RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 RTN4RL1Q86UN2 441 aaPredicted RBP9.62□□□□□ -0.87
SCARNA20.3-201ENST00000516913 MCF2L2Q86YR7 1114 aa9.62□□□□□ -0.87
SCARNA20.3-201ENST00000516913 RAB11FIP4Q86YS3 637 aa9.62□□□□□ -0.87
SCARNA20.3-201ENST00000516913 C7orf31Q8N865 590 aa9.62□□□□□ -0.87
SCARNA20.3-201ENST00000516913 LINC01599Q8WXQ3 324 aa9.62□□□□□ -0.87
SCARNA20.3-201ENST00000516913 INPP4AQ96PE3 977 aaPredicted RBP9.62□□□□□ -0.87
SCARNA20.3-201ENST00000516913 PCYT2Q99447 389 aa9.62□□□□□ -0.87
SCARNA20.3-201ENST00000516913 GPR20Q99678 358 aa9.62□□□□□ -0.87
SCARNA20.3-201ENST00000516913 RC3H2Q9HBD1 1191 aaKnown RBP9.62□□□□□ -0.87
SCARNA20.3-201ENST00000516913 NOD1Q9Y239 953 aa9.62□□□□□ -0.87
SCARNA20.3-201ENST00000516913 ABHD14A-ACY1A0A1B0GW23 586 aa9.61□□□□□ -0.87
SCARNA20.3-201ENST00000516913 GSTTP1A0A1W2PQM5 241 aa9.61□□□□□ -0.87
SCARNA20.3-201ENST00000516913 DHX16O60231 1041 aaKnown RBP9.61□□□□□ -0.87
SCARNA20.3-201ENST00000516913 IL9P15248 144 aa9.61□□□□□ -0.87
SCARNA20.3-201ENST00000516913 RXRAP19793 462 aa9.61□□□□□ -0.87
SCARNA20.3-201ENST00000516913 ICAM3P32942 547 aa9.61□□□□□ -0.87
SCARNA20.3-201ENST00000516913 THPOP40225 353 aa9.61□□□□□ -0.87
SCARNA20.3-201ENST00000516913 DLX2Q07687 328 aaPredicted RBP9.61□□□□□ -0.87
SCARNA20.3-201ENST00000516913 CAMK1Q14012 370 aa9.61□□□□□ -0.87
SCARNA20.3-201ENST00000516913 COL19A1Q14993 1142 aa9.61□□□□□ -0.87
SCARNA20.3-201ENST00000516913 BRDTQ58F21 947 aaPredicted RBP9.61□□□□□ -0.87
SCARNA20.3-201ENST00000516913 MARCH8Q5T0T0 291 aa9.61□□□□□ -0.87
SCARNA20.3-201ENST00000516913 TYW1BQ6NUM6 668 aa9.61□□□□□ -0.87
SCARNA20.3-201ENST00000516913 CRIPAKQ8N1N5 446 aa9.61□□□□□ -0.87
SCARNA20.3-201ENST00000516913 SRBD1Q8N5C6 995 aaKnown RBP9.61□□□□□ -0.87
SCARNA20.3-201ENST00000516913 HLA-CQ95604 372 aa9.61□□□□□ -0.87
SCARNA20.3-201ENST00000516913 KRT23Q9C075 422 aa9.61□□□□□ -0.87
SCARNA20.3-201ENST00000516913 MAF1Q9H063 256 aa9.61□□□□□ -0.87
SCARNA20.3-201ENST00000516913 LY9Q9HBG7 655 aa9.61□□□□□ -0.87
SCARNA20.3-201ENST00000516913 PNMA2Q9UL42 364 aa9.61□□□□□ -0.87
SCARNA20.3-201ENST00000516913 RAD50Q92878 1312 aa9.6□□□□□ -0.87
SCARNA20.3-201ENST00000516913 PNMA6FA0A0J9YX94 578 aa9.6□□□□□ -0.87
SCARNA20.3-201ENST00000516913 POTEB3A0JP26 581 aa9.6□□□□□ -0.87
SCARNA20.3-201ENST00000516913 RSPH10B2B2RC85 870 aa9.6□□□□□ -0.87
SCARNA20.3-201ENST00000516913 H3BRB1 525 aa9.6□□□□□ -0.87
SCARNA20.3-201ENST00000516913 GCOM1H8Y6P7 765 aaPredicted RBP9.6□□□□□ -0.87
SCARNA20.3-201ENST00000516913 SGSM2O43147 1006 aa9.6□□□□□ -0.87
SCARNA20.3-201ENST00000516913 RSPH10BP0C881 870 aa9.6□□□□□ -0.87
SCARNA20.3-201ENST00000516913 POLR2MP0CAP2 368 aa9.6□□□□□ -0.87
SCARNA20.3-201ENST00000516913 ITGB5P18084 799 aa9.6□□□□□ -0.87
SCARNA20.3-201ENST00000516913 GTF2F1P35269 517 aaKnown RBP eCLIP9.6□□□□□ -0.87
SCARNA20.3-201ENST00000516913 POTEBQ6S5H4 581 aa9.6□□□□□ -0.87
SCARNA20.3-201ENST00000516913 CYP2W1Q8TAV3 490 aa9.6□□□□□ -0.87
SCARNA20.3-201ENST00000516913 LMBR1Q8WVP7 490 aa9.6□□□□□ -0.87
SCARNA20.3-201ENST00000516913 MAP4K1Q92918 833 aa9.6□□□□□ -0.87
SCARNA20.3-201ENST00000516913 ATP6V0A1Q93050 837 aa9.6□□□□□ -0.87
SCARNA20.3-201ENST00000516913 TOP1MTQ969P6 601 aa9.6□□□□□ -0.87
SCARNA20.3-201ENST00000516913 TGS1Q96RS0 853 aaKnown RBP9.6□□□□□ -0.87
SCARNA20.3-201ENST00000516913 UBAC1Q9BSL1 405 aa9.6□□□□□ -0.87
SCARNA20.3-201ENST00000516913 TUT1Q9H6E5 874 aaKnown RBP9.6□□□□□ -0.87
SCARNA20.3-201ENST00000516913 UBE2ZQ9H832 354 aaPredicted RBP9.6□□□□□ -0.87
SCARNA20.3-201ENST00000516913 AGO3Q9H9G7 860 aaKnown RBP9.6□□□□□ -0.87
SCARNA20.3-201ENST00000516913 CACNA1HO95180 2353 aa9.6□□□□□ -0.87
SCARNA20.3-201ENST00000516913 VPS13AQ96RL7 3174 aa9.6□□□□□ -0.87
SCARNA20.3-201ENST00000516913 CFAP54Q96N23 3096 aa9.59□□□□□ -0.87
SCARNA20.3-201ENST00000516913 ZFHX2Q9C0A1 2572 aaPredicted RBP9.59□□□□□ -0.87
SCARNA20.3-201ENST00000516913 MYH7BA7E2Y1 1941 aa9.59□□□□□ -0.87
SCARNA20.3-201ENST00000516913 H3BQ06 376 aaPredicted RBP9.59□□□□□ -0.87
SCARNA20.3-201ENST00000516913 IFIT3O14879 490 aaKnown RBP9.59□□□□□ -0.87
SCARNA20.3-201ENST00000516913 GTPBP6O43824 516 aaPredicted RBP9.59□□□□□ -0.87
SCARNA20.3-201ENST00000516913 KCNA2P16389 499 aa9.59□□□□□ -0.87
SCARNA20.3-201ENST00000516913 KCNJ6P48051 423 aa9.59□□□□□ -0.87
SCARNA20.3-201ENST00000516913 MFAP1P55081 439 aaKnown RBP9.59□□□□□ -0.87
SCARNA20.3-201ENST00000516913 SP4Q02446 784 aa9.59□□□□□ -0.87
SCARNA20.3-201ENST00000516913 MGAT3Q09327 533 aa9.59□□□□□ -0.87
SCARNA20.3-201ENST00000516913 IKBKEQ14164 716 aa9.59□□□□□ -0.87
SCARNA20.3-201ENST00000516913 LPIN1Q14693 890 aa9.59□□□□□ -0.87
SCARNA20.3-201ENST00000516913 EPC2Q52LR7 807 aa9.59□□□□□ -0.87
SCARNA20.3-201ENST00000516913 CCDC178Q5BJE1 867 aa9.59□□□□□ -0.87
SCARNA20.3-201ENST00000516913 FAM26DQ5JW98 314 aa9.59□□□□□ -0.87
SCARNA20.3-201ENST00000516913 FAM178BQ8IXR5 827 aa9.59□□□□□ -0.87
SCARNA20.3-201ENST00000516913 MYOCDQ8IZQ8 938 aa9.59□□□□□ -0.87
SCARNA20.3-201ENST00000516913 NEK9Q8TD19 979 aa9.59□□□□□ -0.87
SCARNA20.3-201ENST00000516913 ZBED2Q9BTP6 218 aa9.59□□□□□ -0.87
SCARNA20.3-201ENST00000516913 LRRC2Q9BYS8 371 aa9.59□□□□□ -0.87
SCARNA20.3-201ENST00000516913 LSG1Q9H089 658 aaKnown RBP9.59□□□□□ -0.87
SCARNA20.3-201ENST00000516913 EHMT1Q9H9B1 1298 aa9.59□□□□□ -0.87
SCARNA20.3-201ENST00000516913 COG5Q9UP83 839 aa9.59□□□□□ -0.87
SCARNA20.3-201ENST00000516913 ZDBF2Q9HCK1 2354 aa9.59□□□□□ -0.87
SCARNA20.3-201ENST00000516913 DOCK5Q9H7D0 1870 aa9.58□□□□□ -0.88
SCARNA20.3-201ENST00000516913 C17orf102A2RUQ5 167 aa9.58□□□□□ -0.88
SCARNA20.3-201ENST00000516913 GRXCR2A6NFK2 248 aa9.58□□□□□ -0.88
SCARNA20.3-201ENST00000516913 KIF28PB7ZC32 967 aa9.58□□□□□ -0.88
SCARNA20.3-201ENST00000516913 PI4K2BG5E9Z4 385 aa9.58□□□□□ -0.88
SCARNA20.3-201ENST00000516913 GRM6O15303 877 aa9.58□□□□□ -0.88
SCARNA20.3-201ENST00000516913 UPP2O95045 317 aa9.58□□□□□ -0.88
SCARNA20.3-201ENST00000516913 TGFB3P10600 412 aa9.58□□□□□ -0.88
SCARNA20.3-201ENST00000516913 KCNA5P22460 613 aa9.58□□□□□ -0.88
SCARNA20.3-201ENST00000516913 DNAJB1P25685 340 aa9.58□□□□□ -0.88
SCARNA20.3-201ENST00000516913 CCND2P30279 289 aa9.58□□□□□ -0.88
SCARNA20.3-201ENST00000516913 PLA2G5P39877 138 aa9.58□□□□□ -0.88
SCARNA20.3-201ENST00000516913 GATMP50440 423 aa9.58□□□□□ -0.88
SCARNA20.3-201ENST00000516913 FUT2Q10981 343 aa9.58□□□□□ -0.88
SCARNA20.3-201ENST00000516913 UBE2SQ16763 222 aa9.58□□□□□ -0.88
SCARNA20.3-201ENST00000516913 LEXMQ3ZCV2 418 aa9.58□□□□□ -0.88
SCARNA20.3-201ENST00000516913 TCEAL5Q5H9L2 206 aa9.58□□□□□ -0.88
SCARNA20.3-201ENST00000516913 UTP14CQ5TAP6 766 aaKnown RBP9.58□□□□□ -0.88
SCARNA20.3-201ENST00000516913 METTL7BQ6UX53 244 aa9.58□□□□□ -0.88
SCARNA20.3-201ENST00000516913 CNNM2Q9H8M5 875 aa9.58□□□□□ -0.88
SCARNA20.3-201ENST00000516913 MLXIPQ9HAP2 919 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 141.5 ms