RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 LTFP02788 710 aa5.6□□□□□ -1.51
SKP1-205ENST00000519054 PYGMP11217 842 aa5.6□□□□□ -1.51
SKP1-205ENST00000519054 TUSC3Q13454 348 aa5.6□□□□□ -1.51
SKP1-205ENST00000519054 SQSTM1Q13501 440 aa5.6□□□□□ -1.51
SKP1-205ENST00000519054 HABP4Q5JVS0 413 aaKnown RBP5.6□□□□□ -1.51
SKP1-205ENST00000519054 TEPPQ6URK8 271 aa5.6□□□□□ -1.51
SKP1-205ENST00000519054 SAPCD2Q86UD0 394 aa5.6□□□□□ -1.51
SKP1-205ENST00000519054 ZC3H7AQ8IWR0 971 aaKnown RBP5.6□□□□□ -1.51
SKP1-205ENST00000519054 TRIM48Q8IWZ4 208 aa5.6□□□□□ -1.51
SKP1-205ENST00000519054 TP53I13Q8NBR0 393 aaPredicted RBP5.6□□□□□ -1.51
SKP1-205ENST00000519054 CLEC4DQ8WXI8 215 aa5.6□□□□□ -1.51
SKP1-205ENST00000519054 C11orf84Q9BUA3 381 aaPredicted RBP5.6□□□□□ -1.51
SKP1-205ENST00000519054 CATSPERZQ9NTU4 200 aa5.6□□□□□ -1.51
SKP1-205ENST00000519054 USP35Q9P2H5 1018 aa5.6□□□□□ -1.51
SKP1-205ENST00000519054 EFCAB14O75071 495 aa5.59□□□□□ -1.51
SKP1-205ENST00000519054 LRG1P02750 347 aa5.59□□□□□ -1.51
SKP1-205ENST00000519054 NAT1P18440 290 aa5.59□□□□□ -1.51
SKP1-205ENST00000519054 DNM2P50570 870 aa5.59□□□□□ -1.51
SKP1-205ENST00000519054 ITGA1P56199 1179 aa5.59□□□□□ -1.51
SKP1-205ENST00000519054 ST5P78524 1137 aa5.59□□□□□ -1.51
SKP1-205ENST00000519054 DLX2Q07687 328 aaPredicted RBP5.59□□□□□ -1.51
SKP1-205ENST00000519054 FBLN7Q53RD9 439 aa5.59□□□□□ -1.51
SKP1-205ENST00000519054 TRIM61Q5EBN2 209 aa5.59□□□□□ -1.51
SKP1-205ENST00000519054 BRAPQ7Z569 592 aa5.59□□□□□ -1.51
SKP1-205ENST00000519054 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.59□□□□□ -1.51
SKP1-205ENST00000519054 LINC00482Q8N8I6 264 aa5.59□□□□□ -1.51
SKP1-205ENST00000519054 MARCH10Q8NA82 808 aaPredicted RBP5.59□□□□□ -1.51
SKP1-205ENST00000519054 GSTCDQ8NEC7 633 aa5.59□□□□□ -1.51
SKP1-205ENST00000519054 FBXW5Q969U6 566 aa5.59□□□□□ -1.51
SKP1-205ENST00000519054 MAGEB10Q96LZ2 347 aaPredicted RBP5.59□□□□□ -1.51
SKP1-205ENST00000519054 MRPL4Q9BYD3 311 aaKnown RBP5.59□□□□□ -1.51
SKP1-205ENST00000519054 KRTAP9-9Q9BYP9 154 aa5.59□□□□□ -1.51
SKP1-205ENST00000519054 KRTAP9-4Q9BYQ2 154 aa5.59□□□□□ -1.51
SKP1-205ENST00000519054 CD244Q9BZW8 370 aa5.59□□□□□ -1.51
SKP1-205ENST00000519054 ZCCHC4Q9H5U6 513 aa5.59□□□□□ -1.51
SKP1-205ENST00000519054 NCOA5Q9HCD5 579 aaKnown RBP5.59□□□□□ -1.51
SKP1-205ENST00000519054 PCDH18Q9HCL0 1135 aa5.59□□□□□ -1.51
SKP1-205ENST00000519054 NGRNQ9NPE2 291 aaKnown RBP5.59□□□□□ -1.51
SKP1-205ENST00000519054 SPATA6Q9NWH7 488 aaPredicted RBP5.59□□□□□ -1.51
SKP1-205ENST00000519054 CBLCQ9ULV8 474 aa5.59□□□□□ -1.51
SKP1-205ENST00000519054 TELO2Q9Y4R8 837 aa5.59□□□□□ -1.51
SKP1-205ENST00000519054 NUB1Q9Y5A7 615 aa5.59□□□□□ -1.51
SKP1-205ENST00000519054 TCRBV5S4A2TA0A5A2 114 aa5.58□□□□□ -1.52
SKP1-205ENST00000519054 CCDC66A2RUB6 948 aa5.58□□□□□ -1.52
SKP1-205ENST00000519054 WNT9AO14904 365 aa5.58□□□□□ -1.52
SKP1-205ENST00000519054 SMARCA5O60264 1052 aaPredicted RBP5.58□□□□□ -1.52
SKP1-205ENST00000519054 RAPGEF3O95398 923 aa5.58□□□□□ -1.52
SKP1-205ENST00000519054 INHBBP09529 407 aa5.58□□□□□ -1.52
SKP1-205ENST00000519054 PDE6AP16499 860 aa5.58□□□□□ -1.52
SKP1-205ENST00000519054 KRT15P19012 456 aa5.58□□□□□ -1.52
SKP1-205ENST00000519054 CAP1Q01518 475 aa5.58□□□□□ -1.52
SKP1-205ENST00000519054 TMC5Q6UXY8 1006 aa5.58□□□□□ -1.52
SKP1-205ENST00000519054 LIPIQ6XZB0 460 aa5.58□□□□□ -1.52
SKP1-205ENST00000519054 ARHGAP36Q6ZRI8 547 aa5.58□□□□□ -1.52
SKP1-205ENST00000519054 KCTD1Q719H9 257 aa5.58□□□□□ -1.52
SKP1-205ENST00000519054 FGD2Q7Z6J4 655 aa5.58□□□□□ -1.52
SKP1-205ENST00000519054 KYQ8NBH2 561 aa5.58□□□□□ -1.52
SKP1-205ENST00000519054 SYT8Q8NBV8 401 aa5.58□□□□□ -1.52
SKP1-205ENST00000519054 SH3RF2Q8TEC5 729 aa5.58□□□□□ -1.52
SKP1-205ENST00000519054 SCLYQ96I15 445 aa5.58□□□□□ -1.52
SKP1-205ENST00000519054 ZSWIM3Q96MP5 696 aa5.58□□□□□ -1.52
SKP1-205ENST00000519054 RBPJLQ9UBG7 517 aa5.58□□□□□ -1.52
SKP1-205ENST00000519054 ESYT3A0FGR9 886 aa5.57□□□□□ -1.52
SKP1-205ENST00000519054 SH3D21A4FU49 640 aa5.57□□□□□ -1.52
SKP1-205ENST00000519054 APPP05067 770 aa5.57□□□□□ -1.52
SKP1-205ENST00000519054 THBS2P35442 1172 aa5.57□□□□□ -1.52
SKP1-205ENST00000519054 SLURP1P55000 103 aa5.57□□□□□ -1.52
SKP1-205ENST00000519054 GPR19Q15760 415 aa5.57□□□□□ -1.52
SKP1-205ENST00000519054 CRY1Q16526 586 aa5.57□□□□□ -1.52
SKP1-205ENST00000519054 PAN2Q504Q3 1202 aaKnown RBP5.57□□□□□ -1.52
SKP1-205ENST00000519054 FAM47CQ5HY64 1035 aa5.57□□□□□ -1.52
SKP1-205ENST00000519054 TTLL7Q6ZT98 887 aa5.57□□□□□ -1.52
SKP1-205ENST00000519054 C16orf59Q7L2K0 433 aa5.57□□□□□ -1.52
SKP1-205ENST00000519054 OSTM1Q86WC4 334 aa5.57□□□□□ -1.52
SKP1-205ENST00000519054 PTRH1Q86Y79 214 aaKnown RBP5.57□□□□□ -1.52
SKP1-205ENST00000519054 CISD2Q8N5K1 135 aaKnown RBP5.57□□□□□ -1.52
SKP1-205ENST00000519054 TTLL11Q8NHH1 800 aa5.57□□□□□ -1.52
SKP1-205ENST00000519054 KCNC2Q96PR1 638 aa5.57□□□□□ -1.52
SKP1-205ENST00000519054 SPATA25Q9BR10 227 aa5.57□□□□□ -1.52
SKP1-205ENST00000519054 PARD6AQ9NPB6 346 aa5.57□□□□□ -1.52
SKP1-205ENST00000519054 NTMQ9P121 344 aa5.57□□□□□ -1.52
SKP1-205ENST00000519054 WASF3Q9UPY6 502 aa5.57□□□□□ -1.52
SKP1-205ENST00000519054 COQ6Q9Y2Z9 468 aa5.57□□□□□ -1.52
SKP1-205ENST00000519054 ARID1BQ8NFD5 2236 aaPredicted RBP5.57□□□□□ -1.52
SKP1-205ENST00000519054 KCNK3O14649 394 aa5.56□□□□□ -1.52
SKP1-205ENST00000519054 PLD2O14939 933 aa5.56□□□□□ -1.52
SKP1-205ENST00000519054 PPP1R12AO14974 1030 aaPredicted RBP5.56□□□□□ -1.52
SKP1-205ENST00000519054 GSTA4O15217 222 aa5.56□□□□□ -1.52
SKP1-205ENST00000519054 AMY2AP04746 511 aa5.56□□□□□ -1.52
SKP1-205ENST00000519054 FAHP16930 419 aa5.56□□□□□ -1.52
SKP1-205ENST00000519054 AMY2BP19961 511 aa5.56□□□□□ -1.52
SKP1-205ENST00000519054 EPHA5P54756 1037 aa5.56□□□□□ -1.52
SKP1-205ENST00000519054 JAM2P57087 298 aa5.56□□□□□ -1.52
SKP1-205ENST00000519054 ADAM9Q13443 819 aa5.56□□□□□ -1.52
SKP1-205ENST00000519054 EP400NLQ6ZTU2 488 aa5.56□□□□□ -1.52
SKP1-205ENST00000519054 SP8Q8IXZ3 490 aa5.56□□□□□ -1.52
SKP1-205ENST00000519054 CARFQ8N187 725 aa5.56□□□□□ -1.52
SKP1-205ENST00000519054 TTLL6Q8N841 843 aa5.56□□□□□ -1.52
SKP1-205ENST00000519054 FEZF2Q8TBJ5 459 aa5.56□□□□□ -1.52
SKP1-205ENST00000519054 RNPC3Q96LT9 517 aaKnown RBP5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms