RNA–Protein interactions for RNA: ENST00000520522.1

CTNNA1-224, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 390 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-224ENST00000520522 RAD9AQ99638 391 aa10.29□□□□□ -0.76
CTNNA1-224ENST00000520522 ZBED2Q9BTP6 218 aa10.29□□□□□ -0.76
CTNNA1-224ENST00000520522 SPZ1Q9BXG8 430 aa10.29□□□□□ -0.76
CTNNA1-224ENST00000520522 MLXIPQ9HAP2 919 aa10.29□□□□□ -0.76
CTNNA1-224ENST00000520522 SENP2Q9HC62 589 aa10.29□□□□□ -0.76
CTNNA1-224ENST00000520522 C17orf102A2RUQ5 167 aa10.28□□□□□ -0.76
CTNNA1-224ENST00000520522 LCHNA4D1U4 455 aa10.28□□□□□ -0.76
CTNNA1-224ENST00000520522 H3BRB1 525 aa10.28□□□□□ -0.76
CTNNA1-224ENST00000520522 DDAH1O94760 285 aa10.28□□□□□ -0.76
CTNNA1-224ENST00000520522 LGALS2P05162 132 aa10.28□□□□□ -0.76
CTNNA1-224ENST00000520522 SMARCA1P28370 1054 aa10.28□□□□□ -0.76
CTNNA1-224ENST00000520522 ANTXR2P58335 489 aa10.28□□□□□ -0.76
CTNNA1-224ENST00000520522 ZNF200P98182 395 aaPredicted RBP10.28□□□□□ -0.76
CTNNA1-224ENST00000520522 NEDD9Q14511 834 aa10.28□□□□□ -0.76
CTNNA1-224ENST00000520522 HIC1Q14526 733 aa10.28□□□□□ -0.76
CTNNA1-224ENST00000520522 SKIV2LQ15477 1246 aaKnown RBP10.28□□□□□ -0.76
CTNNA1-224ENST00000520522 TCTN1Q2MV58 587 aa10.28□□□□□ -0.76
CTNNA1-224ENST00000520522 XRRA1Q6P2D8 792 aa10.28□□□□□ -0.76
CTNNA1-224ENST00000520522 METTL7BQ6UX53 244 aa10.28□□□□□ -0.76
CTNNA1-224ENST00000520522 FCHSD1Q86WN1 690 aa10.28□□□□□ -0.76
CTNNA1-224ENST00000520522 IGDCC4Q8TDY8 1250 aa10.28□□□□□ -0.76
CTNNA1-224ENST00000520522 GPKOWQ92917 476 aaPredicted RBP eCLIP10.28□□□□□ -0.76
CTNNA1-224ENST00000520522 MAP4K1Q92918 833 aa10.28□□□□□ -0.76
CTNNA1-224ENST00000520522 TGS1Q96RS0 853 aaKnown RBP10.28□□□□□ -0.76
CTNNA1-224ENST00000520522 USP26Q9BXU7 913 aa10.28□□□□□ -0.76
CTNNA1-224ENST00000520522 TUT1Q9H6E5 874 aaKnown RBP10.28□□□□□ -0.76
CTNNA1-224ENST00000520522 TAF6LQ9Y6J9 622 aa10.28□□□□□ -0.76
CTNNA1-224ENST00000520522 MICAL3Q7RTP6 2002 aa10.28□□□□□ -0.76
CTNNA1-224ENST00000520522 LINC01553A4QN01 128 aa10.27□□□□□ -0.77
CTNNA1-224ENST00000520522 RSPH10B2B2RC85 870 aa10.27□□□□□ -0.77
CTNNA1-224ENST00000520522 SPATA31C2B4DYI2 1134 aa10.27□□□□□ -0.77
CTNNA1-224ENST00000520522 PIK3CDO00329 1044 aa10.27□□□□□ -0.77
CTNNA1-224ENST00000520522 NOP56O00567 594 aaKnown RBP10.27□□□□□ -0.77
CTNNA1-224ENST00000520522 FIBPO43427 364 aa10.27□□□□□ -0.77
CTNNA1-224ENST00000520522 RSPH10BP0C881 870 aa10.27□□□□□ -0.77
CTNNA1-224ENST00000520522 SMIM10L2AP0DMW4 78 aa10.27□□□□□ -0.77
CTNNA1-224ENST00000520522 SMIM10L2BP0DMW5 78 aa10.27□□□□□ -0.77
CTNNA1-224ENST00000520522 KIF5BP33176 963 aa10.27□□□□□ -0.77
CTNNA1-224ENST00000520522 ERVK-21P61565 698 aa10.27□□□□□ -0.77
CTNNA1-224ENST00000520522 MRPS9P82933 396 aaKnown RBP10.27□□□□□ -0.77
CTNNA1-224ENST00000520522 TFF2Q03403 129 aa10.27□□□□□ -0.77
CTNNA1-224ENST00000520522 SEMA3FQ13275 785 aa10.27□□□□□ -0.77
CTNNA1-224ENST00000520522 KRT40Q6A162 431 aa10.27□□□□□ -0.77
CTNNA1-224ENST00000520522 SPRED2Q7Z698 418 aa10.27□□□□□ -0.77
CTNNA1-224ENST00000520522 CTCFLQ8NI51 663 aaPredicted RBP10.27□□□□□ -0.77
CTNNA1-224ENST00000520522 GDPD5Q8WTR4 605 aa10.27□□□□□ -0.77
CTNNA1-224ENST00000520522 ATP6V0A1Q93050 837 aa10.27□□□□□ -0.77
CTNNA1-224ENST00000520522 SENP7Q9BQF6 1050 aa10.27□□□□□ -0.77
CTNNA1-224ENST00000520522 LZTS2Q9BRK4 669 aa10.27□□□□□ -0.77
CTNNA1-224ENST00000520522 LY9Q9HBG7 655 aa10.27□□□□□ -0.77
CTNNA1-224ENST00000520522 COL4A6Q14031 1691 aa10.27□□□□□ -0.77
CTNNA1-224ENST00000520522 SIP14410 1827 aa10.26□□□□□ -0.77
CTNNA1-224ENST00000520522 SORBS3O60504 671 aa10.26□□□□□ -0.77
CTNNA1-224ENST00000520522 AMHP03971 560 aa10.26□□□□□ -0.77
CTNNA1-224ENST00000520522 GNAT1P11488 350 aa10.26□□□□□ -0.77
CTNNA1-224ENST00000520522 THPOP40225 353 aa10.26□□□□□ -0.77
CTNNA1-224ENST00000520522 GNAQP50148 359 aa10.26□□□□□ -0.77
CTNNA1-224ENST00000520522 KCNQ1P51787 676 aa10.26□□□□□ -0.77
CTNNA1-224ENST00000520522 HTRA4P83105 476 aaPredicted RBP10.26□□□□□ -0.77
CTNNA1-224ENST00000520522 PLEKHG4Q58EX7 1191 aa10.26□□□□□ -0.77
CTNNA1-224ENST00000520522 PCNX4Q63HM2 1172 aa10.26□□□□□ -0.77
CTNNA1-224ENST00000520522 CASC1Q6TDU7 716 aa10.26□□□□□ -0.77
CTNNA1-224ENST00000520522 TMCO2Q7Z6W1 182 aaPredicted RBP10.26□□□□□ -0.77
CTNNA1-224ENST00000520522 ZNF654Q8IZM8 581 aa10.26□□□□□ -0.77
CTNNA1-224ENST00000520522 DBF4BQ8NFT6 615 aa10.26□□□□□ -0.77
CTNNA1-224ENST00000520522 SP7Q8TDD2 431 aaPredicted RBP10.26□□□□□ -0.77
CTNNA1-224ENST00000520522 CUL5Q93034 780 aa10.26□□□□□ -0.77
CTNNA1-224ENST00000520522 HLA-CQ95604 372 aa10.26□□□□□ -0.77
CTNNA1-224ENST00000520522 RRP36Q96EU6 259 aaKnown RBP10.26□□□□□ -0.77
CTNNA1-224ENST00000520522 ZFP91Q96JP5 570 aaPredicted RBP10.26□□□□□ -0.77
CTNNA1-224ENST00000520522 GPR20Q99678 358 aa10.26□□□□□ -0.77
CTNNA1-224ENST00000520522 RNPEPQ9H4A4 650 aa10.26□□□□□ -0.77
CTNNA1-224ENST00000520522 SEC63Q9UGP8 760 aaKnown RBP10.26□□□□□ -0.77
CTNNA1-224ENST00000520522 ZNF215Q9UL58 517 aaPredicted RBP10.26□□□□□ -0.77
CTNNA1-224ENST00000520522 INSL6Q9Y581 213 aa10.26□□□□□ -0.77
CTNNA1-224ENST00000520522 RBM8AQ9Y5S9 174 aaKnown RBP10.26□□□□□ -0.77
CTNNA1-224ENST00000520522 TCF20Q9UGU0 1960 aaKnown RBP10.25□□□□□ -0.77
CTNNA1-224ENST00000520522 MEIS2O14770 477 aa10.25□□□□□ -0.77
CTNNA1-224ENST00000520522 TREHO43280 583 aa10.25□□□□□ -0.77
CTNNA1-224ENST00000520522 COL9A1P20849 921 aa10.25□□□□□ -0.77
CTNNA1-224ENST00000520522 ADAM17P78536 824 aa10.25□□□□□ -0.77
CTNNA1-224ENST00000520522 CYFIP1Q7L576 1253 aa10.25□□□□□ -0.77
CTNNA1-224ENST00000520522 NLRX1Q86UT6 975 aa10.25□□□□□ -0.77
CTNNA1-224ENST00000520522 TMTC2Q8N394 836 aa10.25□□□□□ -0.77
CTNNA1-224ENST00000520522 GIMAP8Q8ND71 665 aaPredicted RBP10.25□□□□□ -0.77
CTNNA1-224ENST00000520522 SMARCC2Q8TAQ2 1214 aa10.25□□□□□ -0.77
CTNNA1-224ENST00000520522 SEPT8Q92599 483 aa10.25□□□□□ -0.77
CTNNA1-224ENST00000520522 GPRASP2Q96D09 838 aa10.25□□□□□ -0.77
CTNNA1-224ENST00000520522 CDHR1Q96JP9 859 aa10.25□□□□□ -0.77
CTNNA1-224ENST00000520522 TMEM87BQ96K49 555 aa10.25□□□□□ -0.77
CTNNA1-224ENST00000520522 SAMD11Q96NU1 681 aa10.25□□□□□ -0.77
CTNNA1-224ENST00000520522 BCAS3Q9H6U6 928 aa10.25□□□□□ -0.77
CTNNA1-224ENST00000520522 SUGCTQ9HAC7 445 aa10.25□□□□□ -0.77
CTNNA1-224ENST00000520522 SUPT16HQ9Y5B9 1047 aaKnown RBP10.25□□□□□ -0.77
CTNNA1-224ENST00000520522 SH2B2O14492 632 aaPredicted RBP10.24□□□□□ -0.77
CTNNA1-224ENST00000520522 PRC1O43663 620 aa10.24□□□□□ -0.77
CTNNA1-224ENST00000520522 CALM1P0DP23 149 aa10.24□□□□□ -0.77
CTNNA1-224ENST00000520522 CALM2P0DP24 149 aa10.24□□□□□ -0.77
CTNNA1-224ENST00000520522 CALM3P0DP25 149 aa10.24□□□□□ -0.77
CTNNA1-224ENST00000520522 MCM5P33992 734 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms