RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 FXR1P51114 621 aaKnown RBP eCLIP21.31■■□□□ 1
FAM49B-208ENST00000518344 ARHGAP4P98171 946 aa21.31■■□□□ 1
FAM49B-208ENST00000518344 ME3Q16798 604 aa21.31■■□□□ 1
FAM49B-208ENST00000518344 KIAA0753Q2KHM9 967 aa21.31■■□□□ 1
FAM49B-208ENST00000518344 MCTP2Q6DN12 878 aa21.31■■□□□ 1
FAM49B-208ENST00000518344 MFSD5Q6N075 450 aa21.31■■□□□ 1
FAM49B-208ENST00000518344 C7orf31Q8N865 590 aa21.31■■□□□ 1
FAM49B-208ENST00000518344 RASGRP4Q8TDF6 673 aa21.31■■□□□ 1
FAM49B-208ENST00000518344 SH3GLB2Q9NR46 395 aa21.31■■□□□ 1
FAM49B-208ENST00000518344 NOD1Q9Y239 953 aa21.31■■□□□ 1
FAM49B-208ENST00000518344 TELO2Q9Y4R8 837 aa21.31■■□□□ 1
FAM49B-208ENST00000518344 HOXD8P13378 290 aaPredicted RBP21.3■■□□□ 1
FAM49B-208ENST00000518344 KCNA2P16389 499 aa21.3■■□□□ 1
FAM49B-208ENST00000518344 CEP55Q53EZ4 464 aa21.3■■□□□ 1
FAM49B-208ENST00000518344 UTP14CQ5TAP6 766 aaKnown RBP21.3■■□□□ 1
FAM49B-208ENST00000518344 TMEM199Q8N511 208 aa21.3■■□□□ 1
FAM49B-208ENST00000518344 AIFM3Q96NN9 605 aa21.3■■□□□ 1
FAM49B-208ENST00000518344 GPR20Q99678 358 aa21.3■■□□□ 1
FAM49B-208ENST00000518344 C22orf23Q9BZE7 217 aa21.3■■□□□ 1
FAM49B-208ENST00000518344 KCNH7Q9NS40 1196 aa21.3■■□□□ 1
FAM49B-208ENST00000518344 LARGE1O95461 756 aa21.29■■□□□ 1
FAM49B-208ENST00000518344 F2P00734 622 aa21.29■■□□□ 1
FAM49B-208ENST00000518344 LGALS2P05162 132 aa21.29■■□□□ 1
FAM49B-208ENST00000518344 ARP10275 920 aa21.29■■□□□ 1
FAM49B-208ENST00000518344 EPHB4P54760 987 aa21.29■■□□□ 1
FAM49B-208ENST00000518344 SHHQ15465 462 aa21.29■■□□□ 1
FAM49B-208ENST00000518344 PTGISQ16647 500 aa21.29■■□□□ 1
FAM49B-208ENST00000518344 C16orf70Q9BSU1 422 aa21.29■■□□□ 1
FAM49B-208ENST00000518344 NOC4LQ9BVI4 516 aaKnown RBP21.29■■□□□ 1
FAM49B-208ENST00000518344 HDAC6Q9UBN7 1215 aa21.29■■□□□ 1
FAM49B-208ENST00000518344 UMODL1Q5DID0 1318 aa21.29■■□□□ 1
FAM49B-208ENST00000518344 HAS3O00219 553 aa21.28■■□□□ 1
FAM49B-208ENST00000518344 CSF2RAP15509 400 aa21.28■■□□□ 1
FAM49B-208ENST00000518344 CCL23P55773 120 aa21.28■■□□□ 1
FAM49B-208ENST00000518344 C9orf50Q5SZB4 431 aa21.28■■□□□ 1
FAM49B-208ENST00000518344 GDF6Q6KF10 455 aaPredicted RBP21.28■■□□□ 1
FAM49B-208ENST00000518344 PCDHA4Q9UN74 947 aa21.28■■□□□ 1
FAM49B-208ENST00000518344 H3BRB1 525 aa21.27■■□□□ 1
FAM49B-208ENST00000518344 MEIS1O00470 390 aa21.27■■□□□ 1
FAM49B-208ENST00000518344 CTDNEP1O95476 244 aa21.27■■□□□ 1
FAM49B-208ENST00000518344 CYP3A4P08684 503 aa21.27■■□□□ 1
FAM49B-208ENST00000518344 PPIGQ13427 754 aaKnown RBP eCLIP21.27■■□□□ 1
FAM49B-208ENST00000518344 SESTD1Q86VW0 696 aa21.27■■□□□ 1
FAM49B-208ENST00000518344 GTF3C6Q969F1 213 aa21.27■■□□□ 1
FAM49B-208ENST00000518344 TUT1Q9H6E5 874 aaKnown RBP21.27■■□□□ 1
FAM49B-208ENST00000518344 AGO4Q9HCK5 861 aaKnown RBP21.27■■□□□ 1
FAM49B-208ENST00000518344 GTF2IRD1Q9UHL9 959 aa21.27■■□□□ 1
FAM49B-208ENST00000518344 FAM86B1E9PN63 330 aa21.26■□□□□ 0.99
FAM49B-208ENST00000518344 SOX1O00570 391 aaPredicted RBP21.26■□□□□ 0.99
FAM49B-208ENST00000518344 FAM86B2P0C5J1 330 aa21.26■□□□□ 0.99
FAM49B-208ENST00000518344 TCF7P36402 384 aaPredicted RBP21.26■□□□□ 0.99
FAM49B-208ENST00000518344 PLA2G4DQ86XP0 818 aa21.26■□□□□ 0.99
FAM49B-208ENST00000518344 SEPT1Q8WYJ6 367 aa21.26■□□□□ 0.99
FAM49B-208ENST00000518344 UIMC1Q96RL1 719 aa21.26■□□□□ 0.99
FAM49B-208ENST00000518344 SDF4Q9BRK5 362 aa21.26■□□□□ 0.99
FAM49B-208ENST00000518344 ORC3Q9UBD5 711 aaPredicted RBP21.26■□□□□ 0.99
FAM49B-208ENST00000518344 KCNJ14Q9UNX9 436 aa21.26■□□□□ 0.99
FAM49B-208ENST00000518344 LTBP2Q14767 1821 aa21.26■□□□□ 0.99
FAM49B-208ENST00000518344 STK36Q9NRP7 1315 aa21.26■□□□□ 0.99
FAM49B-208ENST00000518344 ACRP10323 421 aa21.25■□□□□ 0.99
FAM49B-208ENST00000518344 XBP1P17861 261 aa21.25■□□□□ 0.99
FAM49B-208ENST00000518344 RANBP2P49792 3224 aaKnown RBP21.25■□□□□ 0.99
FAM49B-208ENST00000518344 LRIT3Q3SXY7 679 aa21.25■□□□□ 0.99
FAM49B-208ENST00000518344 NIPA1Q7RTP0 329 aa21.25■□□□□ 0.99
FAM49B-208ENST00000518344 TRIM50Q86XT4 487 aa21.25■□□□□ 0.99
FAM49B-208ENST00000518344 BLIDQ8IZY5 108 aa21.25■□□□□ 0.99
FAM49B-208ENST00000518344 RETREG2Q8NC44 543 aa21.25■□□□□ 0.99
FAM49B-208ENST00000518344 CRYGNQ8WXF5 182 aa21.25■□□□□ 0.99
FAM49B-208ENST00000518344 SCLYQ96I15 445 aa21.25■□□□□ 0.99
FAM49B-208ENST00000518344 KIF2CQ99661 725 aa21.25■□□□□ 0.99
FAM49B-208ENST00000518344 UPF2Q9HAU5 1272 aaKnown RBP21.25■□□□□ 0.99
FAM49B-208ENST00000518344 JPH1Q9HDC5 661 aaPredicted RBP21.25■□□□□ 0.99
FAM49B-208ENST00000518344 SLC9A2Q9UBY0 812 aa21.25■□□□□ 0.99
FAM49B-208ENST00000518344 LIMCH1Q9UPQ0 1083 aa21.25■□□□□ 0.99
FAM49B-208ENST00000518344 GSTTP1A0A1W2PQM5 241 aa21.24■□□□□ 0.99
FAM49B-208ENST00000518344 ZNF200P98182 395 aaPredicted RBP21.24■□□□□ 0.99
FAM49B-208ENST00000518344 GALNT17Q6IS24 598 aa21.24■□□□□ 0.99
FAM49B-208ENST00000518344 WASF1Q92558 559 aa21.24■□□□□ 0.99
FAM49B-208ENST00000518344 LRCH3Q96II8 777 aa21.24■□□□□ 0.99
FAM49B-208ENST00000518344 WNT8AQ9H1J5 351 aa21.24■□□□□ 0.99
FAM49B-208ENST00000518344 ZNF215Q9UL58 517 aaPredicted RBP21.24■□□□□ 0.99
FAM49B-208ENST00000518344 SCN10AQ9Y5Y9 1956 aa21.24■□□□□ 0.99
FAM49B-208ENST00000518344 MYH7BA7E2Y1 1941 aa21.23■□□□□ 0.99
FAM49B-208ENST00000518344 IGLV3-22A0A075B6J6 115 aa21.23■□□□□ 0.99
FAM49B-208ENST00000518344 DDX39AO00148 427 aaKnown RBP21.23■□□□□ 0.99
FAM49B-208ENST00000518344 SMIM10L2AP0DMW4 78 aa21.23■□□□□ 0.99
FAM49B-208ENST00000518344 SMIM10L2BP0DMW5 78 aa21.23■□□□□ 0.99
FAM49B-208ENST00000518344 RBM25P49756 843 aaKnown RBP21.23■□□□□ 0.99
FAM49B-208ENST00000518344 ITGB3BPQ13352 177 aaPredicted RBP21.23■□□□□ 0.99
FAM49B-208ENST00000518344 BFSP2Q13515 415 aa21.23■□□□□ 0.99
FAM49B-208ENST00000518344 PRR16Q569H4 304 aa21.23■□□□□ 0.99
FAM49B-208ENST00000518344 C16orf59Q7L2K0 433 aa21.23■□□□□ 0.99
FAM49B-208ENST00000518344 GLG1Q92896 1179 aa21.23■□□□□ 0.99
FAM49B-208ENST00000518344 RNPC3Q96LT9 517 aaKnown RBP21.23■□□□□ 0.99
FAM49B-208ENST00000518344 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.23■□□□□ 0.99
FAM49B-208ENST00000518344 IL23AQ9NPF7 189 aa21.23■□□□□ 0.99
FAM49B-208ENST00000518344 GJB4Q9NTQ9 266 aa21.23■□□□□ 0.99
FAM49B-208ENST00000518344 NFASCO94856 1347 aa21.23■□□□□ 0.99
FAM49B-208ENST00000518344 C17orf102A2RUQ5 167 aa21.22■□□□□ 0.99
FAM49B-208ENST00000518344 FDPSP14324 419 aaKnown RBP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms