RNA–Protein interactions for RNA: ENST00000515546.1

HMGCLL1-209, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 4

Gene HMGCLL1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-209ENST00000515546 NCOA5Q9HCD5 579 aaKnown RBP16.98■□□□□ 0.31
HMGCLL1-209ENST00000515546 JADE2Q9NQC1 790 aa16.98■□□□□ 0.31
HMGCLL1-209ENST00000515546 HDAC6Q9UBN7 1215 aa16.98■□□□□ 0.31
HMGCLL1-209ENST00000515546 MYH7BA7E2Y1 1941 aa16.98■□□□□ 0.31
HMGCLL1-209ENST00000515546 CHD9Q3L8U1 2897 aa16.97■□□□□ 0.31
HMGCLL1-209ENST00000515546 MTMR1Q13613 665 aa16.97■□□□□ 0.31
HMGCLL1-209ENST00000515546 PTGISQ16647 500 aa16.97■□□□□ 0.31
HMGCLL1-209ENST00000515546 ZNF365Q70YC5 407 aa16.97■□□□□ 0.31
HMGCLL1-209ENST00000515546 C7orf31Q8N865 590 aa16.97■□□□□ 0.31
HMGCLL1-209ENST00000515546 CRYGNQ8WXF5 182 aa16.97■□□□□ 0.31
HMGCLL1-209ENST00000515546 DHX38Q92620 1227 aaKnown RBP16.97■□□□□ 0.31
HMGCLL1-209ENST00000515546 TMEM260Q9NX78 707 aa16.97■□□□□ 0.31
HMGCLL1-209ENST00000515546 TELO2Q9Y4R8 837 aa16.97■□□□□ 0.31
HMGCLL1-209ENST00000515546 CDH23Q9H251 3354 aa16.96■□□□□ 0.31
HMGCLL1-209ENST00000515546 NOP56O00567 594 aaKnown RBP16.96■□□□□ 0.31
HMGCLL1-209ENST00000515546 MAFGO15525 162 aa16.96■□□□□ 0.31
HMGCLL1-209ENST00000515546 ATP9AO75110 1047 aa16.96■□□□□ 0.31
HMGCLL1-209ENST00000515546 PFKMP08237 780 aa16.96■□□□□ 0.31
HMGCLL1-209ENST00000515546 ACRP10323 421 aa16.96■□□□□ 0.31
HMGCLL1-209ENST00000515546 RFC2P35250 354 aa16.96■□□□□ 0.31
HMGCLL1-209ENST00000515546 CHMP4BP1P59074 171 aa16.96■□□□□ 0.31
HMGCLL1-209ENST00000515546 CCT2P78371 535 aaKnown RBP16.96■□□□□ 0.31
HMGCLL1-209ENST00000515546 Q7L0L9 218 aa16.96■□□□□ 0.31
HMGCLL1-209ENST00000515546 DEFB123Q8N688 67 aa16.96■□□□□ 0.31
HMGCLL1-209ENST00000515546 CAGE1Q8TC20 777 aa16.96■□□□□ 0.31
HMGCLL1-209ENST00000515546 CCDC12Q8WUD4 166 aaPredicted RBP16.96■□□□□ 0.31
HMGCLL1-209ENST00000515546 HERVK_113Q902F9 699 aa16.96■□□□□ 0.31
HMGCLL1-209ENST00000515546 SCLYQ96I15 445 aa16.96■□□□□ 0.31
HMGCLL1-209ENST00000515546 PGBD1Q96JS3 809 aa16.96■□□□□ 0.31
HMGCLL1-209ENST00000515546 ALG1Q9BT22 464 aa16.96■□□□□ 0.31
HMGCLL1-209ENST00000515546 PDRG1Q9NUG6 133 aa16.96■□□□□ 0.31
HMGCLL1-209ENST00000515546 NOD1Q9Y239 953 aa16.96■□□□□ 0.31
HMGCLL1-209ENST00000515546 DOCK5Q9H7D0 1870 aa16.96■□□□□ 0.31
HMGCLL1-209ENST00000515546 H3BRB1 525 aa16.95■□□□□ 0.3
HMGCLL1-209ENST00000515546 ADAMTS3O15072 1205 aa16.95■□□□□ 0.3
HMGCLL1-209ENST00000515546 BFSP2Q13515 415 aa16.95■□□□□ 0.3
HMGCLL1-209ENST00000515546 HIC1Q14526 733 aa16.95■□□□□ 0.3
HMGCLL1-209ENST00000515546 TRIM71Q2Q1W2 868 aaKnown RBP16.95■□□□□ 0.3
HMGCLL1-209ENST00000515546 MCTP2Q6DN12 878 aa16.95■□□□□ 0.3
HMGCLL1-209ENST00000515546 CCDC155Q8N6L0 562 aa16.95■□□□□ 0.3
HMGCLL1-209ENST00000515546 AFAP1L1Q8TED9 768 aa16.95■□□□□ 0.3
HMGCLL1-209ENST00000515546 MXRA8Q9BRK3 442 aa16.95■□□□□ 0.3
HMGCLL1-209ENST00000515546 SLC26A6Q9BXS9 759 aa16.95■□□□□ 0.3
HMGCLL1-209ENST00000515546 TUT1Q9H6E5 874 aaKnown RBP16.95■□□□□ 0.3
HMGCLL1-209ENST00000515546 MTMR10Q9NXD2 777 aa16.95■□□□□ 0.3
HMGCLL1-209ENST00000515546 EIF5BO60841 1220 aaKnown RBP16.94■□□□□ 0.3
HMGCLL1-209ENST00000515546 IQCF3P0C7M6 154 aa16.94■□□□□ 0.3
HMGCLL1-209ENST00000515546 ARHGAP4P98171 946 aa16.94■□□□□ 0.3
HMGCLL1-209ENST00000515546 AKAP17AQ02040 695 aaKnown RBP16.94■□□□□ 0.3
HMGCLL1-209ENST00000515546 PTK7Q13308 1070 aa16.94■□□□□ 0.3
HMGCLL1-209ENST00000515546 CEP55Q53EZ4 464 aa16.94■□□□□ 0.3
HMGCLL1-209ENST00000515546 NIPA1Q7RTP0 329 aa16.94■□□□□ 0.3
HMGCLL1-209ENST00000515546 TRIM50Q86XT4 487 aa16.94■□□□□ 0.3
HMGCLL1-209ENST00000515546 RPUSD2Q8IZ73 545 aaKnown RBP16.94■□□□□ 0.3
HMGCLL1-209ENST00000515546 REXO1Q8N1G1 1221 aaKnown RBP16.94■□□□□ 0.3
HMGCLL1-209ENST00000515546 CCDC148Q8NFR7 591 aa16.94■□□□□ 0.3
HMGCLL1-209ENST00000515546 CYP2W1Q8TAV3 490 aa16.94■□□□□ 0.3
HMGCLL1-209ENST00000515546 C6orf50Q9HD87 102 aa16.94■□□□□ 0.3
HMGCLL1-209ENST00000515546 KCNH7Q9NS40 1196 aa16.94■□□□□ 0.3
HMGCLL1-209ENST00000515546 COL6A3P12111 3177 aa16.93■□□□□ 0.3
HMGCLL1-209ENST00000515546 TMEM265A0A087WTH1 108 aa16.93■□□□□ 0.3
HMGCLL1-209ENST00000515546 MEIS1O00470 390 aa16.93■□□□□ 0.3
HMGCLL1-209ENST00000515546 FGBP02675 491 aa16.93■□□□□ 0.3
HMGCLL1-209ENST00000515546 CYP3A4P08684 503 aa16.93■□□□□ 0.3
HMGCLL1-209ENST00000515546 SMIM10L2AP0DMW4 78 aa16.93■□□□□ 0.3
HMGCLL1-209ENST00000515546 SMIM10L2BP0DMW5 78 aa16.93■□□□□ 0.3
HMGCLL1-209ENST00000515546 GNA11P29992 359 aa16.93■□□□□ 0.3
HMGCLL1-209ENST00000515546 JAKMIP3Q5VZ66 844 aa16.93■□□□□ 0.3
HMGCLL1-209ENST00000515546 TRAF7Q6Q0C0 670 aa16.93■□□□□ 0.3
HMGCLL1-209ENST00000515546 SERINC5Q86VE9 423 aa16.93■□□□□ 0.3
HMGCLL1-209ENST00000515546 RETREG2Q8NC44 543 aa16.93■□□□□ 0.3
HMGCLL1-209ENST00000515546 WNT8BQ93098 351 aa16.93■□□□□ 0.3
HMGCLL1-209ENST00000515546 SH3GLB2Q9NR46 395 aa16.93■□□□□ 0.3
HMGCLL1-209ENST00000515546 CXXC1Q9P0U4 656 aaPredicted RBP16.93■□□□□ 0.3
HMGCLL1-209ENST00000515546 ZNF215Q9UL58 517 aaPredicted RBP16.93■□□□□ 0.3
HMGCLL1-209ENST00000515546 NFASCO94856 1347 aa16.93■□□□□ 0.3
HMGCLL1-209ENST00000515546 IGLV3-22A0A075B6J6 115 aa16.92■□□□□ 0.3
HMGCLL1-209ENST00000515546 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.92■□□□□ 0.3
HMGCLL1-209ENST00000515546 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.92■□□□□ 0.3
HMGCLL1-209ENST00000515546 GSTTP1A0A1W2PQM5 241 aa16.92■□□□□ 0.3
HMGCLL1-209ENST00000515546 PPFIA3O75145 1194 aa16.92■□□□□ 0.3
HMGCLL1-209ENST00000515546 SELPP16109 830 aa16.92■□□□□ 0.3
HMGCLL1-209ENST00000515546 TCF7P36402 384 aaPredicted RBP16.92■□□□□ 0.3
HMGCLL1-209ENST00000515546 ZNF200P98182 395 aaPredicted RBP16.92■□□□□ 0.3
HMGCLL1-209ENST00000515546 SP4Q02446 784 aa16.92■□□□□ 0.3
HMGCLL1-209ENST00000515546 ITGB3BPQ13352 177 aaPredicted RBP16.92■□□□□ 0.3
HMGCLL1-209ENST00000515546 LRRC8DQ7L1W4 858 aa16.92■□□□□ 0.3
HMGCLL1-209ENST00000515546 TRIM22Q8IYM9 498 aa16.92■□□□□ 0.3
HMGCLL1-209ENST00000515546 FAM177A1Q8N128 213 aaPredicted RBP16.92■□□□□ 0.3
HMGCLL1-209ENST00000515546 BICD2Q8TD16 824 aa16.92■□□□□ 0.3
HMGCLL1-209ENST00000515546 LARP6Q9BRS8 491 aaKnown RBP16.92■□□□□ 0.3
HMGCLL1-209ENST00000515546 MTIF3Q9H2K0 278 aaKnown RBP16.92■□□□□ 0.3
HMGCLL1-209ENST00000515546 AGO4Q9HCK5 861 aaKnown RBP16.92■□□□□ 0.3
HMGCLL1-209ENST00000515546 JPH1Q9HDC5 661 aaPredicted RBP16.92■□□□□ 0.3
HMGCLL1-209ENST00000515546 PKD2L1Q9P0L9 805 aa16.92■□□□□ 0.3
HMGCLL1-209ENST00000515546 VPS54Q9P1Q0 977 aa16.92■□□□□ 0.3
HMGCLL1-209ENST00000515546 SCN5AQ14524 2016 aa16.92■□□□□ 0.3
HMGCLL1-209ENST00000515546 EMSYQ7Z589 1322 aa16.92■□□□□ 0.3
HMGCLL1-209ENST00000515546 C17orf102A2RUQ5 167 aa16.91■□□□□ 0.3
HMGCLL1-209ENST00000515546 FAM86B1E9PN63 330 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms