RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 H2AFY2Q9P0M6 372 aaPredicted RBP7.06□□□□□ -1.28
HMGB1P46-201ENST00000520062 SRPK3Q9UPE1 567 aa7.06□□□□□ -1.28
HMGB1P46-201ENST00000520062 TCRBV5S4A2TA0A5A2 114 aa7.05□□□□□ -1.28
HMGB1P46-201ENST00000520062 MAN2B1O00754 1011 aa7.05□□□□□ -1.28
HMGB1P46-201ENST00000520062 MAFKO60675 156 aa7.05□□□□□ -1.28
HMGB1P46-201ENST00000520062 CLASP2O75122 1294 aaKnown RBP7.05□□□□□ -1.28
HMGB1P46-201ENST00000520062 HIP1RO75146 1068 aa7.05□□□□□ -1.28
HMGB1P46-201ENST00000520062 CFBP00751 764 aa7.05□□□□□ -1.28
HMGB1P46-201ENST00000520062 FUCA1P04066 466 aa7.05□□□□□ -1.28
HMGB1P46-201ENST00000520062 KRT15P19012 456 aa7.05□□□□□ -1.28
HMGB1P46-201ENST00000520062 LSP1P33241 339 aa7.05□□□□□ -1.28
HMGB1P46-201ENST00000520062 RTP1P59025 263 aa7.05□□□□□ -1.28
HMGB1P46-201ENST00000520062 SMAD3P84022 425 aaKnown RBP7.05□□□□□ -1.28
HMGB1P46-201ENST00000520062 SMAD2Q15796 467 aaKnown RBP7.05□□□□□ -1.28
HMGB1P46-201ENST00000520062 CHRNA2Q15822 529 aa7.05□□□□□ -1.28
HMGB1P46-201ENST00000520062 ABCB5Q2M3G0 1257 aa7.05□□□□□ -1.28
HMGB1P46-201ENST00000520062 HSF5Q4G112 596 aaPredicted RBP7.05□□□□□ -1.28
HMGB1P46-201ENST00000520062 EMC4Q5J8M3 183 aa7.05□□□□□ -1.28
HMGB1P46-201ENST00000520062 ANGEL2Q5VTE6 544 aaKnown RBP7.05□□□□□ -1.28
HMGB1P46-201ENST00000520062 RASSF3Q86WH2 238 aa7.05□□□□□ -1.28
HMGB1P46-201ENST00000520062 PTRH1Q86Y79 214 aaKnown RBP7.05□□□□□ -1.28
HMGB1P46-201ENST00000520062 TCEAL8Q8IYN2 117 aa7.05□□□□□ -1.28
HMGB1P46-201ENST00000520062 KIAA1958Q8N8K9 716 aa7.05□□□□□ -1.28
HMGB1P46-201ENST00000520062 ZNF610Q8N9Z0 462 aa7.05□□□□□ -1.28
HMGB1P46-201ENST00000520062 CCDC120Q96HB5 630 aa7.05□□□□□ -1.28
HMGB1P46-201ENST00000520062 FUBP3Q96I24 572 aaKnown RBP eCLIP7.05□□□□□ -1.28
HMGB1P46-201ENST00000520062 RTFDC1Q9BY42 306 aaPredicted RBP7.05□□□□□ -1.28
HMGB1P46-201ENST00000520062 PCIF1Q9H4Z3 704 aa7.05□□□□□ -1.28
HMGB1P46-201ENST00000520062 PDLIM7Q9NR12 457 aa7.05□□□□□ -1.28
HMGB1P46-201ENST00000520062 ACSS2Q9NR19 701 aa7.05□□□□□ -1.28
HMGB1P46-201ENST00000520062 DSEQ9UL01 958 aa7.05□□□□□ -1.28
HMGB1P46-201ENST00000520062 B3GALT1Q9Y5Z6 326 aa7.05□□□□□ -1.28
HMGB1P46-201ENST00000520062 NKRFO15226 690 aaKnown RBP eCLIP7.04□□□□□ -1.28
HMGB1P46-201ENST00000520062 DYRK3O43781 588 aa7.04□□□□□ -1.28
HMGB1P46-201ENST00000520062 USP2O75604 605 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P46-201ENST00000520062 KRT37O76014 449 aa7.04□□□□□ -1.28
HMGB1P46-201ENST00000520062 GDF11O95390 407 aa7.04□□□□□ -1.28
HMGB1P46-201ENST00000520062 CYP17A1P05093 508 aa7.04□□□□□ -1.28
HMGB1P46-201ENST00000520062 U2AF1L5P0DN76 240 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P46-201ENST00000520062 COL6A2P12110 1019 aa7.04□□□□□ -1.28
HMGB1P46-201ENST00000520062 HOXA10P31260 410 aaPredicted RBP7.04□□□□□ -1.28
HMGB1P46-201ENST00000520062 GRIK1P39086 918 aa7.04□□□□□ -1.28
HMGB1P46-201ENST00000520062 SLC6A11P48066 632 aa7.04□□□□□ -1.28
HMGB1P46-201ENST00000520062 U2AF1Q01081 240 aaKnown RBP eCLIP7.04□□□□□ -1.28
HMGB1P46-201ENST00000520062 LRRC32Q14392 662 aa7.04□□□□□ -1.28
HMGB1P46-201ENST00000520062 PTPN21Q16825 1174 aa7.04□□□□□ -1.28
HMGB1P46-201ENST00000520062 FAM102BQ5T8I3 360 aa7.04□□□□□ -1.28
HMGB1P46-201ENST00000520062 GALNT18Q6P9A2 607 aa7.04□□□□□ -1.28
HMGB1P46-201ENST00000520062 INTS5Q6P9B9 1019 aaKnown RBP7.04□□□□□ -1.28
HMGB1P46-201ENST00000520062 EP400NLQ6ZTU2 488 aa7.04□□□□□ -1.28
HMGB1P46-201ENST00000520062 CEP128Q6ZU80 1094 aa7.04□□□□□ -1.28
HMGB1P46-201ENST00000520062 SPPL2CQ8IUH8 684 aa7.04□□□□□ -1.28
HMGB1P46-201ENST00000520062 CCDC146Q8IYE0 955 aa7.04□□□□□ -1.28
HMGB1P46-201ENST00000520062 ZZZ3Q8IYH5 903 aa7.04□□□□□ -1.28
HMGB1P46-201ENST00000520062 PIP4K2CQ8TBX8 421 aa7.04□□□□□ -1.28
HMGB1P46-201ENST00000520062 SH3RF2Q8TEC5 729 aa7.04□□□□□ -1.28
HMGB1P46-201ENST00000520062 DLG3Q92796 817 aa7.04□□□□□ -1.28
HMGB1P46-201ENST00000520062 ALPK1Q96QP1 1244 aa7.04□□□□□ -1.28
HMGB1P46-201ENST00000520062 VTA1Q9NP79 307 aa7.04□□□□□ -1.28
HMGB1P46-201ENST00000520062 LUC7LQ9NQ29 371 aaKnown RBP7.04□□□□□ -1.28
HMGB1P46-201ENST00000520062 GABBR1Q9UBS5 961 aa7.04□□□□□ -1.28
HMGB1P46-201ENST00000520062 EBF1Q9UH73 591 aa7.04□□□□□ -1.28
HMGB1P46-201ENST00000520062 ZNF180Q9UJW8 692 aa7.04□□□□□ -1.28
HMGB1P46-201ENST00000520062 TMEM59LQ9UK28 342 aa7.04□□□□□ -1.28
HMGB1P46-201ENST00000520062 ACSL6Q9UKU0 697 aa7.04□□□□□ -1.28
HMGB1P46-201ENST00000520062 ZNF652Q9Y2D9 606 aa7.04□□□□□ -1.28
HMGB1P46-201ENST00000520062 RWDD3Q9Y3V2 267 aa7.04□□□□□ -1.28
HMGB1P46-201ENST00000520062 TAF6LQ9Y6J9 622 aa7.04□□□□□ -1.28
HMGB1P46-201ENST00000520062 A0A1W2PQ27 194 aa7.03□□□□□ -1.28
HMGB1P46-201ENST00000520062 A0A1W2PQ64 194 aa7.03□□□□□ -1.28
HMGB1P46-201ENST00000520062 A0A1W2PQC6 194 aa7.03□□□□□ -1.28
HMGB1P46-201ENST00000520062 A0A1W2PQD8 194 aa7.03□□□□□ -1.28
HMGB1P46-201ENST00000520062 TRIM75PA6NK02 468 aa7.03□□□□□ -1.28
HMGB1P46-201ENST00000520062 FZD9O00144 591 aa7.03□□□□□ -1.28
HMGB1P46-201ENST00000520062 DVL2O14641 736 aa7.03□□□□□ -1.28
HMGB1P46-201ENST00000520062 NRDCO43847 1150 aa7.03□□□□□ -1.28
HMGB1P46-201ENST00000520062 PRNPP04156 253 aa7.03□□□□□ -1.28
HMGB1P46-201ENST00000520062 MYBL2P10244 700 aa7.03□□□□□ -1.28
HMGB1P46-201ENST00000520062 GJA4P35212 333 aa7.03□□□□□ -1.28
HMGB1P46-201ENST00000520062 IARSP41252 1262 aaKnown RBP7.03□□□□□ -1.28
HMGB1P46-201ENST00000520062 EPHA5P54756 1037 aa7.03□□□□□ -1.28
HMGB1P46-201ENST00000520062 TMEM240Q5SV17 173 aa7.03□□□□□ -1.28
HMGB1P46-201ENST00000520062 CC2D1AQ6P1N0 951 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P46-201ENST00000520062 TMEM151AQ8N4L1 468 aa7.03□□□□□ -1.28
HMGB1P46-201ENST00000520062 PDZD8Q8NEN9 1154 aa7.03□□□□□ -1.28
HMGB1P46-201ENST00000520062 USP33Q8TEY7 942 aa7.03□□□□□ -1.28
HMGB1P46-201ENST00000520062 BCL7CQ8WUZ0 217 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P46-201ENST00000520062 ELF4Q99607 663 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P46-201ENST00000520062 CHMP4AQ9BY43 222 aa7.03□□□□□ -1.28
HMGB1P46-201ENST00000520062 RHOBTB2Q9BYZ6 727 aa7.03□□□□□ -1.28
HMGB1P46-201ENST00000520062 PDGFDQ9GZP0 370 aaPredicted RBP7.03□□□□□ -1.28
HMGB1P46-201ENST00000520062 ADAMTS10Q9H324 1103 aa7.03□□□□□ -1.28
HMGB1P46-201ENST00000520062 C14orf119Q9NWQ9 140 aa7.03□□□□□ -1.28
HMGB1P46-201ENST00000520062 SLAMF8Q9P0V8 285 aa7.03□□□□□ -1.28
HMGB1P46-201ENST00000520062 IMPACTQ9P2X3 320 aa7.03□□□□□ -1.28
HMGB1P46-201ENST00000520062 SLC5A6Q9Y289 635 aa7.03□□□□□ -1.28
HMGB1P46-201ENST00000520062 ATP23Q9Y6H3 246 aa7.03□□□□□ -1.28
HMGB1P46-201ENST00000520062 GOLGA6CA6NDK9 693 aa7.02□□□□□ -1.29
HMGB1P46-201ENST00000520062 GOLGA6BA6NDN3 693 aa7.02□□□□□ -1.29
HMGB1P46-201ENST00000520062 SNUPNO95149 360 aaKnown RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms