RNA–Protein interactions for RNA: ENST00000515791.1

SFXN1-212, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-212ENST00000515791 KLF18A0A0U1RQI7 1052 aa20.32■□□□□ 0.84
SFXN1-212ENST00000515791 H3BRB1 525 aa20.32■□□□□ 0.84
SFXN1-212ENST00000515791 CXCL10P02778 98 aa20.32■□□□□ 0.84
SFXN1-212ENST00000515791 HMGB1P09429 215 aaKnown RBP20.32■□□□□ 0.84
SFXN1-212ENST00000515791 PTK7Q13308 1070 aa20.32■□□□□ 0.84
SFXN1-212ENST00000515791 TCTN1Q2MV58 587 aa20.32■□□□□ 0.84
SFXN1-212ENST00000515791 TUT1Q9H6E5 874 aaKnown RBP20.32■□□□□ 0.84
SFXN1-212ENST00000515791 PCDHA6Q9UN73 950 aa20.32■□□□□ 0.84
SFXN1-212ENST00000515791 PCDHA8Q9Y5H6 950 aa20.32■□□□□ 0.84
SFXN1-212ENST00000515791 NBNO60934 754 aa20.31■□□□□ 0.84
SFXN1-212ENST00000515791 SELPP16109 830 aa20.31■□□□□ 0.84
SFXN1-212ENST00000515791 KCNA2P16389 499 aa20.31■□□□□ 0.84
SFXN1-212ENST00000515791 RABGGTBP53611 331 aa20.31■□□□□ 0.84
SFXN1-212ENST00000515791 RAB30Q15771 203 aa20.31■□□□□ 0.84
SFXN1-212ENST00000515791 LRRC8DQ7L1W4 858 aa20.31■□□□□ 0.84
SFXN1-212ENST00000515791 HEATR3Q7Z4Q2 680 aa20.31■□□□□ 0.84
SFXN1-212ENST00000515791 CCDC155Q8N6L0 562 aa20.31■□□□□ 0.84
SFXN1-212ENST00000515791 GPRASP2Q96D09 838 aa20.31■□□□□ 0.84
SFXN1-212ENST00000515791 NKX2-4Q9H2Z4 354 aa20.31■□□□□ 0.84
SFXN1-212ENST00000515791 V9GY48 417 aaPredicted RBP20.31■□□□□ 0.84
SFXN1-212ENST00000515791 NID2Q14112 1375 aa20.31■□□□□ 0.84
SFXN1-212ENST00000515791 SPTBN5Q9NRC6 3674 aaKnown RBP20.31■□□□□ 0.84
SFXN1-212ENST00000515791 REV3LO60673 3130 aa20.3■□□□□ 0.84
SFXN1-212ENST00000515791 STXBP3O00186 592 aa20.3■□□□□ 0.84
SFXN1-212ENST00000515791 MYOGP15173 224 aa20.3■□□□□ 0.84
SFXN1-212ENST00000515791 FOSL2P15408 326 aa20.3■□□□□ 0.84
SFXN1-212ENST00000515791 ADD1P35611 737 aaKnown RBP20.3■□□□□ 0.84
SFXN1-212ENST00000515791 MBTPS1Q14703 1052 aa20.3■□□□□ 0.84
SFXN1-212ENST00000515791 NLRX1Q86UT6 975 aa20.3■□□□□ 0.84
SFXN1-212ENST00000515791 SERINC5Q86VE9 423 aa20.3■□□□□ 0.84
SFXN1-212ENST00000515791 MAFAQ8NHW3 353 aaPredicted RBP20.3■□□□□ 0.84
SFXN1-212ENST00000515791 USP26Q9BXU7 913 aa20.3■□□□□ 0.84
SFXN1-212ENST00000515791 RNPEPQ9H4A4 650 aa20.3■□□□□ 0.84
SFXN1-212ENST00000515791 RIC8AQ9NPQ8 531 aa20.3■□□□□ 0.84
SFXN1-212ENST00000515791 MSRAQ9UJ68 235 aa20.3■□□□□ 0.84
SFXN1-212ENST00000515791 TRANK1O15050 2925 aa20.3■□□□□ 0.84
SFXN1-212ENST00000515791 GOLGA8AA7E2F4 631 aa20.29■□□□□ 0.84
SFXN1-212ENST00000515791 GOLGA8BA8MQT2 603 aa20.29■□□□□ 0.84
SFXN1-212ENST00000515791 ZBBXA8MT70 800 aa20.29■□□□□ 0.84
SFXN1-212ENST00000515791 SMIM10L2AP0DMW4 78 aa20.29■□□□□ 0.84
SFXN1-212ENST00000515791 SMIM10L2BP0DMW5 78 aa20.29■□□□□ 0.84
SFXN1-212ENST00000515791 ATP2A2P16615 1042 aaKnown RBP20.29■□□□□ 0.84
SFXN1-212ENST00000515791 CLK2P49760 499 aaKnown RBP20.29■□□□□ 0.84
SFXN1-212ENST00000515791 ADAM17P78536 824 aa20.29■□□□□ 0.84
SFXN1-212ENST00000515791 APOBRQ0VD83 1088 aa20.29■□□□□ 0.84
SFXN1-212ENST00000515791 ZNF618Q5T7W0 954 aa20.29■□□□□ 0.84
SFXN1-212ENST00000515791 PPP1R18Q6NYC8 613 aa20.29■□□□□ 0.84
SFXN1-212ENST00000515791 Q6ZUG5 572 aa20.29■□□□□ 0.84
SFXN1-212ENST00000515791 TRIM50Q86XT4 487 aa20.29■□□□□ 0.84
SFXN1-212ENST00000515791 TEX2Q8IWB9 1127 aa20.29■□□□□ 0.84
SFXN1-212ENST00000515791 JAKMIP1Q96N16 626 aaKnown RBP20.29■□□□□ 0.84
SFXN1-212ENST00000515791 BARHL2Q9NY43 387 aa20.29■□□□□ 0.84
SFXN1-212ENST00000515791 PCDHA11Q9Y5I1 949 aa20.29■□□□□ 0.84
SFXN1-212ENST00000515791 ACTN1P12814 892 aa20.28■□□□□ 0.84
SFXN1-212ENST00000515791 RPS6KB1P23443 525 aa20.28■□□□□ 0.84
SFXN1-212ENST00000515791 ADGRE1Q14246 886 aa20.28■□□□□ 0.84
SFXN1-212ENST00000515791 PHOSPHO2Q8TCD6 241 aa20.28■□□□□ 0.84
SFXN1-212ENST00000515791 JADE2Q9NQC1 790 aa20.28■□□□□ 0.84
SFXN1-212ENST00000515791 GSTTP1A0A1W2PQM5 241 aa20.27■□□□□ 0.84
SFXN1-212ENST00000515791 SPDYE3A6NKU9 549 aa20.27■□□□□ 0.84
SFXN1-212ENST00000515791 hCG_1984214I3L0E3 225 aa20.27■□□□□ 0.84
SFXN1-212ENST00000515791 NOP56O00567 594 aaKnown RBP20.27■□□□□ 0.84
SFXN1-212ENST00000515791 ADAMTS3O15072 1205 aa20.27■□□□□ 0.84
SFXN1-212ENST00000515791 TREHO43280 583 aa20.27■□□□□ 0.84
SFXN1-212ENST00000515791 BAIAP3O94812 1187 aa20.27■□□□□ 0.84
SFXN1-212ENST00000515791 PARNO95453 639 aaKnown RBP20.27■□□□□ 0.84
SFXN1-212ENST00000515791 NAPAP54920 295 aa20.27■□□□□ 0.84
SFXN1-212ENST00000515791 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.27■□□□□ 0.84
SFXN1-212ENST00000515791 ZNF713Q8N859 430 aaPredicted RBP20.27■□□□□ 0.84
SFXN1-212ENST00000515791 CYP2W1Q8TAV3 490 aa20.27■□□□□ 0.84
SFXN1-212ENST00000515791 BRF1Q92994 677 aa20.27■□□□□ 0.84
SFXN1-212ENST00000515791 SLC9A7Q96T83 725 aa20.27■□□□□ 0.84
SFXN1-212ENST00000515791 FTOQ9C0B1 505 aaKnown RBP eCLIP20.27■□□□□ 0.84
SFXN1-212ENST00000515791 PRDM12Q9H4Q4 367 aa20.27■□□□□ 0.84
SFXN1-212ENST00000515791 C17orf102A2RUQ5 167 aa20.26■□□□□ 0.83
SFXN1-212ENST00000515791 EPB41L2O43491 1005 aaKnown RBP20.26■□□□□ 0.83
SFXN1-212ENST00000515791 ARHGEF15O94989 841 aa20.26■□□□□ 0.83
SFXN1-212ENST00000515791 EVCP57679 992 aa20.26■□□□□ 0.83
SFXN1-212ENST00000515791 MKRN4PQ13434 485 aaPredicted RBP20.26■□□□□ 0.83
SFXN1-212ENST00000515791 NTRK3Q16288 839 aa20.26■□□□□ 0.83
SFXN1-212ENST00000515791 PKN1Q16512 942 aa20.26■□□□□ 0.83
SFXN1-212ENST00000515791 PFKFB3Q16875 520 aaPredicted RBP20.26■□□□□ 0.83
SFXN1-212ENST00000515791 BLOC1S2Q6QNY1 142 aa20.26■□□□□ 0.83
SFXN1-212ENST00000515791 USP38Q8NB14 1042 aa20.26■□□□□ 0.83
SFXN1-212ENST00000515791 GIMAP8Q8ND71 665 aaPredicted RBP20.26■□□□□ 0.83
SFXN1-212ENST00000515791 CDHR1Q96JP9 859 aa20.26■□□□□ 0.83
SFXN1-212ENST00000515791 PGBD1Q96JS3 809 aa20.26■□□□□ 0.83
SFXN1-212ENST00000515791 SLC28A3Q9HAS3 691 aa20.26■□□□□ 0.83
SFXN1-212ENST00000515791 SMCO2A6NFE2 343 aa20.25■□□□□ 0.83
SFXN1-212ENST00000515791 MAFGO15525 162 aa20.25■□□□□ 0.83
SFXN1-212ENST00000515791 REC8O95072 547 aa20.25■□□□□ 0.83
SFXN1-212ENST00000515791 TCF7P36402 384 aaPredicted RBP20.25■□□□□ 0.83
SFXN1-212ENST00000515791 METAP2P50579 478 aaKnown RBP eCLIP20.25■□□□□ 0.83
SFXN1-212ENST00000515791 WDR5P61964 334 aaKnown RBP20.25■□□□□ 0.83
SFXN1-212ENST00000515791 MTMR1Q13613 665 aa20.25■□□□□ 0.83
SFXN1-212ENST00000515791 CNKSR3Q6P9H4 555 aa20.25■□□□□ 0.83
SFXN1-212ENST00000515791 HERC6Q8IVU3 1022 aa20.25■□□□□ 0.83
SFXN1-212ENST00000515791 CRYGNQ8WXF5 182 aa20.25■□□□□ 0.83
SFXN1-212ENST00000515791 ATP6V0A1Q93050 837 aa20.25■□□□□ 0.83
SFXN1-212ENST00000515791 MXRA8Q9BRK3 442 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms