RNA–Protein interactions for RNA: ENST00000516991.1

SCARNA20.5-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 142 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.5-201ENST00000516991 GNAT1P11488 350 aa16.85■□□□□ 0.29
SCARNA20.5-201ENST00000516991 BMP1P13497 986 aa16.85■□□□□ 0.29
SCARNA20.5-201ENST00000516991 SMARCA1P28370 1054 aa16.85■□□□□ 0.29
SCARNA20.5-201ENST00000516991 THPOP40225 353 aa16.85■□□□□ 0.29
SCARNA20.5-201ENST00000516991 GNAQP50148 359 aa16.85■□□□□ 0.29
SCARNA20.5-201ENST00000516991 ANTXR2P58335 489 aa16.85■□□□□ 0.29
SCARNA20.5-201ENST00000516991 MRPS9P82933 396 aaKnown RBP16.85■□□□□ 0.29
SCARNA20.5-201ENST00000516991 ZNF200P98182 395 aaPredicted RBP16.85■□□□□ 0.29
SCARNA20.5-201ENST00000516991 TFF2Q03403 129 aa16.85■□□□□ 0.29
SCARNA20.5-201ENST00000516991 MBTPS1Q14703 1052 aa16.85■□□□□ 0.29
SCARNA20.5-201ENST00000516991 CASC1Q6TDU7 716 aa16.85■□□□□ 0.29
SCARNA20.5-201ENST00000516991 ZNF654Q8IZM8 581 aa16.85■□□□□ 0.29
SCARNA20.5-201ENST00000516991 IGDCC4Q8TDY8 1250 aa16.85■□□□□ 0.29
SCARNA20.5-201ENST00000516991 GPKOWQ92917 476 aaPredicted RBP eCLIP16.85■□□□□ 0.29
SCARNA20.5-201ENST00000516991 MAP4K1Q92918 833 aa16.85■□□□□ 0.29
SCARNA20.5-201ENST00000516991 LZTS2Q9BRK4 669 aa16.85■□□□□ 0.29
SCARNA20.5-201ENST00000516991 ZNF215Q9UL58 517 aaPredicted RBP16.85■□□□□ 0.29
SCARNA20.5-201ENST00000516991 RBM8AQ9Y5S9 174 aaKnown RBP16.85■□□□□ 0.29
SCARNA20.5-201ENST00000516991 TAF6LQ9Y6J9 622 aa16.85■□□□□ 0.29
SCARNA20.5-201ENST00000516991 TCF20Q9UGU0 1960 aaKnown RBP16.85■□□□□ 0.29
SCARNA20.5-201ENST00000516991 REV3LO60673 3130 aa16.84■□□□□ 0.29
SCARNA20.5-201ENST00000516991 SPATA31C2B4DYI2 1134 aa16.84■□□□□ 0.29
SCARNA20.5-201ENST00000516991 LPXNO60711 386 aa16.84■□□□□ 0.29
SCARNA20.5-201ENST00000516991 AMHP03971 560 aa16.84■□□□□ 0.29
SCARNA20.5-201ENST00000516991 ERVK-21P61565 698 aa16.84■□□□□ 0.29
SCARNA20.5-201ENST00000516991 HIC1Q14526 733 aa16.84■□□□□ 0.29
SCARNA20.5-201ENST00000516991 TCTN1Q2MV58 587 aa16.84■□□□□ 0.29
SCARNA20.5-201ENST00000516991 PCNX4Q63HM2 1172 aa16.84■□□□□ 0.29
SCARNA20.5-201ENST00000516991 KRT40Q6A162 431 aa16.84■□□□□ 0.29
SCARNA20.5-201ENST00000516991 TMCO2Q7Z6W1 182 aaPredicted RBP16.84■□□□□ 0.29
SCARNA20.5-201ENST00000516991 SMARCC2Q8TAQ2 1214 aa16.84■□□□□ 0.29
SCARNA20.5-201ENST00000516991 GDPD5Q8WTR4 605 aa16.84■□□□□ 0.29
SCARNA20.5-201ENST00000516991 HLA-CQ95604 372 aa16.84■□□□□ 0.29
SCARNA20.5-201ENST00000516991 LY9Q9HBG7 655 aa16.84■□□□□ 0.29
SCARNA20.5-201ENST00000516991 INSL6Q9Y581 213 aa16.84■□□□□ 0.29
SCARNA20.5-201ENST00000516991 SUPT16HQ9Y5B9 1047 aaKnown RBP16.84■□□□□ 0.29
SCARNA20.5-201ENST00000516991 BRWD1Q9NSI6 2320 aa16.84■□□□□ 0.29
SCARNA20.5-201ENST00000516991 LINC01553A4QN01 128 aa16.83■□□□□ 0.28
SCARNA20.5-201ENST00000516991 PIK3CDO00329 1044 aa16.83■□□□□ 0.28
SCARNA20.5-201ENST00000516991 KCNQ1P51787 676 aa16.83■□□□□ 0.28
SCARNA20.5-201ENST00000516991 PLEKHG4Q58EX7 1191 aa16.83■□□□□ 0.28
SCARNA20.5-201ENST00000516991 TMTC2Q8N394 836 aa16.83■□□□□ 0.28
SCARNA20.5-201ENST00000516991 GIMAP8Q8ND71 665 aaPredicted RBP16.83■□□□□ 0.28
SCARNA20.5-201ENST00000516991 DBF4BQ8NFT6 615 aa16.83■□□□□ 0.28
SCARNA20.5-201ENST00000516991 PIBF1Q8WXW3 757 aa16.83■□□□□ 0.28
SCARNA20.5-201ENST00000516991 SEPT8Q92599 483 aa16.83■□□□□ 0.28
SCARNA20.5-201ENST00000516991 ZFP91Q96JP5 570 aaPredicted RBP16.83■□□□□ 0.28
SCARNA20.5-201ENST00000516991 TMEM87BQ96K49 555 aa16.83■□□□□ 0.28
SCARNA20.5-201ENST00000516991 GPR20Q99678 358 aa16.83■□□□□ 0.28
SCARNA20.5-201ENST00000516991 SENP7Q9BQF6 1050 aa16.83■□□□□ 0.28
SCARNA20.5-201ENST00000516991 DOCK5Q9H7D0 1870 aa16.83■□□□□ 0.28
SCARNA20.5-201ENST00000516991 COL4A6Q14031 1691 aa16.82■□□□□ 0.28
SCARNA20.5-201ENST00000516991 PRC1O43663 620 aa16.82■□□□□ 0.28
SCARNA20.5-201ENST00000516991 CALM1P0DP23 149 aa16.82■□□□□ 0.28
SCARNA20.5-201ENST00000516991 CALM2P0DP24 149 aa16.82■□□□□ 0.28
SCARNA20.5-201ENST00000516991 CALM3P0DP25 149 aa16.82■□□□□ 0.28
SCARNA20.5-201ENST00000516991 MCM5P33992 734 aa16.82■□□□□ 0.28
SCARNA20.5-201ENST00000516991 SEMA3FQ13275 785 aa16.82■□□□□ 0.28
SCARNA20.5-201ENST00000516991 MKRN4PQ13434 485 aaPredicted RBP16.82■□□□□ 0.28
SCARNA20.5-201ENST00000516991 CYFIP1Q7L576 1253 aa16.82■□□□□ 0.28
SCARNA20.5-201ENST00000516991 SPRED2Q7Z698 418 aa16.82■□□□□ 0.28
SCARNA20.5-201ENST00000516991 NLRX1Q86UT6 975 aa16.82■□□□□ 0.28
SCARNA20.5-201ENST00000516991 CDHR1Q96JP9 859 aa16.82■□□□□ 0.28
SCARNA20.5-201ENST00000516991 KAT6AQ92794 2004 aa16.82■□□□□ 0.28
SCARNA20.5-201ENST00000516991 CCDC69A6NI79 296 aa16.81■□□□□ 0.28
SCARNA20.5-201ENST00000516991 TREHO43280 583 aa16.81■□□□□ 0.28
SCARNA20.5-201ENST00000516991 HTRA4P83105 476 aaPredicted RBP16.81■□□□□ 0.28
SCARNA20.5-201ENST00000516991 FAM117BQ6P1L5 589 aa16.81■□□□□ 0.28
SCARNA20.5-201ENST00000516991 NFXL1Q6ZNB6 911 aa16.81■□□□□ 0.28
SCARNA20.5-201ENST00000516991 MYOCDQ8IZQ8 938 aa16.81■□□□□ 0.28
SCARNA20.5-201ENST00000516991 GPRASP2Q96D09 838 aa16.81■□□□□ 0.28
SCARNA20.5-201ENST00000516991 SAMD11Q96NU1 681 aa16.81■□□□□ 0.28
SCARNA20.5-201ENST00000516991 NECAB3Q96P71 396 aaPredicted RBP16.81■□□□□ 0.28
SCARNA20.5-201ENST00000516991 MYL10Q9BUA6 226 aa16.81■□□□□ 0.28
SCARNA20.5-201ENST00000516991 RNPEPQ9H4A4 650 aa16.81■□□□□ 0.28
SCARNA20.5-201ENST00000516991 SUGCTQ9HAC7 445 aa16.81■□□□□ 0.28
SCARNA20.5-201ENST00000516991 RTEL1Q9NZ71 1219 aa16.81■□□□□ 0.28
SCARNA20.5-201ENST00000516991 MTUS1Q9ULD2 1270 aa16.81■□□□□ 0.28
SCARNA20.5-201ENST00000516991 SH2B2O14492 632 aaPredicted RBP16.8■□□□□ 0.28
SCARNA20.5-201ENST00000516991 MEIS2O14770 477 aa16.8■□□□□ 0.28
SCARNA20.5-201ENST00000516991 COL9A1P20849 921 aa16.8■□□□□ 0.28
SCARNA20.5-201ENST00000516991 USP17L6PQ6QN14 398 aa16.8■□□□□ 0.28
SCARNA20.5-201ENST00000516991 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.8■□□□□ 0.28
SCARNA20.5-201ENST00000516991 TRIM50Q86XT4 487 aa16.8■□□□□ 0.28
SCARNA20.5-201ENST00000516991 FBXO22Q8NEZ5 403 aa16.8■□□□□ 0.28
SCARNA20.5-201ENST00000516991 SP7Q8TDD2 431 aaPredicted RBP16.8■□□□□ 0.28
SCARNA20.5-201ENST00000516991 APBB2Q92870 758 aa16.8■□□□□ 0.28
SCARNA20.5-201ENST00000516991 NRCAMQ92823 1304 aa16.79■□□□□ 0.28
SCARNA20.5-201ENST00000516991 CTSHP09668 335 aa16.79■□□□□ 0.28
SCARNA20.5-201ENST00000516991 LIFRP42702 1097 aa16.79■□□□□ 0.28
SCARNA20.5-201ENST00000516991 LMBR1Q8WVP7 490 aa16.79■□□□□ 0.28
SCARNA20.5-201ENST00000516991 C1QTNF1Q9BXJ1 281 aa16.79■□□□□ 0.28
SCARNA20.5-201ENST00000516991 BCAS3Q9H6U6 928 aa16.79■□□□□ 0.28
SCARNA20.5-201ENST00000516991 SETD4Q9NVD3 440 aa16.79■□□□□ 0.28
SCARNA20.5-201ENST00000516991 PLEKHA8P1O95397 391 aa16.78■□□□□ 0.28
SCARNA20.5-201ENST00000516991 ADAM17P78536 824 aa16.78■□□□□ 0.28
SCARNA20.5-201ENST00000516991 ARHGAP4P98171 946 aa16.78■□□□□ 0.28
SCARNA20.5-201ENST00000516991 SP4Q02446 784 aa16.78■□□□□ 0.28
SCARNA20.5-201ENST00000516991 PTPROQ16827 1216 aa16.78■□□□□ 0.28
SCARNA20.5-201ENST00000516991 FAM26DQ5JW98 314 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms