RNA–Protein interactions for RNA: ENST00000518060.5

SPIDR-205, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SPIDR, Length 482 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-205ENST00000518060 KCNJ6P48051 423 aa12.12□□□□□ -0.47
SPIDR-205ENST00000518060 SEMA3FQ13275 785 aa12.12□□□□□ -0.47
SPIDR-205ENST00000518060 PTK7Q13308 1070 aa12.12□□□□□ -0.47
SPIDR-205ENST00000518060 PPP1R18Q6NYC8 613 aa12.12□□□□□ -0.47
SPIDR-205ENST00000518060 TRIM50Q86XT4 487 aa12.12□□□□□ -0.47
SPIDR-205ENST00000518060 DHX38Q92620 1227 aaKnown RBP12.12□□□□□ -0.47
SPIDR-205ENST00000518060 ATP6V0A1Q93050 837 aa12.12□□□□□ -0.47
SPIDR-205ENST00000518060 CDHR1Q96JP9 859 aa12.12□□□□□ -0.47
SPIDR-205ENST00000518060 GPR20Q99678 358 aa12.12□□□□□ -0.47
SPIDR-205ENST00000518060 TUT1Q9H6E5 874 aaKnown RBP12.12□□□□□ -0.47
SPIDR-205ENST00000518060 KIAA1217Q5T5P2 1943 aa12.11□□□□□ -0.47
SPIDR-205ENST00000518060 STXBP3O00186 592 aa12.11□□□□□ -0.47
SPIDR-205ENST00000518060 HAS3O00219 553 aa12.11□□□□□ -0.47
SPIDR-205ENST00000518060 SMIM10L2AP0DMW4 78 aa12.11□□□□□ -0.47
SPIDR-205ENST00000518060 SMIM10L2BP0DMW5 78 aa12.11□□□□□ -0.47
SPIDR-205ENST00000518060 CKBP12277 381 aa12.11□□□□□ -0.47
SPIDR-205ENST00000518060 HOXD8P13378 290 aaPredicted RBP12.11□□□□□ -0.47
SPIDR-205ENST00000518060 MYOGP15173 224 aa12.11□□□□□ -0.47
SPIDR-205ENST00000518060 CDC27P30260 824 aa12.11□□□□□ -0.47
SPIDR-205ENST00000518060 AKAP17AQ02040 695 aaKnown RBP12.11□□□□□ -0.47
SPIDR-205ENST00000518060 PPP2R2DQ66LE6 453 aa12.11□□□□□ -0.47
SPIDR-205ENST00000518060 GIMAP8Q8ND71 665 aaPredicted RBP12.11□□□□□ -0.47
SPIDR-205ENST00000518060 GPRASP2Q96D09 838 aa12.11□□□□□ -0.47
SPIDR-205ENST00000518060 GAS2L1Q99501 681 aaPredicted RBP12.11□□□□□ -0.47
SPIDR-205ENST00000518060 C16orf70Q9BSU1 422 aa12.11□□□□□ -0.47
SPIDR-205ENST00000518060 USP26Q9BXU7 913 aa12.11□□□□□ -0.47
SPIDR-205ENST00000518060 PRDM12Q9H4Q4 367 aa12.11□□□□□ -0.47
SPIDR-205ENST00000518060 YBX2Q9Y2T7 364 aaKnown RBP12.11□□□□□ -0.47
SPIDR-205ENST00000518060 SMCO2A6NFE2 343 aa12.1□□□□□ -0.47
SPIDR-205ENST00000518060 hCG_1984214I3L0E3 225 aa12.1□□□□□ -0.47
SPIDR-205ENST00000518060 PPFIA3O75145 1194 aa12.1□□□□□ -0.47
SPIDR-205ENST00000518060 CTSHP09668 335 aa12.1□□□□□ -0.47
SPIDR-205ENST00000518060 ITGB5P18084 799 aa12.1□□□□□ -0.47
SPIDR-205ENST00000518060 IGFBP4P22692 258 aa12.1□□□□□ -0.47
SPIDR-205ENST00000518060 RPS6KB1P23443 525 aa12.1□□□□□ -0.47
SPIDR-205ENST00000518060 MARK3P27448 753 aa12.1□□□□□ -0.47
SPIDR-205ENST00000518060 ADD1P35611 737 aaKnown RBP12.1□□□□□ -0.47
SPIDR-205ENST00000518060 ZNF76P36508 570 aa12.1□□□□□ -0.47
SPIDR-205ENST00000518060 RCAN1P53805 252 aa12.1□□□□□ -0.47
SPIDR-205ENST00000518060 TYW1BQ6NUM6 668 aa12.1□□□□□ -0.47
SPIDR-205ENST00000518060 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.1□□□□□ -0.47
SPIDR-205ENST00000518060 ZNF713Q8N859 430 aaPredicted RBP12.1□□□□□ -0.47
SPIDR-205ENST00000518060 PPM1EQ8WY54 764 aa12.1□□□□□ -0.47
SPIDR-205ENST00000518060 GLG1Q92896 1179 aa12.1□□□□□ -0.47
SPIDR-205ENST00000518060 WNT8BQ93098 351 aa12.1□□□□□ -0.47
SPIDR-205ENST00000518060 VWCEQ96DN2 955 aa12.1□□□□□ -0.47
SPIDR-205ENST00000518060 CTAGE1Q96RT6 745 aa12.1□□□□□ -0.47
SPIDR-205ENST00000518060 SLC9A7Q96T83 725 aa12.1□□□□□ -0.47
SPIDR-205ENST00000518060 ANO3Q9BYT9 981 aa12.1□□□□□ -0.47
SPIDR-205ENST00000518060 RIC8AQ9NPQ8 531 aa12.1□□□□□ -0.47
SPIDR-205ENST00000518060 TMEM260Q9NX78 707 aa12.1□□□□□ -0.47
SPIDR-205ENST00000518060 BARHL2Q9NY43 387 aa12.1□□□□□ -0.47
SPIDR-205ENST00000518060 TELO2Q9Y4R8 837 aa12.1□□□□□ -0.47
SPIDR-205ENST00000518060 ATP9AO75110 1047 aa12.09□□□□□ -0.47
SPIDR-205ENST00000518060 BAIAP3O94812 1187 aa12.09□□□□□ -0.47
SPIDR-205ENST00000518060 GNAT1P11488 350 aa12.09□□□□□ -0.47
SPIDR-205ENST00000518060 KCNA2P16389 499 aa12.09□□□□□ -0.47
SPIDR-205ENST00000518060 TCF7P36402 384 aaPredicted RBP12.09□□□□□ -0.47
SPIDR-205ENST00000518060 ARHGAP4P98171 946 aa12.09□□□□□ -0.47
SPIDR-205ENST00000518060 FUT2Q10981 343 aa12.09□□□□□ -0.47
SPIDR-205ENST00000518060 HIC1Q14526 733 aa12.09□□□□□ -0.47
SPIDR-205ENST00000518060 ZNF618Q5T7W0 954 aa12.09□□□□□ -0.47
SPIDR-205ENST00000518060 JAKMIP3Q5VZ66 844 aa12.09□□□□□ -0.47
SPIDR-205ENST00000518060 KCNB2Q92953 911 aa12.09□□□□□ -0.47
SPIDR-205ENST00000518060 SENP7Q9BQF6 1050 aa12.09□□□□□ -0.47
SPIDR-205ENST00000518060 SDF4Q9BRK5 362 aa12.09□□□□□ -0.47
SPIDR-205ENST00000518060 ZBED2Q9BTP6 218 aa12.09□□□□□ -0.47
SPIDR-205ENST00000518060 GLT8D2Q9H1C3 349 aa12.09□□□□□ -0.47
SPIDR-205ENST00000518060 JPH1Q9HDC5 661 aaPredicted RBP12.09□□□□□ -0.47
SPIDR-205ENST00000518060 JADE2Q9NQC1 790 aa12.09□□□□□ -0.47
SPIDR-205ENST00000518060 SETD4Q9NVD3 440 aa12.09□□□□□ -0.47
SPIDR-205ENST00000518060 PCDHA11Q9Y5I1 949 aa12.09□□□□□ -0.47
SPIDR-205ENST00000518060 UBIAD1Q9Y5Z9 338 aa12.09□□□□□ -0.47
SPIDR-205ENST00000518060 TANC1Q9C0D5 1861 aa12.08□□□□□ -0.48
SPIDR-205ENST00000518060 RSPH10B2B2RC85 870 aa12.08□□□□□ -0.48
SPIDR-205ENST00000518060 KIF28PB7ZC32 967 aa12.08□□□□□ -0.48
SPIDR-205ENST00000518060 RBAK-RBAKDNI3L0D1 243 aa12.08□□□□□ -0.48
SPIDR-205ENST00000518060 DLL1O00548 723 aa12.08□□□□□ -0.48
SPIDR-205ENST00000518060 TREHO43280 583 aa12.08□□□□□ -0.48
SPIDR-205ENST00000518060 NBNO60934 754 aa12.08□□□□□ -0.48
SPIDR-205ENST00000518060 PARNO95453 639 aaKnown RBP12.08□□□□□ -0.48
SPIDR-205ENST00000518060 FOSP01100 380 aaPredicted RBP12.08□□□□□ -0.48
SPIDR-205ENST00000518060 CA3P07451 260 aa12.08□□□□□ -0.48
SPIDR-205ENST00000518060 RSPH10BP0C881 870 aa12.08□□□□□ -0.48
SPIDR-205ENST00000518060 SCG2P13521 617 aa12.08□□□□□ -0.48
SPIDR-205ENST00000518060 CCT2P78371 535 aaKnown RBP12.08□□□□□ -0.48
SPIDR-205ENST00000518060 AP3B2Q13367 1082 aa12.08□□□□□ -0.48
SPIDR-205ENST00000518060 PFKFB3Q16875 520 aaPredicted RBP12.08□□□□□ -0.48
SPIDR-205ENST00000518060 FAM117BQ6P1L5 589 aa12.08□□□□□ -0.48
SPIDR-205ENST00000518060 CNKSR3Q6P9H4 555 aa12.08□□□□□ -0.48
SPIDR-205ENST00000518060 SERINC5Q86VE9 423 aa12.08□□□□□ -0.48
SPIDR-205ENST00000518060 HERC6Q8IVU3 1022 aa12.08□□□□□ -0.48
SPIDR-205ENST00000518060 MICALL1Q8N3F8 863 aa12.08□□□□□ -0.48
SPIDR-205ENST00000518060 CCDC12Q8WUD4 166 aaPredicted RBP12.08□□□□□ -0.48
SPIDR-205ENST00000518060 SEPT1Q8WYJ6 367 aa12.08□□□□□ -0.48
SPIDR-205ENST00000518060 PHKBQ93100 1093 aa12.08□□□□□ -0.48
SPIDR-205ENST00000518060 SLC26A6Q9BXS9 759 aa12.08□□□□□ -0.48
SPIDR-205ENST00000518060 CERS4Q9HA82 394 aa12.08□□□□□ -0.48
SPIDR-205ENST00000518060 FAM217BQ9NTX9 383 aaPredicted RBP12.08□□□□□ -0.48
SPIDR-205ENST00000518060 PPP4R2Q9NY27 417 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms