RNA–Protein interactions for RNA: ENST00000517862.1

CPNE3-204, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 654 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-204ENST00000517862 FBLN1P23142 703 aa4.4□□□□□ -1.71
CPNE3-204ENST00000517862 CCND3P30281 292 aaPredicted RBP4.4□□□□□ -1.71
CPNE3-204ENST00000517862 USP5P45974 858 aa4.4□□□□□ -1.71
CPNE3-204ENST00000517862 PPIGQ13427 754 aaKnown RBP eCLIP4.4□□□□□ -1.71
CPNE3-204ENST00000517862 MEI1Q5TIA1 1274 aa4.4□□□□□ -1.71
CPNE3-204ENST00000517862 IGF2-ASQ6U949 168 aa4.4□□□□□ -1.71
CPNE3-204ENST00000517862 SIAH1Q8IUQ4 282 aa4.4□□□□□ -1.71
CPNE3-204ENST00000517862 EPS8L3Q8TE67 593 aaKnown RBP4.4□□□□□ -1.71
CPNE3-204ENST00000517862 TRIB2Q92519 343 aa4.4□□□□□ -1.71
CPNE3-204ENST00000517862 ZNF496Q96IT1 587 aaPredicted RBP4.4□□□□□ -1.71
CPNE3-204ENST00000517862 HSH2DQ96JZ2 352 aa4.4□□□□□ -1.71
CPNE3-204ENST00000517862 MTIF3Q9H2K0 278 aaKnown RBP4.4□□□□□ -1.71
CPNE3-204ENST00000517862 JPH1Q9HDC5 661 aaPredicted RBP4.4□□□□□ -1.71
CPNE3-204ENST00000517862 TMEM39AQ9NV64 488 aa4.4□□□□□ -1.71
CPNE3-204ENST00000517862 INPP5FQ9Y2H2 1132 aa4.4□□□□□ -1.71
CPNE3-204ENST00000517862 AK5Q9Y6K8 562 aa4.4□□□□□ -1.71
CPNE3-204ENST00000517862 RPAP1Q9BWH6 1393 aaPredicted RBP4.4□□□□□ -1.71
CPNE3-204ENST00000517862 NF1P21359 2839 aa4.39□□□□□ -1.71
CPNE3-204ENST00000517862 STXBP3O00186 592 aa4.39□□□□□ -1.71
CPNE3-204ENST00000517862 LPXNO60711 386 aa4.39□□□□□ -1.71
CPNE3-204ENST00000517862 HSP90AB1P08238 724 aaKnown RBP4.39□□□□□ -1.71
CPNE3-204ENST00000517862 ACRP10323 421 aa4.39□□□□□ -1.71
CPNE3-204ENST00000517862 ATP2B1P20020 1258 aa4.39□□□□□ -1.71
CPNE3-204ENST00000517862 EIF4BP23588 611 aaKnown RBP4.39□□□□□ -1.71
CPNE3-204ENST00000517862 CTSWP56202 376 aa4.39□□□□□ -1.71
CPNE3-204ENST00000517862 NFIAQ12857 509 aa4.39□□□□□ -1.71
CPNE3-204ENST00000517862 SNX17Q15036 470 aa4.39□□□□□ -1.71
CPNE3-204ENST00000517862 TMEM67Q5HYA8 995 aa4.39□□□□□ -1.71
CPNE3-204ENST00000517862 PSRC1Q6PGN9 363 aaPredicted RBP4.39□□□□□ -1.71
CPNE3-204ENST00000517862 ANKRD23Q86SG2 305 aa4.39□□□□□ -1.71
CPNE3-204ENST00000517862 TP53INP2Q8IXH6 220 aa4.39□□□□□ -1.71
CPNE3-204ENST00000517862 DMRTC2Q8IXT2 367 aaPredicted RBP4.39□□□□□ -1.71
CPNE3-204ENST00000517862 DTWD1Q8N5C7 304 aa4.39□□□□□ -1.71
CPNE3-204ENST00000517862 ZNF280CQ8ND82 737 aa4.39□□□□□ -1.71
CPNE3-204ENST00000517862 RHPN1Q8TCX5 695 aa4.39□□□□□ -1.71
CPNE3-204ENST00000517862 DDX1Q92499 740 aaKnown RBP4.39□□□□□ -1.71
CPNE3-204ENST00000517862 PARK7Q99497 189 aaKnown RBP4.39□□□□□ -1.71
CPNE3-204ENST00000517862 AKTIPQ9H8T0 292 aa4.39□□□□□ -1.71
CPNE3-204ENST00000517862 NEUROD4Q9HD90 331 aa4.39□□□□□ -1.71
CPNE3-204ENST00000517862 DDX41Q9UJV9 622 aaKnown RBP4.39□□□□□ -1.71
CPNE3-204ENST00000517862 USP18Q9UMW8 372 aa4.39□□□□□ -1.71
CPNE3-204ENST00000517862 NIP7Q9Y221 180 aaKnown RBP eCLIP4.39□□□□□ -1.71
CPNE3-204ENST00000517862 CSADQ9Y600 493 aa4.39□□□□□ -1.71
CPNE3-204ENST00000517862 FANCMQ8IYD8 2048 aa4.39□□□□□ -1.71
CPNE3-204ENST00000517862 DNHD1Q96M86 4753 aa4.39□□□□□ -1.71
CPNE3-204ENST00000517862 ABCC12Q96J65 1359 aa4.39□□□□□ -1.71
CPNE3-204ENST00000517862 LAMA5O15230 3695 aa4.39□□□□□ -1.71
CPNE3-204ENST00000517862 A0A1W2PNR3 127 aa4.38□□□□□ -1.71
CPNE3-204ENST00000517862 F6X3S4 739 aa4.38□□□□□ -1.71
CPNE3-204ENST00000517862 PYCARD-AS1I3L0S3 204 aa4.38□□□□□ -1.71
CPNE3-204ENST00000517862 EFCAB14O75071 495 aa4.38□□□□□ -1.71
CPNE3-204ENST00000517862 CPNE3O75131 537 aaKnown RBP4.38□□□□□ -1.71
CPNE3-204ENST00000517862 POLR3DP05423 398 aaPredicted RBP4.38□□□□□ -1.71
CPNE3-204ENST00000517862 CYP2C8P10632 490 aa4.38□□□□□ -1.71
CPNE3-204ENST00000517862 PCSK2P16519 638 aa4.38□□□□□ -1.71
CPNE3-204ENST00000517862 CACNB2Q08289 660 aaPredicted RBP4.38□□□□□ -1.71
CPNE3-204ENST00000517862 NEUROD1Q13562 356 aa4.38□□□□□ -1.71
CPNE3-204ENST00000517862 VGLL4Q14135 290 aa4.38□□□□□ -1.71
CPNE3-204ENST00000517862 TRIP4Q15650 581 aaPredicted RBP4.38□□□□□ -1.71
CPNE3-204ENST00000517862 SMAD2Q15796 467 aaKnown RBP4.38□□□□□ -1.71
CPNE3-204ENST00000517862 CCDC144BQ3MJ40 725 aa4.38□□□□□ -1.71
CPNE3-204ENST00000517862 NBPF12Q5TAG4 269 aaPredicted RBP4.38□□□□□ -1.71
CPNE3-204ENST00000517862 ZC3H14Q6PJT7 736 aaKnown RBP4.38□□□□□ -1.71
CPNE3-204ENST00000517862 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.38□□□□□ -1.71
CPNE3-204ENST00000517862 SLC43A3Q8NBI5 491 aa4.38□□□□□ -1.71
CPNE3-204ENST00000517862 SLC44A5Q8NCS7 719 aa4.38□□□□□ -1.71
CPNE3-204ENST00000517862 NETO1Q8TDF5 533 aa4.38□□□□□ -1.71
CPNE3-204ENST00000517862 FBF1Q8TES7 1133 aa4.38□□□□□ -1.71
CPNE3-204ENST00000517862 FAM84BQ96KN1 310 aaPredicted RBP4.38□□□□□ -1.71
CPNE3-204ENST00000517862 OSBPL7Q9BZF2 842 aa4.38□□□□□ -1.71
CPNE3-204ENST00000517862 TMPRSS5Q9H3S3 457 aa4.38□□□□□ -1.71
CPNE3-204ENST00000517862 PIF1Q9H611 641 aa4.38□□□□□ -1.71
CPNE3-204ENST00000517862 ZNF652Q9Y2D9 606 aa4.38□□□□□ -1.71
CPNE3-204ENST00000517862 DAGLAQ9Y4D2 1042 aa4.38□□□□□ -1.71
CPNE3-204ENST00000517862 PRR19A6NJB7 356 aa4.37□□□□□ -1.71
CPNE3-204ENST00000517862 MICAL2O94851 1124 aa4.37□□□□□ -1.71
CPNE3-204ENST00000517862 STARD3NLO95772 234 aa4.37□□□□□ -1.71
CPNE3-204ENST00000517862 CSF2RAP15509 400 aa4.37□□□□□ -1.71
CPNE3-204ENST00000517862 NCLP19338 710 aaKnown RBP4.37□□□□□ -1.71
CPNE3-204ENST00000517862 ATP4AP20648 1035 aa4.37□□□□□ -1.71
CPNE3-204ENST00000517862 GRNP28799 593 aaKnown RBP4.37□□□□□ -1.71
CPNE3-204ENST00000517862 ITGAEP38570 1179 aa4.37□□□□□ -1.71
CPNE3-204ENST00000517862 IDH3AP50213 366 aa4.37□□□□□ -1.71
CPNE3-204ENST00000517862 GNL2Q13823 731 aaKnown RBP4.37□□□□□ -1.71
CPNE3-204ENST00000517862 CCDC6Q16204 474 aa4.37□□□□□ -1.71
CPNE3-204ENST00000517862 COLEC12Q5KU26 742 aa4.37□□□□□ -1.71
CPNE3-204ENST00000517862 GJC2Q5T442 439 aaPredicted RBP4.37□□□□□ -1.71
CPNE3-204ENST00000517862 MFSD5Q6N075 450 aa4.37□□□□□ -1.71
CPNE3-204ENST00000517862 CLEC4GQ6UXB4 293 aa4.37□□□□□ -1.71
CPNE3-204ENST00000517862 ZNF662Q6ZS27 426 aa4.37□□□□□ -1.71
CPNE3-204ENST00000517862 LCNL1Q6ZST4 164 aa4.37□□□□□ -1.71
CPNE3-204ENST00000517862 FBXO11Q86XK2 927 aa4.37□□□□□ -1.71
CPNE3-204ENST00000517862 TTC16Q8NEE8 873 aa4.37□□□□□ -1.71
CPNE3-204ENST00000517862 GDPD5Q8WTR4 605 aa4.37□□□□□ -1.71
CPNE3-204ENST00000517862 SECISBP2LQ93073 1101 aaKnown RBP4.37□□□□□ -1.71
CPNE3-204ENST00000517862 CCDC74AQ96AQ1 378 aa4.37□□□□□ -1.71
CPNE3-204ENST00000517862 LRIG1Q96JA1 1093 aa4.37□□□□□ -1.71
CPNE3-204ENST00000517862 GMLQ99445 158 aa4.37□□□□□ -1.71
CPNE3-204ENST00000517862 C12orf49Q9H741 205 aa4.37□□□□□ -1.71
CPNE3-204ENST00000517862 NPHS2Q9NP85 383 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms