RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 TECTAO75443 2155 aa13.24□□□□□ -0.29
CTNNA1-205ENST00000517904 C17orf102A2RUQ5 167 aa13.23□□□□□ -0.29
CTNNA1-205ENST00000517904 TREHO43280 583 aa13.23□□□□□ -0.29
CTNNA1-205ENST00000517904 PPP1R11O60927 126 aaPredicted RBP13.23□□□□□ -0.29
CTNNA1-205ENST00000517904 KDM4AO75164 1064 aa13.23□□□□□ -0.29
CTNNA1-205ENST00000517904 CTSHP09668 335 aa13.23□□□□□ -0.29
CTNNA1-205ENST00000517904 LINC00271P0C7V0 271 aa13.23□□□□□ -0.29
CTNNA1-205ENST00000517904 MYCLP12524 364 aaPredicted RBP13.23□□□□□ -0.29
CTNNA1-205ENST00000517904 UBA1P22314 1058 aaKnown RBP13.23□□□□□ -0.29
CTNNA1-205ENST00000517904 PDE1AP54750 535 aa13.23□□□□□ -0.29
CTNNA1-205ENST00000517904 ASPRV1Q53RT3 343 aa13.23□□□□□ -0.29
CTNNA1-205ENST00000517904 SEPT8Q92599 483 aa13.23□□□□□ -0.29
CTNNA1-205ENST00000517904 ATP6V0A1Q93050 837 aa13.23□□□□□ -0.29
CTNNA1-205ENST00000517904 ZFP91Q96JP5 570 aaPredicted RBP13.23□□□□□ -0.29
CTNNA1-205ENST00000517904 KCNH6Q9H252 994 aa13.23□□□□□ -0.29
CTNNA1-205ENST00000517904 RNF41Q9H4P4 317 aaPredicted RBP13.23□□□□□ -0.29
CTNNA1-205ENST00000517904 BCAS3Q9H6U6 928 aa13.23□□□□□ -0.29
CTNNA1-205ENST00000517904 KAT14Q9H8E8 782 aa13.23□□□□□ -0.29
CTNNA1-205ENST00000517904 H3BRB1 525 aa13.22□□□□□ -0.29
CTNNA1-205ENST00000517904 DHX16O60231 1041 aaKnown RBP13.22□□□□□ -0.29
CTNNA1-205ENST00000517904 SMIM10L2AP0DMW4 78 aa13.22□□□□□ -0.29
CTNNA1-205ENST00000517904 SMIM10L2BP0DMW5 78 aa13.22□□□□□ -0.29
CTNNA1-205ENST00000517904 HOXA13P31271 388 aaPredicted RBP13.22□□□□□ -0.29
CTNNA1-205ENST00000517904 DLX2Q07687 328 aaPredicted RBP13.22□□□□□ -0.29
CTNNA1-205ENST00000517904 PGM5Q15124 567 aa13.22□□□□□ -0.29
CTNNA1-205ENST00000517904 CTC1Q2NKJ3 1217 aa13.22□□□□□ -0.29
CTNNA1-205ENST00000517904 ANKRD45Q5TZF3 282 aa13.22□□□□□ -0.29
CTNNA1-205ENST00000517904 KCNV1Q6PIU1 500 aa13.22□□□□□ -0.29
CTNNA1-205ENST00000517904 STOX1Q6ZVD7 989 aa13.22□□□□□ -0.29
CTNNA1-205ENST00000517904 RPAINQ86UA6 219 aa13.22□□□□□ -0.29
CTNNA1-205ENST00000517904 VSIG10LQ86VR7 867 aa13.22□□□□□ -0.29
CTNNA1-205ENST00000517904 ENAHQ8N8S7 591 aaPredicted RBP13.22□□□□□ -0.29
CTNNA1-205ENST00000517904 IFIH1Q9BYX4 1025 aaKnown RBP13.22□□□□□ -0.29
CTNNA1-205ENST00000517904 RNPEPQ9H4A4 650 aa13.22□□□□□ -0.29
CTNNA1-205ENST00000517904 TUT1Q9H6E5 874 aaKnown RBP13.22□□□□□ -0.29
CTNNA1-205ENST00000517904 FAM50BQ9Y247 325 aa13.22□□□□□ -0.29
CTNNA1-205ENST00000517904 LGALS2P05162 132 aa13.21□□□□□ -0.29
CTNNA1-205ENST00000517904 PARP1P09874 1014 aaKnown RBP13.21□□□□□ -0.29
CTNNA1-205ENST00000517904 HYAL1Q12794 435 aa13.21□□□□□ -0.29
CTNNA1-205ENST00000517904 SMAD2Q15796 467 aaKnown RBP13.21□□□□□ -0.29
CTNNA1-205ENST00000517904 CLUL1Q15846 466 aa13.21□□□□□ -0.29
CTNNA1-205ENST00000517904 IQCA1Q86XH1 822 aa13.21□□□□□ -0.29
CTNNA1-205ENST00000517904 STAG2Q8N3U4 1231 aa13.21□□□□□ -0.29
CTNNA1-205ENST00000517904 ZSCAN10Q96SZ4 725 aaPredicted RBP13.21□□□□□ -0.29
CTNNA1-205ENST00000517904 AMNQ9BXJ7 453 aa13.21□□□□□ -0.29
CTNNA1-205ENST00000517904 MUTYHQ9UIF7 546 aa13.21□□□□□ -0.29
CTNNA1-205ENST00000517904 DOCK5Q9H7D0 1870 aa13.21□□□□□ -0.3
CTNNA1-205ENST00000517904 B4E1Z4 1266 aa13.2□□□□□ -0.3
CTNNA1-205ENST00000517904 C5orf67F2Z3F1 127 aa13.2□□□□□ -0.3
CTNNA1-205ENST00000517904 ZNF213O14771 459 aa13.2□□□□□ -0.3
CTNNA1-205ENST00000517904 GRM6O15303 877 aa13.2□□□□□ -0.3
CTNNA1-205ENST00000517904 CAND2O75155 1236 aa13.2□□□□□ -0.3
CTNNA1-205ENST00000517904 CTNNB1P35222 781 aa13.2□□□□□ -0.3
CTNNA1-205ENST00000517904 GTF2F1P35269 517 aaKnown RBP eCLIP13.2□□□□□ -0.3
CTNNA1-205ENST00000517904 CCDC178Q5BJE1 867 aa13.2□□□□□ -0.3
CTNNA1-205ENST00000517904 TICAM2Q86XR7 235 aa13.2□□□□□ -0.3
CTNNA1-205ENST00000517904 PHOX2BQ99453 314 aa13.2□□□□□ -0.3
CTNNA1-205ENST00000517904 MLXIPQ9HAP2 919 aa13.2□□□□□ -0.3
CTNNA1-205ENST00000517904 RC3H2Q9HBD1 1191 aaKnown RBP13.2□□□□□ -0.3
CTNNA1-205ENST00000517904 SETD4Q9NVD3 440 aa13.2□□□□□ -0.3
CTNNA1-205ENST00000517904 ZSWIM5Q9P217 1185 aa13.2□□□□□ -0.3
CTNNA1-205ENST00000517904 VPS13AQ96RL7 3174 aa13.19□□□□□ -0.3
CTNNA1-205ENST00000517904 ZDBF2Q9HCK1 2354 aa13.19□□□□□ -0.3
CTNNA1-205ENST00000517904 MBTPS2O43462 519 aa13.19□□□□□ -0.3
CTNNA1-205ENST00000517904 TBX10O75333 385 aa13.19□□□□□ -0.3
CTNNA1-205ENST00000517904 TGFB3P10600 412 aa13.19□□□□□ -0.3
CTNNA1-205ENST00000517904 SLC35G1Q2M3R5 365 aa13.19□□□□□ -0.3
CTNNA1-205ENST00000517904 HERC4Q5GLZ8 1057 aaPredicted RBP13.19□□□□□ -0.3
CTNNA1-205ENST00000517904 DIEXFQ68CQ4 756 aaKnown RBP13.19□□□□□ -0.3
CTNNA1-205ENST00000517904 TRIM50Q86XT4 487 aa13.19□□□□□ -0.3
CTNNA1-205ENST00000517904 RNF135Q8IUD6 432 aa13.19□□□□□ -0.3
CTNNA1-205ENST00000517904 FIBCD1Q8N539 461 aa13.19□□□□□ -0.3
CTNNA1-205ENST00000517904 APBB2Q92870 758 aa13.19□□□□□ -0.3
CTNNA1-205ENST00000517904 MTMR8Q96EF0 704 aa13.19□□□□□ -0.3
CTNNA1-205ENST00000517904 IL17RAQ96F46 866 aa13.19□□□□□ -0.3
CTNNA1-205ENST00000517904 UPF3BQ9BZI7 483 aaKnown RBP13.19□□□□□ -0.3
CTNNA1-205ENST00000517904 MAP3K20Q9NYL2 800 aaKnown RBP13.19□□□□□ -0.3
CTNNA1-205ENST00000517904 TELO2Q9Y4R8 837 aa13.19□□□□□ -0.3
CTNNA1-205ENST00000517904 SUPT16HQ9Y5B9 1047 aaKnown RBP13.19□□□□□ -0.3
CTNNA1-205ENST00000517904 PCDHA1Q9Y5I3 950 aa13.19□□□□□ -0.3
CTNNA1-205ENST00000517904 ADGRA3Q8IWK6 1321 aa13.18□□□□□ -0.3
CTNNA1-205ENST00000517904 TRIM6-TRIM34B2RNG4 842 aa13.18□□□□□ -0.3
CTNNA1-205ENST00000517904 ZBTB5O15062 677 aa13.18□□□□□ -0.3
CTNNA1-205ENST00000517904 LINC01565O15544 149 aa13.18□□□□□ -0.3
CTNNA1-205ENST00000517904 NCK2O43639 380 aa13.18□□□□□ -0.3
CTNNA1-205ENST00000517904 CSPG5O95196 566 aa13.18□□□□□ -0.3
CTNNA1-205ENST00000517904 CCND2P30279 289 aa13.18□□□□□ -0.3
CTNNA1-205ENST00000517904 BMPR1AP36894 532 aa13.18□□□□□ -0.3
CTNNA1-205ENST00000517904 NT5C2P49902 561 aa13.18□□□□□ -0.3
CTNNA1-205ENST00000517904 ADAM17P78536 824 aa13.18□□□□□ -0.3
CTNNA1-205ENST00000517904 FAM26DQ5JW98 314 aa13.18□□□□□ -0.3
CTNNA1-205ENST00000517904 C11orf84Q9BUA3 381 aaPredicted RBP13.18□□□□□ -0.3
CTNNA1-205ENST00000517904 MAD2L2Q9UI95 211 aa13.18□□□□□ -0.3
CTNNA1-205ENST00000517904 BAZ2BQ9UIF8 2168 aaKnown RBP13.18□□□□□ -0.3
CTNNA1-205ENST00000517904 ZFHX2Q9C0A1 2572 aaPredicted RBP13.17□□□□□ -0.3
CTNNA1-205ENST00000517904 KLRF2D3W0D1 207 aa13.17□□□□□ -0.3
CTNNA1-205ENST00000517904 NOP56O00567 594 aaKnown RBP13.17□□□□□ -0.3
CTNNA1-205ENST00000517904 CHRNA1P02708 482 aa13.17□□□□□ -0.3
CTNNA1-205ENST00000517904 RB1P06400 928 aa13.17□□□□□ -0.3
CTNNA1-205ENST00000517904 SDSP20132 328 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms