RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 FIBPO43427 364 aa17.49■□□□□ 0.39
CSMD1-207ENST00000520451 PLEKHA8P1O95397 391 aa17.49■□□□□ 0.39
CSMD1-207ENST00000520451 SMIM10L2AP0DMW4 78 aa17.49■□□□□ 0.39
CSMD1-207ENST00000520451 SMIM10L2BP0DMW5 78 aa17.49■□□□□ 0.39
CSMD1-207ENST00000520451 SMARCA1P28370 1054 aa17.49■□□□□ 0.39
CSMD1-207ENST00000520451 THPOP40225 353 aa17.49■□□□□ 0.39
CSMD1-207ENST00000520451 GNAQP50148 359 aa17.49■□□□□ 0.39
CSMD1-207ENST00000520451 SEMA3FQ13275 785 aa17.49■□□□□ 0.39
CSMD1-207ENST00000520451 IKBKEQ14164 716 aa17.49■□□□□ 0.39
CSMD1-207ENST00000520451 NEDD9Q14511 834 aa17.49■□□□□ 0.39
CSMD1-207ENST00000520451 MBTPS1Q14703 1052 aa17.49■□□□□ 0.39
CSMD1-207ENST00000520451 SKIV2LQ15477 1246 aaKnown RBP17.49■□□□□ 0.39
CSMD1-207ENST00000520451 METTL7BQ6UX53 244 aa17.49■□□□□ 0.39
CSMD1-207ENST00000520451 TMTC2Q8N394 836 aa17.49■□□□□ 0.39
CSMD1-207ENST00000520451 IL27Q8NEV9 243 aa17.49■□□□□ 0.39
CSMD1-207ENST00000520451 ATP6V0A1Q93050 837 aa17.49■□□□□ 0.39
CSMD1-207ENST00000520451 TMEM87BQ96K49 555 aa17.49■□□□□ 0.39
CSMD1-207ENST00000520451 ESYT1Q9BSJ8 1104 aa17.49■□□□□ 0.39
CSMD1-207ENST00000520451 TNFRSF10AO00220 468 aa17.48■□□□□ 0.39
CSMD1-207ENST00000520451 PIK3CDO00329 1044 aa17.48■□□□□ 0.39
CSMD1-207ENST00000520451 EFCAB14O75071 495 aa17.48■□□□□ 0.39
CSMD1-207ENST00000520451 RXRAP19793 462 aa17.48■□□□□ 0.39
CSMD1-207ENST00000520451 POU3F3P20264 500 aaPredicted RBP17.48■□□□□ 0.39
CSMD1-207ENST00000520451 COL9A3Q14050 684 aaPredicted RBP17.48■□□□□ 0.39
CSMD1-207ENST00000520451 PCNX4Q63HM2 1172 aa17.48■□□□□ 0.39
CSMD1-207ENST00000520451 KRT40Q6A162 431 aa17.48■□□□□ 0.39
CSMD1-207ENST00000520451 SPRED2Q7Z698 418 aa17.48■□□□□ 0.39
CSMD1-207ENST00000520451 CMTR1Q8N1G2 835 aaKnown RBP17.48■□□□□ 0.39
CSMD1-207ENST00000520451 SRBD1Q8N5C6 995 aaKnown RBP17.48■□□□□ 0.39
CSMD1-207ENST00000520451 ADAMTS19Q8TE59 1207 aa17.48■□□□□ 0.39
CSMD1-207ENST00000520451 USP26Q9BXU7 913 aa17.48■□□□□ 0.39
CSMD1-207ENST00000520451 EMSYQ7Z589 1322 aa17.47■□□□□ 0.39
CSMD1-207ENST00000520451 PTPRSQ13332 1948 aa17.47■□□□□ 0.39
CSMD1-207ENST00000520451 RSPH10B2B2RC85 870 aa17.47■□□□□ 0.39
CSMD1-207ENST00000520451 MEIS2O14770 477 aa17.47■□□□□ 0.39
CSMD1-207ENST00000520451 LGR5O75473 907 aa17.47■□□□□ 0.39
CSMD1-207ENST00000520451 GJB5O95377 273 aa17.47■□□□□ 0.39
CSMD1-207ENST00000520451 RSPH10BP0C881 870 aa17.47■□□□□ 0.39
CSMD1-207ENST00000520451 HOXC8P31273 242 aa17.47■□□□□ 0.39
CSMD1-207ENST00000520451 SP4Q02446 784 aa17.47■□□□□ 0.39
CSMD1-207ENST00000520451 CREB3L3Q68CJ9 461 aa17.47■□□□□ 0.39
CSMD1-207ENST00000520451 XRRA1Q6P2D8 792 aa17.47■□□□□ 0.39
CSMD1-207ENST00000520451 RAB11FIP4Q86YS3 637 aa17.47■□□□□ 0.39
CSMD1-207ENST00000520451 GPR20Q99678 358 aa17.47■□□□□ 0.39
CSMD1-207ENST00000520451 ANO2Q9NQ90 1003 aa17.47■□□□□ 0.39
CSMD1-207ENST00000520451 PRRC2BQ5JSZ5 2229 aaKnown RBP17.47■□□□□ 0.39
CSMD1-207ENST00000520451 TREHO43280 583 aa17.46■□□□□ 0.39
CSMD1-207ENST00000520451 CALM1P0DP23 149 aa17.46■□□□□ 0.39
CSMD1-207ENST00000520451 CALM2P0DP24 149 aa17.46■□□□□ 0.39
CSMD1-207ENST00000520451 CALM3P0DP25 149 aa17.46■□□□□ 0.39
CSMD1-207ENST00000520451 LIFRP42702 1097 aa17.46■□□□□ 0.39
CSMD1-207ENST00000520451 GRB10Q13322 594 aa17.46■□□□□ 0.39
CSMD1-207ENST00000520451 UTP14CQ5TAP6 766 aaKnown RBP17.46■□□□□ 0.39
CSMD1-207ENST00000520451 FAM117BQ6P1L5 589 aa17.46■□□□□ 0.39
CSMD1-207ENST00000520451 NLRX1Q86UT6 975 aa17.46■□□□□ 0.39
CSMD1-207ENST00000520451 TRIM50Q86XT4 487 aa17.46■□□□□ 0.39
CSMD1-207ENST00000520451 RAD9AQ99638 391 aa17.46■□□□□ 0.39
CSMD1-207ENST00000520451 LRRC2Q9BYS8 371 aa17.46■□□□□ 0.39
CSMD1-207ENST00000520451 RNPEPQ9H4A4 650 aa17.46■□□□□ 0.39
CSMD1-207ENST00000520451 ZNF215Q9UL58 517 aaPredicted RBP17.46■□□□□ 0.39
CSMD1-207ENST00000520451 SLC12A7Q9Y666 1083 aa17.46■□□□□ 0.39
CSMD1-207ENST00000520451 GNAT1P11488 350 aa17.45■□□□□ 0.38
CSMD1-207ENST00000520451 TFF2Q03403 129 aa17.45■□□□□ 0.38
CSMD1-207ENST00000520451 NECTIN1Q15223 517 aa17.45■□□□□ 0.38
CSMD1-207ENST00000520451 DBF4BQ8NFT6 615 aa17.45■□□□□ 0.38
CSMD1-207ENST00000520451 UHRF1Q96T88 793 aaPredicted RBP17.45■□□□□ 0.38
CSMD1-207ENST00000520451 SENP7Q9BQF6 1050 aa17.45■□□□□ 0.38
CSMD1-207ENST00000520451 PSTPIP2Q9H939 334 aa17.45■□□□□ 0.38
CSMD1-207ENST00000520451 SETD4Q9NVD3 440 aa17.45■□□□□ 0.38
CSMD1-207ENST00000520451 MTUS1Q9ULD2 1270 aa17.45■□□□□ 0.38
CSMD1-207ENST00000520451 TELO2Q9Y4R8 837 aa17.45■□□□□ 0.38
CSMD1-207ENST00000520451 hCG_1642624A0A1W2PR95 340 aa17.44■□□□□ 0.38
CSMD1-207ENST00000520451 CTSHP09668 335 aa17.44■□□□□ 0.38
CSMD1-207ENST00000520451 UBE2SQ16763 222 aa17.44■□□□□ 0.38
CSMD1-207ENST00000520451 AAK1Q2M2I8 961 aa17.44■□□□□ 0.38
CSMD1-207ENST00000520451 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.44■□□□□ 0.38
CSMD1-207ENST00000520451 MICU3Q86XE3 530 aa17.44■□□□□ 0.38
CSMD1-207ENST00000520451 CCDC82Q8N4S0 544 aa17.44■□□□□ 0.38
CSMD1-207ENST00000520451 GDPD5Q8WTR4 605 aa17.44■□□□□ 0.38
CSMD1-207ENST00000520451 LINC01553A4QN01 128 aa17.43■□□□□ 0.38
CSMD1-207ENST00000520451 LPXNO60711 386 aa17.43■□□□□ 0.38
CSMD1-207ENST00000520451 CAND2O75155 1236 aa17.43■□□□□ 0.38
CSMD1-207ENST00000520451 AMHP03971 560 aa17.43■□□□□ 0.38
CSMD1-207ENST00000520451 ARHGAP4P98171 946 aa17.43■□□□□ 0.38
CSMD1-207ENST00000520451 PLEKHG4Q58EX7 1191 aa17.43■□□□□ 0.38
CSMD1-207ENST00000520451 TMTC3Q6ZXV5 915 aa17.43■□□□□ 0.38
CSMD1-207ENST00000520451 MYOCDQ8IZQ8 938 aa17.43■□□□□ 0.38
CSMD1-207ENST00000520451 FANCBQ8NB91 859 aa17.43■□□□□ 0.38
CSMD1-207ENST00000520451 GIMAP8Q8ND71 665 aaPredicted RBP17.43■□□□□ 0.38
CSMD1-207ENST00000520451 GPRASP2Q96D09 838 aa17.43■□□□□ 0.38
CSMD1-207ENST00000520451 CDHR1Q96JP9 859 aa17.43■□□□□ 0.38
CSMD1-207ENST00000520451 TGS1Q96RS0 853 aaKnown RBP17.43■□□□□ 0.38
CSMD1-207ENST00000520451 DOCK5Q9H7D0 1870 aa17.43■□□□□ 0.38
CSMD1-207ENST00000520451 COL4A4P53420 1690 aaPredicted RBP17.42■□□□□ 0.38
CSMD1-207ENST00000520451 SPDYE3A6NKU9 549 aa17.42■□□□□ 0.38
CSMD1-207ENST00000520451 ITGB5P18084 799 aa17.42■□□□□ 0.38
CSMD1-207ENST00000520451 KCNQ1P51787 676 aa17.42■□□□□ 0.38
CSMD1-207ENST00000520451 ERVK-21P61565 698 aa17.42■□□□□ 0.38
CSMD1-207ENST00000520451 MKRN4PQ13434 485 aaPredicted RBP17.42■□□□□ 0.38
CSMD1-207ENST00000520451 HEATR3Q7Z4Q2 680 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms