RNA–Protein interactions for RNA: ENST00000517181.1

RNU1-54P-201, Transcript of RNA, U1 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU1-54P, Length 120 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-54P-201ENST00000517181 ZBTB38Q8NAP3 1195 aaPredicted RBP4.28□□□□□ -1.72
RNU1-54P-201ENST00000517181 PIP4K2CQ8TBX8 421 aa4.28□□□□□ -1.72
RNU1-54P-201ENST00000517181 CHAMP1Q96JM3 812 aa4.28□□□□□ -1.72
RNU1-54P-201ENST00000517181 KRTAP4-11Q9BYQ6 195 aa4.28□□□□□ -1.72
RNU1-54P-201ENST00000517181 KRTAP4-2Q9BYR5 136 aa4.28□□□□□ -1.72
RNU1-54P-201ENST00000517181 CNOT11Q9UKZ1 510 aaKnown RBP4.28□□□□□ -1.72
RNU1-54P-201ENST00000517181 KRIT1O00522 736 aa4.27□□□□□ -1.73
RNU1-54P-201ENST00000517181 SMARCA5O60264 1052 aaPredicted RBP4.27□□□□□ -1.73
RNU1-54P-201ENST00000517181 MAFKO60675 156 aa4.27□□□□□ -1.73
RNU1-54P-201ENST00000517181 GJA9P57773 515 aa4.27□□□□□ -1.73
RNU1-54P-201ENST00000517181 EFEMP1Q12805 493 aa4.27□□□□□ -1.73
RNU1-54P-201ENST00000517181 STK32CQ86UX6 486 aa4.27□□□□□ -1.73
RNU1-54P-201ENST00000517181 SCUBE1Q8IWY4 988 aa4.27□□□□□ -1.73
RNU1-54P-201ENST00000517181 TRIM48Q8IWZ4 208 aa4.27□□□□□ -1.73
RNU1-54P-201ENST00000517181 CLEC4DQ8WXI8 215 aa4.27□□□□□ -1.73
RNU1-54P-201ENST00000517181 EXOC2Q96KP1 924 aa4.27□□□□□ -1.73
RNU1-54P-201ENST00000517181 RBM15Q96T37 977 aaKnown RBP eCLIP4.27□□□□□ -1.73
RNU1-54P-201ENST00000517181 HIRIP3Q9BW71 556 aaPredicted RBP4.27□□□□□ -1.73
RNU1-54P-201ENST00000517181 TELO2Q9Y4R8 837 aa4.27□□□□□ -1.73
RNU1-54P-201ENST00000517181 FAM221BA6H8Z2 402 aa4.26□□□□□ -1.73
RNU1-54P-201ENST00000517181 C9orf118A6NHY6 69 aa4.26□□□□□ -1.73
RNU1-54P-201ENST00000517181 U2SURPO15042 1029 aaKnown RBP4.26□□□□□ -1.73
RNU1-54P-201ENST00000517181 NKRFO15226 690 aaKnown RBP eCLIP4.26□□□□□ -1.73
RNU1-54P-201ENST00000517181 SOD2P04179 222 aa4.26□□□□□ -1.73
RNU1-54P-201ENST00000517181 CELA3BP08861 270 aa4.26□□□□□ -1.73
RNU1-54P-201ENST00000517181 COL6A1P12109 1028 aa4.26□□□□□ -1.73
RNU1-54P-201ENST00000517181 SSRP1Q08945 709 aaKnown RBP4.26□□□□□ -1.73
RNU1-54P-201ENST00000517181 MTERF2Q49AM1 385 aa4.26□□□□□ -1.73
RNU1-54P-201ENST00000517181 DPH6Q7L8W6 267 aa4.26□□□□□ -1.73
RNU1-54P-201ENST00000517181 MAMDC2Q7Z304 686 aaPredicted RBP4.26□□□□□ -1.73
RNU1-54P-201ENST00000517181 DTX3Q8N9I9 347 aa4.26□□□□□ -1.73
RNU1-54P-201ENST00000517181 SH3RF2Q8TEC5 729 aa4.26□□□□□ -1.73
RNU1-54P-201ENST00000517181 KISS1RQ969F8 398 aaPredicted RBP4.26□□□□□ -1.73
RNU1-54P-201ENST00000517181 MBD6Q96DN6 1003 aa4.26□□□□□ -1.73
RNU1-54P-201ENST00000517181 YTHDC1Q96MU7 727 aaKnown RBP4.26□□□□□ -1.73
RNU1-54P-201ENST00000517181 TMEM209Q96SK2 561 aa4.26□□□□□ -1.73
RNU1-54P-201ENST00000517181 TRBV23-1A0A0A0MS06 115 aa4.25□□□□□ -1.73
RNU1-54P-201ENST00000517181 TCRBV5S4A2TA0A5A2 114 aa4.25□□□□□ -1.73
RNU1-54P-201ENST00000517181 ARVCFO00192 962 aa4.25□□□□□ -1.73
RNU1-54P-201ENST00000517181 SLC27A2O14975 620 aa4.25□□□□□ -1.73
RNU1-54P-201ENST00000517181 FAM153BP0C7A2 387 aa4.25□□□□□ -1.73
RNU1-54P-201ENST00000517181 MLLT6P55198 1093 aaPredicted RBP4.25□□□□□ -1.73
RNU1-54P-201ENST00000517181 SUMO1P63165 101 aaKnown RBP4.25□□□□□ -1.73
RNU1-54P-201ENST00000517181 NFKB2Q00653 900 aa4.25□□□□□ -1.73
RNU1-54P-201ENST00000517181 SPIRE1Q08AE8 756 aa4.25□□□□□ -1.73
RNU1-54P-201ENST00000517181 RGL3Q3MIN7 710 aa4.25□□□□□ -1.73
RNU1-54P-201ENST00000517181 FAM209AQ5JX71 171 aa4.25□□□□□ -1.73
RNU1-54P-201ENST00000517181 PKN3Q6P5Z2 889 aa4.25□□□□□ -1.73
RNU1-54P-201ENST00000517181 TXNDC5Q8NBS9 432 aaKnown RBP4.25□□□□□ -1.73
RNU1-54P-201ENST00000517181 ZCCHC14Q8WYQ9 949 aaKnown RBP4.25□□□□□ -1.73
RNU1-54P-201ENST00000517181 PTPRN2Q92932 1015 aa4.25□□□□□ -1.73
RNU1-54P-201ENST00000517181 MKL1Q969V6 931 aa4.25□□□□□ -1.73
RNU1-54P-201ENST00000517181 YIPF4Q9BSR8 244 aa4.25□□□□□ -1.73
RNU1-54P-201ENST00000517181 IPPKQ9H8X2 491 aa4.25□□□□□ -1.73
RNU1-54P-201ENST00000517181 USP40Q9NVE5 1235 aa4.25□□□□□ -1.73
RNU1-54P-201ENST00000517181 SNTG2Q9NY99 539 aa4.25□□□□□ -1.73
RNU1-54P-201ENST00000517181 RBPJLQ9UBG7 517 aa4.25□□□□□ -1.73
RNU1-54P-201ENST00000517181 TRAF6Q9Y4K3 522 aa4.25□□□□□ -1.73
RNU1-54P-201ENST00000517181 FAM47E-STBD1D6RA91 191 aa4.24□□□□□ -1.73
RNU1-54P-201ENST00000517181 ACOT7O00154 380 aa4.24□□□□□ -1.73
RNU1-54P-201ENST00000517181 DDX3XO00571 662 aaKnown RBP eCLIP4.24□□□□□ -1.73
RNU1-54P-201ENST00000517181 AQP7O14520 342 aa4.24□□□□□ -1.73
RNU1-54P-201ENST00000517181 LTFP02788 710 aa4.24□□□□□ -1.73
RNU1-54P-201ENST00000517181 ITGB3P05106 788 aa4.24□□□□□ -1.73
RNU1-54P-201ENST00000517181 COL6A2P12110 1019 aa4.24□□□□□ -1.73
RNU1-54P-201ENST00000517181 FAHP16930 419 aa4.24□□□□□ -1.73
RNU1-54P-201ENST00000517181 CNR2P34972 360 aa4.24□□□□□ -1.73
RNU1-54P-201ENST00000517181 GTF2F1P35269 517 aaKnown RBP eCLIP4.24□□□□□ -1.73
RNU1-54P-201ENST00000517181 TUSC3Q13454 348 aa4.24□□□□□ -1.73
RNU1-54P-201ENST00000517181 ZC3H12BQ5HYM0 836 aaKnown RBP4.24□□□□□ -1.73
RNU1-54P-201ENST00000517181 FERMT3Q86UX7 667 aa4.24□□□□□ -1.73
RNU1-54P-201ENST00000517181 RBM12BQ8IXT5 1001 aaKnown RBP4.24□□□□□ -1.73
RNU1-54P-201ENST00000517181 PCDH19Q8TAB3 1148 aa4.24□□□□□ -1.73
RNU1-54P-201ENST00000517181 CLIC6Q96NY7 704 aa4.24□□□□□ -1.73
RNU1-54P-201ENST00000517181 DEPDC7Q96QD5 511 aa4.24□□□□□ -1.73
RNU1-54P-201ENST00000517181 WRNIP1Q96S55 665 aa4.24□□□□□ -1.73
RNU1-54P-201ENST00000517181 SSBP3Q9BWW4 388 aaPredicted RBP4.24□□□□□ -1.73
RNU1-54P-201ENST00000517181 PFDN2Q9UHV9 154 aa4.24□□□□□ -1.73
RNU1-54P-201ENST00000517181 DSEQ9UL01 958 aa4.24□□□□□ -1.73
RNU1-54P-201ENST00000517181 MROH6A6NGR9 719 aa4.23□□□□□ -1.73
RNU1-54P-201ENST00000517181 B4GALT3O60512 393 aa4.23□□□□□ -1.73
RNU1-54P-201ENST00000517181 CHGBP05060 677 aa4.23□□□□□ -1.73
RNU1-54P-201ENST00000517181 GNAT1P11488 350 aa4.23□□□□□ -1.73
RNU1-54P-201ENST00000517181 IL13P35225 146 aa4.23□□□□□ -1.73
RNU1-54P-201ENST00000517181 GABREP78334 506 aa4.23□□□□□ -1.73
RNU1-54P-201ENST00000517181 KIAA2012Q0VF49 1180 aa4.23□□□□□ -1.73
RNU1-54P-201ENST00000517181 PAK1Q13153 545 aa4.23□□□□□ -1.73
RNU1-54P-201ENST00000517181 TBC1D10BQ4KMP7 808 aaPredicted RBP4.23□□□□□ -1.73
RNU1-54P-201ENST00000517181 PAN2Q504Q3 1202 aaKnown RBP4.23□□□□□ -1.73
RNU1-54P-201ENST00000517181 TRIM61Q5EBN2 209 aa4.23□□□□□ -1.73
RNU1-54P-201ENST00000517181 UBXN11Q5T124 520 aa4.23□□□□□ -1.73
RNU1-54P-201ENST00000517181 ERICH6BQ5W0A0 696 aa4.23□□□□□ -1.73
RNU1-54P-201ENST00000517181 MCTP2Q6DN12 878 aa4.23□□□□□ -1.73
RNU1-54P-201ENST00000517181 KCTD1Q719H9 257 aa4.23□□□□□ -1.73
RNU1-54P-201ENST00000517181 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.23□□□□□ -1.73
RNU1-54P-201ENST00000517181 GSTCDQ8NEC7 633 aa4.23□□□□□ -1.73
RNU1-54P-201ENST00000517181 DDX1Q92499 740 aaKnown RBP4.23□□□□□ -1.73
RNU1-54P-201ENST00000517181 ZSWIM3Q96MP5 696 aa4.23□□□□□ -1.73
RNU1-54P-201ENST00000517181 KCNJ15Q99712 375 aa4.23□□□□□ -1.73
RNU1-54P-201ENST00000517181 ALG1Q9BT22 464 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms