RNA–Protein interactions for RNA: ENST00000517732.5

LINCR-0001-201, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 562 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-201ENST00000517732 RB1P06400 928 aa10.55□□□□□ -0.72
LINCR-0001-201ENST00000517732 CTSHP09668 335 aa10.55□□□□□ -0.72
LINCR-0001-201ENST00000517732 PARP1P09874 1014 aaKnown RBP10.55□□□□□ -0.72
LINCR-0001-201ENST00000517732 HOXD8P13378 290 aaPredicted RBP10.55□□□□□ -0.72
LINCR-0001-201ENST00000517732 IRS1P35568 1242 aa10.55□□□□□ -0.72
LINCR-0001-201ENST00000517732 SMAD2Q15796 467 aaKnown RBP10.55□□□□□ -0.72
LINCR-0001-201ENST00000517732 CELF3Q5SZQ8 465 aaKnown RBP10.55□□□□□ -0.72
LINCR-0001-201ENST00000517732 C20orf194Q5TEA3 1177 aa10.55□□□□□ -0.72
LINCR-0001-201ENST00000517732 MYSM1Q5VVJ2 828 aa10.55□□□□□ -0.72
LINCR-0001-201ENST00000517732 OTUD7AQ8TE49 926 aaPredicted RBP10.55□□□□□ -0.72
LINCR-0001-201ENST00000517732 IL17RAQ96F46 866 aa10.55□□□□□ -0.72
LINCR-0001-201ENST00000517732 SNX27Q96L92 541 aa10.55□□□□□ -0.72
LINCR-0001-201ENST00000517732 ZKSCAN3Q9BRR0 538 aa10.55□□□□□ -0.72
LINCR-0001-201ENST00000517732 AMNQ9BXJ7 453 aa10.55□□□□□ -0.72
LINCR-0001-201ENST00000517732 CPVLQ9H3G5 476 aa10.55□□□□□ -0.72
LINCR-0001-201ENST00000517732 VAT1LQ9HCJ6 419 aa10.55□□□□□ -0.72
LINCR-0001-201ENST00000517732 H3BRB1 525 aa10.54□□□□□ -0.72
LINCR-0001-201ENST00000517732 ZNF213O14771 459 aa10.54□□□□□ -0.72
LINCR-0001-201ENST00000517732 MBTPS2O43462 519 aa10.54□□□□□ -0.72
LINCR-0001-201ENST00000517732 SORBS3O60504 671 aa10.54□□□□□ -0.72
LINCR-0001-201ENST00000517732 TGFB3P10600 412 aa10.54□□□□□ -0.72
LINCR-0001-201ENST00000517732 CCND2P30279 289 aa10.54□□□□□ -0.72
LINCR-0001-201ENST00000517732 TTC3P53804 2025 aa10.54□□□□□ -0.72
LINCR-0001-201ENST00000517732 PTPN5P54829 565 aa10.54□□□□□ -0.72
LINCR-0001-201ENST00000517732 TRAF1Q13077 416 aa10.54□□□□□ -0.72
LINCR-0001-201ENST00000517732 SMAD4Q13485 552 aaKnown RBP10.54□□□□□ -0.72
LINCR-0001-201ENST00000517732 COL19A1Q14993 1142 aa10.54□□□□□ -0.72
LINCR-0001-201ENST00000517732 CLUL1Q15846 466 aa10.54□□□□□ -0.72
LINCR-0001-201ENST00000517732 PKN1Q16512 942 aa10.54□□□□□ -0.72
LINCR-0001-201ENST00000517732 HSDL1Q3SXM5 330 aa10.54□□□□□ -0.72
LINCR-0001-201ENST00000517732 GNPTABQ3T906 1256 aa10.54□□□□□ -0.72
LINCR-0001-201ENST00000517732 HERC4Q5GLZ8 1057 aaPredicted RBP10.54□□□□□ -0.72
LINCR-0001-201ENST00000517732 TICAM2Q86XR7 235 aa10.54□□□□□ -0.72
LINCR-0001-201ENST00000517732 SUGP1Q8IWZ8 645 aaKnown RBP10.54□□□□□ -0.72
LINCR-0001-201ENST00000517732 KMT2EQ8IZD2 1858 aa10.54□□□□□ -0.72
LINCR-0001-201ENST00000517732 SAMD3Q8N6K7 520 aa10.54□□□□□ -0.72
LINCR-0001-201ENST00000517732 PDCD2LQ9BRP1 358 aa10.54□□□□□ -0.72
LINCR-0001-201ENST00000517732 TUT1Q9H6E5 874 aaKnown RBP10.54□□□□□ -0.72
LINCR-0001-201ENST00000517732 MUTYHQ9UIF7 546 aa10.54□□□□□ -0.72
LINCR-0001-201ENST00000517732 ZNF215Q9UL58 517 aaPredicted RBP10.54□□□□□ -0.72
LINCR-0001-201ENST00000517732 A0A0D9SFI3 127 aa10.53□□□□□ -0.72
LINCR-0001-201ENST00000517732 C5orf67F2Z3F1 127 aa10.53□□□□□ -0.72
LINCR-0001-201ENST00000517732 STXBP3O00186 592 aa10.53□□□□□ -0.72
LINCR-0001-201ENST00000517732 TREHO43280 583 aa10.53□□□□□ -0.72
LINCR-0001-201ENST00000517732 LGALS2P05162 132 aa10.53□□□□□ -0.72
LINCR-0001-201ENST00000517732 SMIM10L2AP0DMW4 78 aa10.53□□□□□ -0.72
LINCR-0001-201ENST00000517732 SMIM10L2BP0DMW5 78 aa10.53□□□□□ -0.72
LINCR-0001-201ENST00000517732 UBA1P22314 1058 aaKnown RBP10.53□□□□□ -0.72
LINCR-0001-201ENST00000517732 NDUFV1P49821 464 aa10.53□□□□□ -0.72
LINCR-0001-201ENST00000517732 HSD17B4P51659 736 aa10.53□□□□□ -0.72
LINCR-0001-201ENST00000517732 PGM5Q15124 567 aa10.53□□□□□ -0.72
LINCR-0001-201ENST00000517732 RNF135Q8IUD6 432 aa10.53□□□□□ -0.72
LINCR-0001-201ENST00000517732 TBC1D10CQ8IV04 446 aa10.53□□□□□ -0.72
LINCR-0001-201ENST00000517732 FAM227BQ96M60 508 aa10.53□□□□□ -0.72
LINCR-0001-201ENST00000517732 C16orf70Q9BSU1 422 aa10.53□□□□□ -0.72
LINCR-0001-201ENST00000517732 USP26Q9BXU7 913 aa10.53□□□□□ -0.72
LINCR-0001-201ENST00000517732 CD207Q9UJ71 328 aa10.53□□□□□ -0.72
LINCR-0001-201ENST00000517732 BAZ2BQ9UIF8 2168 aaKnown RBP10.53□□□□□ -0.72
LINCR-0001-201ENST00000517732 NEDD4P46934 1319 aa10.53□□□□□ -0.72
LINCR-0001-201ENST00000517732 ADGRA3Q8IWK6 1321 aa10.53□□□□□ -0.72
LINCR-0001-201ENST00000517732 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.52□□□□□ -0.73
LINCR-0001-201ENST00000517732 ST18O60284 1047 aa10.52□□□□□ -0.73
LINCR-0001-201ENST00000517732 KDM4AO75164 1064 aa10.52□□□□□ -0.73
LINCR-0001-201ENST00000517732 BMPR1AP36894 532 aa10.52□□□□□ -0.73
LINCR-0001-201ENST00000517732 LTBRP36941 435 aa10.52□□□□□ -0.73
LINCR-0001-201ENST00000517732 NMIQ13287 307 aaPredicted RBP10.52□□□□□ -0.73
LINCR-0001-201ENST00000517732 NEDD9Q14511 834 aa10.52□□□□□ -0.73
LINCR-0001-201ENST00000517732 HIC1Q14526 733 aa10.52□□□□□ -0.73
LINCR-0001-201ENST00000517732 CTC1Q2NKJ3 1217 aa10.52□□□□□ -0.73
LINCR-0001-201ENST00000517732 BMP8AQ7Z5Y6 402 aa10.52□□□□□ -0.73
LINCR-0001-201ENST00000517732 EDAQ92838 391 aa10.52□□□□□ -0.73
LINCR-0001-201ENST00000517732 RNPEPQ9H4A4 650 aa10.52□□□□□ -0.73
LINCR-0001-201ENST00000517732 IGFLR1Q9H665 355 aa10.52□□□□□ -0.73
LINCR-0001-201ENST00000517732 JMJD4Q9H9V9 463 aa10.52□□□□□ -0.73
LINCR-0001-201ENST00000517732 GCOM1H8Y6P7 765 aaPredicted RBP10.51□□□□□ -0.73
LINCR-0001-201ENST00000517732 GRM6O15303 877 aa10.51□□□□□ -0.73
LINCR-0001-201ENST00000517732 RGS20O76081 388 aa10.51□□□□□ -0.73
LINCR-0001-201ENST00000517732 CSPG5O95196 566 aa10.51□□□□□ -0.73
LINCR-0001-201ENST00000517732 MMP1P03956 469 aa10.51□□□□□ -0.73
LINCR-0001-201ENST00000517732 POLR2MP0CAP2 368 aa10.51□□□□□ -0.73
LINCR-0001-201ENST00000517732 HOXC8P31273 242 aa10.51□□□□□ -0.73
LINCR-0001-201ENST00000517732 ARHGAP4P98171 946 aa10.51□□□□□ -0.73
LINCR-0001-201ENST00000517732 GHRHRQ02643 423 aa10.51□□□□□ -0.73
LINCR-0001-201ENST00000517732 HYAL1Q12794 435 aa10.51□□□□□ -0.73
LINCR-0001-201ENST00000517732 BTG3Q14201 252 aaPredicted RBP10.51□□□□□ -0.73
LINCR-0001-201ENST00000517732 ANKRD45Q5TZF3 282 aa10.51□□□□□ -0.73
LINCR-0001-201ENST00000517732 STOX1Q6ZVD7 989 aa10.51□□□□□ -0.73
LINCR-0001-201ENST00000517732 RSPH3Q86UC2 560 aa10.51□□□□□ -0.73
LINCR-0001-201ENST00000517732 ZNF589Q86UQ0 364 aaPredicted RBP10.51□□□□□ -0.73
LINCR-0001-201ENST00000517732 VSIG10LQ86VR7 867 aa10.51□□□□□ -0.73
LINCR-0001-201ENST00000517732 PBXIP1Q96AQ6 731 aa10.51□□□□□ -0.73
LINCR-0001-201ENST00000517732 ZSCAN10Q96SZ4 725 aaPredicted RBP10.51□□□□□ -0.73
LINCR-0001-201ENST00000517732 UBAC1Q9BSL1 405 aa10.51□□□□□ -0.73
LINCR-0001-201ENST00000517732 PLVAPQ9BX97 442 aa10.51□□□□□ -0.73
LINCR-0001-201ENST00000517732 IRF2BPLQ9H1B7 796 aa10.51□□□□□ -0.73
LINCR-0001-201ENST00000517732 PCDHA1Q9Y5I3 950 aa10.51□□□□□ -0.73
LINCR-0001-201ENST00000517732 SALL3Q9BXA9 1300 aa10.51□□□□□ -0.73
LINCR-0001-201ENST00000517732 PLXNA4Q9HCM2 1894 aa10.51□□□□□ -0.73
LINCR-0001-201ENST00000517732 TMEM221A6NGB7 291 aa10.5□□□□□ -0.73
LINCR-0001-201ENST00000517732 B4E1Z4 1266 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms