RNA–Protein interactions for RNA: ENST00000516330.1

SCARNA18.1-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 83 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18.1-201ENST00000516330 GALNT17Q6IS24 598 aa6.86□□□□□ -1.31
SCARNA18.1-201ENST00000516330 REXO1Q8N1G1 1221 aaKnown RBP6.86□□□□□ -1.31
SCARNA18.1-201ENST00000516330 KAT2BQ92831 832 aa6.86□□□□□ -1.31
SCARNA18.1-201ENST00000516330 GPKOWQ92917 476 aaPredicted RBP eCLIP6.86□□□□□ -1.31
SCARNA18.1-201ENST00000516330 TCEANC2Q96MN5 208 aa6.86□□□□□ -1.31
SCARNA18.1-201ENST00000516330 SLC9A7Q96T83 725 aa6.86□□□□□ -1.31
SCARNA18.1-201ENST00000516330 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.86□□□□□ -1.31
SCARNA18.1-201ENST00000516330 C16orf70Q9BSU1 422 aa6.86□□□□□ -1.31
SCARNA18.1-201ENST00000516330 C6orf50Q9HD87 102 aa6.86□□□□□ -1.31
SCARNA18.1-201ENST00000516330 FAM217BQ9NTX9 383 aaPredicted RBP6.86□□□□□ -1.31
SCARNA18.1-201ENST00000516330 TCEAL9Q9UHQ7 104 aa6.86□□□□□ -1.31
SCARNA18.1-201ENST00000516330 PCDHA6Q9UN73 950 aa6.86□□□□□ -1.31
SCARNA18.1-201ENST00000516330 STXBP5LQ9Y2K9 1186 aa6.86□□□□□ -1.31
SCARNA18.1-201ENST00000516330 PCDHA8Q9Y5H6 950 aa6.86□□□□□ -1.31
SCARNA18.1-201ENST00000516330 UBIAD1Q9Y5Z9 338 aa6.86□□□□□ -1.31
SCARNA18.1-201ENST00000516330 CDH23Q9H251 3354 aa6.85□□□□□ -1.31
SCARNA18.1-201ENST00000516330 NRCAMQ92823 1304 aa6.85□□□□□ -1.31
SCARNA18.1-201ENST00000516330 H3BRB1 525 aa6.85□□□□□ -1.31
SCARNA18.1-201ENST00000516330 CPLX1O14810 134 aa6.85□□□□□ -1.31
SCARNA18.1-201ENST00000516330 DEXIO95424 95 aa6.85□□□□□ -1.31
SCARNA18.1-201ENST00000516330 CYP3A4P08684 503 aa6.85□□□□□ -1.31
SCARNA18.1-201ENST00000516330 IQCF3P0C7M6 154 aa6.85□□□□□ -1.31
SCARNA18.1-201ENST00000516330 ZNF286BP0CG31 522 aa6.85□□□□□ -1.31
SCARNA18.1-201ENST00000516330 XBP1P17861 261 aa6.85□□□□□ -1.31
SCARNA18.1-201ENST00000516330 PTGS1P23219 599 aa6.85□□□□□ -1.31
SCARNA18.1-201ENST00000516330 APOBRQ0VD83 1088 aa6.85□□□□□ -1.31
SCARNA18.1-201ENST00000516330 NTRK3Q16288 839 aa6.85□□□□□ -1.31
SCARNA18.1-201ENST00000516330 PTGISQ16647 500 aa6.85□□□□□ -1.31
SCARNA18.1-201ENST00000516330 CEP55Q53EZ4 464 aa6.85□□□□□ -1.31
SCARNA18.1-201ENST00000516330 TYW1BQ6NUM6 668 aa6.85□□□□□ -1.31
SCARNA18.1-201ENST00000516330 TAF2Q6P1X5 1199 aa6.85□□□□□ -1.31
SCARNA18.1-201ENST00000516330 MOXD1Q6UVY6 613 aa6.85□□□□□ -1.31
SCARNA18.1-201ENST00000516330 LRRC8DQ7L1W4 858 aa6.85□□□□□ -1.31
SCARNA18.1-201ENST00000516330 RPAINQ86UA6 219 aa6.85□□□□□ -1.31
SCARNA18.1-201ENST00000516330 CMTR1Q8N1G2 835 aaKnown RBP6.85□□□□□ -1.31
SCARNA18.1-201ENST00000516330 DEFB123Q8N688 67 aa6.85□□□□□ -1.31
SCARNA18.1-201ENST00000516330 RETREG2Q8NC44 543 aa6.85□□□□□ -1.31
SCARNA18.1-201ENST00000516330 DAGLBQ8NCG7 672 aa6.85□□□□□ -1.31
SCARNA18.1-201ENST00000516330 PHOSPHO2Q8TCD6 241 aa6.85□□□□□ -1.31
SCARNA18.1-201ENST00000516330 CRYGNQ8WXF5 182 aa6.85□□□□□ -1.31
SCARNA18.1-201ENST00000516330 PIBF1Q8WXW3 757 aa6.85□□□□□ -1.31
SCARNA18.1-201ENST00000516330 GPR20Q99678 358 aa6.85□□□□□ -1.31
SCARNA18.1-201ENST00000516330 MXRA8Q9BRK3 442 aa6.85□□□□□ -1.31
SCARNA18.1-201ENST00000516330 SDF4Q9BRK5 362 aa6.85□□□□□ -1.31
SCARNA18.1-201ENST00000516330 TRPV6Q9H1D0 765 aa6.85□□□□□ -1.31
SCARNA18.1-201ENST00000516330 TUT1Q9H6E5 874 aaKnown RBP6.85□□□□□ -1.31
SCARNA18.1-201ENST00000516330 JPH1Q9HDC5 661 aaPredicted RBP6.85□□□□□ -1.31
SCARNA18.1-201ENST00000516330 JADE2Q9NQC1 790 aa6.85□□□□□ -1.31
SCARNA18.1-201ENST00000516330 TRMT13Q9NUP7 481 aaKnown RBP6.85□□□□□ -1.31
SCARNA18.1-201ENST00000516330 ERAP1Q9NZ08 941 aa6.85□□□□□ -1.31
SCARNA18.1-201ENST00000516330 MYH7BA7E2Y1 1941 aa6.85□□□□□ -1.31
SCARNA18.1-201ENST00000516330 UMODL1Q5DID0 1318 aa6.84□□□□□ -1.31
SCARNA18.1-201ENST00000516330 GBF1Q92538 1859 aa6.84□□□□□ -1.31
SCARNA18.1-201ENST00000516330 DOCK5Q9H7D0 1870 aa6.84□□□□□ -1.31
SCARNA18.1-201ENST00000516330 C17orf102A2RUQ5 167 aa6.84□□□□□ -1.31
SCARNA18.1-201ENST00000516330 SMCO2A6NFE2 343 aa6.84□□□□□ -1.31
SCARNA18.1-201ENST00000516330 FGBP02675 491 aa6.84□□□□□ -1.31
SCARNA18.1-201ENST00000516330 CXCL10P02778 98 aa6.84□□□□□ -1.31
SCARNA18.1-201ENST00000516330 SELPP16109 830 aa6.84□□□□□ -1.31
SCARNA18.1-201ENST00000516330 ITGB5P18084 799 aa6.84□□□□□ -1.31
SCARNA18.1-201ENST00000516330 PDIA3P30101 505 aaKnown RBP6.84□□□□□ -1.31
SCARNA18.1-201ENST00000516330 CYP2C18P33260 490 aa6.84□□□□□ -1.31
SCARNA18.1-201ENST00000516330 ADD1P35611 737 aaKnown RBP6.84□□□□□ -1.31
SCARNA18.1-201ENST00000516330 TCF7P36402 384 aaPredicted RBP6.84□□□□□ -1.31
SCARNA18.1-201ENST00000516330 EPHB4P54760 987 aa6.84□□□□□ -1.31
SCARNA18.1-201ENST00000516330 ARHGAP4P98171 946 aa6.84□□□□□ -1.31
SCARNA18.1-201ENST00000516330 SP2Q02086 613 aa6.84□□□□□ -1.31
SCARNA18.1-201ENST00000516330 TOB2Q14106 344 aaPredicted RBP6.84□□□□□ -1.31
SCARNA18.1-201ENST00000516330 UBE2SQ16763 222 aa6.84□□□□□ -1.31
SCARNA18.1-201ENST00000516330 GDF6Q6KF10 455 aaPredicted RBP6.84□□□□□ -1.31
SCARNA18.1-201ENST00000516330 CNKSR3Q6P9H4 555 aa6.84□□□□□ -1.31
SCARNA18.1-201ENST00000516330 CYFIP1Q7L576 1253 aa6.84□□□□□ -1.31
SCARNA18.1-201ENST00000516330 SERINC5Q86VE9 423 aa6.84□□□□□ -1.31
SCARNA18.1-201ENST00000516330 RAB11FIP4Q86YS3 637 aa6.84□□□□□ -1.31
SCARNA18.1-201ENST00000516330 SMAP1Q8IYB5 467 aaPredicted RBP6.84□□□□□ -1.31
SCARNA18.1-201ENST00000516330 CCDC82Q8N4S0 544 aa6.84□□□□□ -1.31
SCARNA18.1-201ENST00000516330 SEPT1Q8WYJ6 367 aa6.84□□□□□ -1.31
SCARNA18.1-201ENST00000516330 APBB2Q92870 758 aa6.84□□□□□ -1.31
SCARNA18.1-201ENST00000516330 SMARCAD1Q9H4L7 1026 aa6.84□□□□□ -1.31
SCARNA18.1-201ENST00000516330 KCNH7Q9NS40 1196 aa6.84□□□□□ -1.31
SCARNA18.1-201ENST00000516330 MTMR10Q9NXD2 777 aa6.84□□□□□ -1.31
SCARNA18.1-201ENST00000516330 HDAC6Q9UBN7 1215 aa6.84□□□□□ -1.31
SCARNA18.1-201ENST00000516330 SLC9A2Q9UBY0 812 aa6.84□□□□□ -1.31
SCARNA18.1-201ENST00000516330 NAP1L2Q9ULW6 460 aaPredicted RBP6.84□□□□□ -1.31
SCARNA18.1-201ENST00000516330 V9GY48 417 aaPredicted RBP6.84□□□□□ -1.31
SCARNA18.1-201ENST00000516330 SIP14410 1827 aa6.84□□□□□ -1.31
SCARNA18.1-201ENST00000516330 MICAL3Q7RTP6 2002 aa6.84□□□□□ -1.31
SCARNA18.1-201ENST00000516330 COL1A2P08123 1366 aa6.83□□□□□ -1.32
SCARNA18.1-201ENST00000516330 MEIS1O00470 390 aa6.83□□□□□ -1.32
SCARNA18.1-201ENST00000516330 LGR5O75473 907 aa6.83□□□□□ -1.32
SCARNA18.1-201ENST00000516330 SMIM10L2AP0DMW4 78 aa6.83□□□□□ -1.32
SCARNA18.1-201ENST00000516330 SMIM10L2BP0DMW5 78 aa6.83□□□□□ -1.32
SCARNA18.1-201ENST00000516330 CYP2C9P11712 490 aa6.83□□□□□ -1.32
SCARNA18.1-201ENST00000516330 CKBP12277 381 aa6.83□□□□□ -1.32
SCARNA18.1-201ENST00000516330 CIITAP33076 1130 aa6.83□□□□□ -1.32
SCARNA18.1-201ENST00000516330 CCL23P55773 120 aa6.83□□□□□ -1.32
SCARNA18.1-201ENST00000516330 ADAM17P78536 824 aa6.83□□□□□ -1.32
SCARNA18.1-201ENST00000516330 KRT76Q01546 638 aa6.83□□□□□ -1.32
SCARNA18.1-201ENST00000516330 PKN1Q16512 942 aa6.83□□□□□ -1.32
SCARNA18.1-201ENST00000516330 ZNF365Q70YC5 407 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms