RNA–Protein interactions for RNA: ENST00000519617.1

CCNC-208, Transcript of cyclin C, humanhuman

TSL 3

Gene CCNC, Length 246 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNC-208ENST00000519617 MEFVO15553 781 aaPredicted RBP3.1□□□□□ -1.91
CCNC-208ENST00000519617 KLHL18O94889 574 aa3.1□□□□□ -1.91
CCNC-208ENST00000519617 CNOT4O95628 575 aaKnown RBP3.1□□□□□ -1.91
CCNC-208ENST00000519617 CHGBP05060 677 aa3.1□□□□□ -1.91
CCNC-208ENST00000519617 LSAMPQ13449 338 aa3.1□□□□□ -1.91
CCNC-208ENST00000519617 HS1BP3Q53T59 392 aa3.1□□□□□ -1.91
CCNC-208ENST00000519617 MIIPQ5JXC2 388 aa3.1□□□□□ -1.91
CCNC-208ENST00000519617 ACBD5Q5T8D3 534 aaPredicted RBP3.1□□□□□ -1.91
CCNC-208ENST00000519617 PROSER1Q86XN7 944 aa3.1□□□□□ -1.91
CCNC-208ENST00000519617 PHOSPHO1Q8TCT1 267 aa3.1□□□□□ -1.91
CCNC-208ENST00000519617 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.1□□□□□ -1.91
CCNC-208ENST00000519617 ZNF341Q9BYN7 854 aa3.1□□□□□ -1.91
CCNC-208ENST00000519617 SMOC1Q9H4F8 434 aa3.1□□□□□ -1.91
CCNC-208ENST00000519617 FOXS1O43638 330 aa3.09□□□□□ -1.91
CCNC-208ENST00000519617 DGKIO75912 1065 aa3.09□□□□□ -1.91
CCNC-208ENST00000519617 CPP00450 1065 aa3.09□□□□□ -1.91
CCNC-208ENST00000519617 LTBRP36941 435 aa3.09□□□□□ -1.91
CCNC-208ENST00000519617 GJA8P48165 433 aa3.09□□□□□ -1.91
CCNC-208ENST00000519617 NASPP49321 788 aaPredicted RBP3.09□□□□□ -1.91
CCNC-208ENST00000519617 FHL2Q14192 279 aa3.09□□□□□ -1.91
CCNC-208ENST00000519617 PRKD1Q15139 912 aaPredicted RBP3.09□□□□□ -1.91
CCNC-208ENST00000519617 CYP4F22Q6NT55 531 aa3.09□□□□□ -1.91
CCNC-208ENST00000519617 TCTN3Q6NUS6 607 aa3.09□□□□□ -1.91
CCNC-208ENST00000519617 TMC5Q6UXY8 1006 aa3.09□□□□□ -1.91
CCNC-208ENST00000519617 Q6ZUG5 572 aa3.09□□□□□ -1.91
CCNC-208ENST00000519617 METTL16Q86W50 562 aaKnown RBP3.09□□□□□ -1.91
CCNC-208ENST00000519617 FAM169BQ8N8A8 192 aa3.09□□□□□ -1.91
CCNC-208ENST00000519617 DTX3Q8N9I9 347 aa3.09□□□□□ -1.91
CCNC-208ENST00000519617 NUDT10Q8NFP7 164 aa3.09□□□□□ -1.91
CCNC-208ENST00000519617 TTLL11Q8NHH1 800 aa3.09□□□□□ -1.91
CCNC-208ENST00000519617 BTN2A2Q8WVV5 523 aa3.09□□□□□ -1.91
CCNC-208ENST00000519617 ZNF503Q96F45 646 aa3.09□□□□□ -1.91
CCNC-208ENST00000519617 NUDT11Q96G61 164 aa3.09□□□□□ -1.91
CCNC-208ENST00000519617 AJUBAQ96IF1 538 aa3.09□□□□□ -1.91
CCNC-208ENST00000519617 LGR4Q9BXB1 951 aa3.09□□□□□ -1.91
CCNC-208ENST00000519617 EPB41L1Q9H4G0 881 aa3.09□□□□□ -1.91
CCNC-208ENST00000519617 MYOTQ9UBF9 498 aa3.09□□□□□ -1.91
CCNC-208ENST00000519617 PCDHA2Q9Y5H9 948 aa3.09□□□□□ -1.91
CCNC-208ENST00000519617 SLC4A7Q9Y6M7 1214 aa3.09□□□□□ -1.91
CCNC-208ENST00000519617 SMARCA4P51532 1647 aa3.08□□□□□ -1.92
CCNC-208ENST00000519617 NPIPB8E9PQR5 432 aa3.08□□□□□ -1.92
CCNC-208ENST00000519617 SCAMP3O14828 347 aaKnown RBP3.08□□□□□ -1.92
CCNC-208ENST00000519617 TBX1O43435 398 aa3.08□□□□□ -1.92
CCNC-208ENST00000519617 MAFKO60675 156 aa3.08□□□□□ -1.92
CCNC-208ENST00000519617 KNG1P01042 644 aa3.08□□□□□ -1.92
CCNC-208ENST00000519617 ITGAVP06756 1048 aa3.08□□□□□ -1.92
CCNC-208ENST00000519617 SNRPB2P08579 225 aaKnown RBP3.08□□□□□ -1.92
CCNC-208ENST00000519617 LCP1P13796 627 aa3.08□□□□□ -1.92
CCNC-208ENST00000519617 ECI1P42126 302 aa3.08□□□□□ -1.92
CCNC-208ENST00000519617 SMAD2Q15796 467 aaKnown RBP3.08□□□□□ -1.92
CCNC-208ENST00000519617 DENND5AQ6IQ26 1287 aa3.08□□□□□ -1.92
CCNC-208ENST00000519617 RNF207Q6ZRF8 634 aa3.08□□□□□ -1.92
CCNC-208ENST00000519617 RALYLQ86SE5 291 aaKnown RBP3.08□□□□□ -1.92
CCNC-208ENST00000519617 TRIM48Q8IWZ4 208 aa3.08□□□□□ -1.92
CCNC-208ENST00000519617 AMER2Q8N7J2 671 aa3.08□□□□□ -1.92
CCNC-208ENST00000519617 CPLX3Q8WVH0 158 aa3.08□□□□□ -1.92
CCNC-208ENST00000519617 EDAQ92838 391 aa3.08□□□□□ -1.92
CCNC-208ENST00000519617 PPP1R14AQ96A00 147 aa3.08□□□□□ -1.92
CCNC-208ENST00000519617 SEC16BQ96JE7 1060 aa3.08□□□□□ -1.92
CCNC-208ENST00000519617 GNRHR2Q96P88 292 aa3.08□□□□□ -1.92
CCNC-208ENST00000519617 LMF1Q96S06 567 aa3.08□□□□□ -1.92
CCNC-208ENST00000519617 PDGFDQ9GZP0 370 aaPredicted RBP3.08□□□□□ -1.92
CCNC-208ENST00000519617 CDIP1Q9H305 208 aa3.08□□□□□ -1.92
CCNC-208ENST00000519617 DLL4Q9NR61 685 aa3.08□□□□□ -1.92
CCNC-208ENST00000519617 CLDND1Q9NY35 253 aa3.08□□□□□ -1.92
CCNC-208ENST00000519617 C11orf21Q9P2W6 132 aa3.08□□□□□ -1.92
CCNC-208ENST00000519617 RBPJLQ9UBG7 517 aa3.08□□□□□ -1.92
CCNC-208ENST00000519617 ASH2LQ9UBL3 628 aa3.08□□□□□ -1.92
CCNC-208ENST00000519617 BAZ1BQ9UIG0 1483 aaKnown RBP3.08□□□□□ -1.92
CCNC-208ENST00000519617 PLSCR1O15162 318 aa3.07□□□□□ -1.92
CCNC-208ENST00000519617 CAPNS1P04632 268 aa3.07□□□□□ -1.92
CCNC-208ENST00000519617 CSF2RBP32927 897 aa3.07□□□□□ -1.92
CCNC-208ENST00000519617 SF1Q15637 639 aaKnown RBP3.07□□□□□ -1.92
CCNC-208ENST00000519617 SMN1Q16637 294 aaKnown RBP3.07□□□□□ -1.92
CCNC-208ENST00000519617 VASNQ6EMK4 673 aa3.07□□□□□ -1.92
CCNC-208ENST00000519617 ZNF227Q86WZ6 799 aa3.07□□□□□ -1.92
CCNC-208ENST00000519617 PPIL6Q8IXY8 311 aa3.07□□□□□ -1.92
CCNC-208ENST00000519617 CHFRQ96EP1 664 aa3.07□□□□□ -1.92
CCNC-208ENST00000519617 CHAMP1Q96JM3 812 aa3.07□□□□□ -1.92
CCNC-208ENST00000519617 KATNBL1Q9H079 304 aa3.07□□□□□ -1.92
CCNC-208ENST00000519617 SLC6A20Q9NP91 592 aa3.07□□□□□ -1.92
CCNC-208ENST00000519617 STRIP2Q9ULQ0 834 aa3.07□□□□□ -1.92
CCNC-208ENST00000519617 ZFR2Q9UPR6 939 aaKnown RBP3.07□□□□□ -1.92
CCNC-208ENST00000519617 NPFFR2Q9Y5X5 522 aa3.07□□□□□ -1.92
CCNC-208ENST00000519617 WDR33Q9C0J8 1336 aaKnown RBP3.07□□□□□ -1.92
CCNC-208ENST00000519617 RSF1Q96T23 1441 aaPredicted RBP3.07□□□□□ -1.92
CCNC-208ENST00000519617 NCAPD3P42695 1498 aa3.07□□□□□ -1.92
CCNC-208ENST00000519617 PEG3Q9GZU2 1588 aa3.07□□□□□ -1.92
CCNC-208ENST00000519617 KRIT1O00522 736 aa3.06□□□□□ -1.92
CCNC-208ENST00000519617 NARSO43776 548 aaKnown RBP3.06□□□□□ -1.92
CCNC-208ENST00000519617 VAMP1P23763 118 aa3.06□□□□□ -1.92
CCNC-208ENST00000519617 GFRA1P56159 465 aa3.06□□□□□ -1.92
CCNC-208ENST00000519617 INHBEP58166 350 aa3.06□□□□□ -1.92
CCNC-208ENST00000519617 DPTQ07507 201 aa3.06□□□□□ -1.92
CCNC-208ENST00000519617 ABHD18Q0P651 414 aa3.06□□□□□ -1.92
CCNC-208ENST00000519617 HMGXB3Q12766 1538 aa3.06□□□□□ -1.92
CCNC-208ENST00000519617 PRSS53Q2L4Q9 553 aa3.06□□□□□ -1.92
CCNC-208ENST00000519617 NRN1LQ496H8 165 aa3.06□□□□□ -1.92
CCNC-208ENST00000519617 SLC35F1Q5T1Q4 408 aa3.06□□□□□ -1.92
CCNC-208ENST00000519617 AGBL4Q5VU57 503 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms