 aaKnown RBP6.97□□□□□ -1.29
FAM49B-218ENST00000520887 CWC22Q9HCG8 908 aaKnown RBP6.97□□□□□ -1.29
FAM49B-218ENST00000520887 ZBTB21Q9ULJ3 1066 aa6.97□□□□□ -1.29
FAM49B-218ENST00000520887 ATAD5Q96QE3 1844 aa6.97□□□□□ -1.29
FAM49B-218ENST00000520887 SSC5DA1L4H1 1573 aa6.96□□□□□ -1.29
FAM49B-218ENST00000520887 CCL15-CCL14A0A0B4J2E2 113 aa6.96□□□□□ -1.3
FAM49B-218ENST00000520887 A6NHS1 94 aa6.96□□□□□ -1.3
FAM49B-218ENST00000520887 CXCL11O14625 94 aa6.96□□□□□ -1.3
FAM49B-218ENST00000520887 TM4SF5O14894 197 aa6.96□□□□□ -1.3
FAM49B-218ENST00000520887 SGSM2O43147 1006 aa6.96□□□□□ -1.3
FAM49B-218ENST00000520887 EPB41L2O43491 1005 aaKnown RBP6.96□□□□□ -1.3
FAM49B-218ENST00000520887 GH2P01242 217 aa6.96□□□□□ -1.3
FAM49B-218ENST00000520887 CDK8P49336 464 aa6.96□□□□□ -1.3
FAM49B-218ENST00000520887 IRX3P78415 501 aaPredicted RBP6.96□□□□□ -1.3
FAM49B-218ENST00000520887 FMR1Q06787 632 aaKnown RBP eCLIP6.96□□□□□ -1.3
FAM49B-218ENST00000520887 KIF22Q14807 665 aa6.96□□□□□ -1.3
FAM49B-218ENST00000520887 ECM1Q16610 540 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms