RNA–Protein interactions for RNA: ENST00000520058.1

SREK1-207, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-207ENST00000520058 C7orf31Q8N865 590 aa20.96■□□□□ 0.95
SREK1-207ENST00000520058 GDF15Q99988 308 aa20.96■□□□□ 0.95
SREK1-207ENST00000520058 KCNH7Q9NS40 1196 aa20.96■□□□□ 0.95
SREK1-207ENST00000520058 ZNF215Q9UL58 517 aaPredicted RBP20.96■□□□□ 0.95
SREK1-207ENST00000520058 TRIP12Q14669 1992 aaPredicted RBP20.96■□□□□ 0.95
SREK1-207ENST00000520058 TIMP1P01033 207 aa20.95■□□□□ 0.94
SREK1-207ENST00000520058 CD4P01730 458 aa20.95■□□□□ 0.94
SREK1-207ENST00000520058 HOXD8P13378 290 aaPredicted RBP20.95■□□□□ 0.94
SREK1-207ENST00000520058 PSEN2P49810 448 aa20.95■□□□□ 0.94
SREK1-207ENST00000520058 USP11P51784 963 aa20.95■□□□□ 0.94
SREK1-207ENST00000520058 SEMA3FQ13275 785 aa20.95■□□□□ 0.94
SREK1-207ENST00000520058 SH3RF1Q7Z6J0 888 aa20.95■□□□□ 0.94
SREK1-207ENST00000520058 PLA2G4DQ86XP0 818 aa20.95■□□□□ 0.94
SREK1-207ENST00000520058 DAGLBQ8NCG7 672 aa20.95■□□□□ 0.94
SREK1-207ENST00000520058 ALG1Q9BT22 464 aa20.95■□□□□ 0.94
SREK1-207ENST00000520058 GRIN2DO15399 1336 aa20.95■□□□□ 0.94
SREK1-207ENST00000520058 TRIM43BA6NCK2 446 aa20.94■□□□□ 0.94
SREK1-207ENST00000520058 MEIS1O00470 390 aa20.94■□□□□ 0.94
SREK1-207ENST00000520058 F2P00734 622 aa20.94■□□□□ 0.94
SREK1-207ENST00000520058 KCNA2P16389 499 aa20.94■□□□□ 0.94
SREK1-207ENST00000520058 SP4Q02446 784 aa20.94■□□□□ 0.94
SREK1-207ENST00000520058 MFSD10Q14728 455 aa20.94■□□□□ 0.94
SREK1-207ENST00000520058 TMEM199Q8N511 208 aa20.94■□□□□ 0.94
SREK1-207ENST00000520058 CCDC155Q8N6L0 562 aa20.94■□□□□ 0.94
SREK1-207ENST00000520058 SEPT1Q8WYJ6 367 aa20.94■□□□□ 0.94
SREK1-207ENST00000520058 BADQ92934 168 aa20.94■□□□□ 0.94
SREK1-207ENST00000520058 TRIM43Q96BQ3 446 aaPredicted RBP20.94■□□□□ 0.94
SREK1-207ENST00000520058 LLPHQ9BRT6 129 aaKnown RBP20.94■□□□□ 0.94
SREK1-207ENST00000520058 JPH1Q9HDC5 661 aaPredicted RBP20.94■□□□□ 0.94
SREK1-207ENST00000520058 PKD2L1Q9P0L9 805 aa20.94■□□□□ 0.94
SREK1-207ENST00000520058 TBX21Q9UL17 535 aa20.94■□□□□ 0.94
SREK1-207ENST00000520058 NFASCO94856 1347 aa20.94■□□□□ 0.94
SREK1-207ENST00000520058 CCDC194A0A1B0GVG4 234 aa20.93■□□□□ 0.94
SREK1-207ENST00000520058 H3BRB1 525 aa20.93■□□□□ 0.94
SREK1-207ENST00000520058 B4GALT4O60513 344 aa20.93■□□□□ 0.94
SREK1-207ENST00000520058 LARGE1O95461 756 aa20.93■□□□□ 0.94
SREK1-207ENST00000520058 LGALS2P05162 132 aa20.93■□□□□ 0.94
SREK1-207ENST00000520058 ZNF286BP0CG31 522 aa20.93■□□□□ 0.94
SREK1-207ENST00000520058 MCM2P49736 904 aa20.93■□□□□ 0.94
SREK1-207ENST00000520058 NONOQ15233 471 aaKnown RBP eCLIP20.93■□□□□ 0.94
SREK1-207ENST00000520058 KIAA0753Q2KHM9 967 aa20.93■□□□□ 0.94
SREK1-207ENST00000520058 KRT25Q7Z3Z0 450 aa20.93■□□□□ 0.94
SREK1-207ENST00000520058 SESTD1Q86VW0 696 aa20.93■□□□□ 0.94
SREK1-207ENST00000520058 NSUN7Q8NE18 718 aaKnown RBP20.93■□□□□ 0.94
SREK1-207ENST00000520058 RASGRP4Q8TDF6 673 aa20.93■□□□□ 0.94
SREK1-207ENST00000520058 TNPO1Q92973 898 aaKnown RBP20.93■□□□□ 0.94
SREK1-207ENST00000520058 KIF2CQ99661 725 aa20.93■□□□□ 0.94
SREK1-207ENST00000520058 GPR20Q99678 358 aa20.93■□□□□ 0.94
SREK1-207ENST00000520058 PHF20Q9BVI0 1012 aa20.93■□□□□ 0.94
SREK1-207ENST00000520058 TRPV6Q9H1D0 765 aa20.93■□□□□ 0.94
SREK1-207ENST00000520058 HIPK3Q9H422 1215 aa20.93■□□□□ 0.94
SREK1-207ENST00000520058 TUT1Q9H6E5 874 aaKnown RBP20.93■□□□□ 0.94
SREK1-207ENST00000520058 SLC9A2Q9UBY0 812 aa20.93■□□□□ 0.94
SREK1-207ENST00000520058 ATP9AO75110 1047 aa20.92■□□□□ 0.94
SREK1-207ENST00000520058 CTDNEP1O95476 244 aa20.92■□□□□ 0.94
SREK1-207ENST00000520058 FPGSQ05932 587 aa20.92■□□□□ 0.94
SREK1-207ENST00000520058 HABP4Q5JVS0 413 aaKnown RBP20.92■□□□□ 0.94
SREK1-207ENST00000520058 KAT2BQ92831 832 aa20.92■□□□□ 0.94
SREK1-207ENST00000520058 AIFM3Q96NN9 605 aa20.92■□□□□ 0.94
SREK1-207ENST00000520058 AZI2Q9H6S1 392 aa20.92■□□□□ 0.94
SREK1-207ENST00000520058 AGO4Q9HCK5 861 aaKnown RBP20.92■□□□□ 0.94
SREK1-207ENST00000520058 WDR81Q562E7 1941 aa20.92■□□□□ 0.94
SREK1-207ENST00000520058 GNAT1P11488 350 aa20.91■□□□□ 0.94
SREK1-207ENST00000520058 CIITAP33076 1130 aa20.91■□□□□ 0.94
SREK1-207ENST00000520058 TCF7P36402 384 aaPredicted RBP20.91■□□□□ 0.94
SREK1-207ENST00000520058 HMGN5P82970 282 aaKnown RBP20.91■□□□□ 0.94
SREK1-207ENST00000520058 BFSP2Q13515 415 aa20.91■□□□□ 0.94
SREK1-207ENST00000520058 PTGISQ16647 500 aa20.91■□□□□ 0.94
SREK1-207ENST00000520058 MFSD5Q6N075 450 aa20.91■□□□□ 0.94
SREK1-207ENST00000520058 CCDC83Q8IWF9 413 aa20.91■□□□□ 0.94
SREK1-207ENST00000520058 TDHQ8IZJ6 230 aa20.91■□□□□ 0.94
SREK1-207ENST00000520058 CYP2W1Q8TAV3 490 aa20.91■□□□□ 0.94
SREK1-207ENST00000520058 TBCKQ8TEA7 893 aa20.91■□□□□ 0.94
SREK1-207ENST00000520058 CRYGNQ8WXF5 182 aa20.91■□□□□ 0.94
SREK1-207ENST00000520058 TBC1D32Q96NH3 1257 aa20.91■□□□□ 0.94
SREK1-207ENST00000520058 NAP1L4Q99733 375 aaKnown RBP20.91■□□□□ 0.94
SREK1-207ENST00000520058 ZNF577Q9BSK1 485 aa20.91■□□□□ 0.94
SREK1-207ENST00000520058 PPP1R12CQ9BZL4 782 aa20.91■□□□□ 0.94
SREK1-207ENST00000520058 TBC1D22BQ9NU19 505 aa20.91■□□□□ 0.94
SREK1-207ENST00000520058 TRMT13Q9NUP7 481 aaKnown RBP20.91■□□□□ 0.94
SREK1-207ENST00000520058 KCNJ14Q9UNX9 436 aa20.91■□□□□ 0.94
SREK1-207ENST00000520058 FAM86B1E9PN63 330 aa20.9■□□□□ 0.94
SREK1-207ENST00000520058 HAS3O00219 553 aa20.9■□□□□ 0.94
SREK1-207ENST00000520058 IPO5O00410 1097 aaKnown RBP20.9■□□□□ 0.94
SREK1-207ENST00000520058 FAM86B2P0C5J1 330 aa20.9■□□□□ 0.94
SREK1-207ENST00000520058 ARP10275 920 aa20.9■□□□□ 0.94
SREK1-207ENST00000520058 KRT2P35908 639 aa20.9■□□□□ 0.94
SREK1-207ENST00000520058 PPIGQ13427 754 aaKnown RBP eCLIP20.9■□□□□ 0.947e-11■■■□□ 16.4
SREK1-207ENST00000520058 SAFBQ15424 915 aaKnown RBP eCLIP20.9■□□□□ 0.94
SREK1-207ENST00000520058 PRR16Q569H4 304 aa20.9■□□□□ 0.94
SREK1-207ENST00000520058 UTP14CQ5TAP6 766 aaKnown RBP20.9■□□□□ 0.94
SREK1-207ENST00000520058 FAM184AQ8NB25 1140 aa20.9■□□□□ 0.94
SREK1-207ENST00000520058 RETREG2Q8NC44 543 aa20.9■□□□□ 0.94
SREK1-207ENST00000520058 GLG1Q92896 1179 aa20.9■□□□□ 0.94
SREK1-207ENST00000520058 C16orf70Q9BSU1 422 aa20.9■□□□□ 0.94
SREK1-207ENST00000520058 PRO3102Q9H379 93 aa20.9■□□□□ 0.94
SREK1-207ENST00000520058 SMARCAD1Q9H4L7 1026 aa20.9■□□□□ 0.94
SREK1-207ENST00000520058 GTF2IRD1Q9UHL9 959 aa20.9■□□□□ 0.94
SREK1-207ENST00000520058 KIF3AQ9Y496 699 aa20.9■□□□□ 0.94
SREK1-207ENST00000520058 BACH2Q9BYV9 841 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms