RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 CCT6AP40227 531 aaKnown RBP11.41□□□□□ -0.58
SNF8-214ENST00000515174 MTMR2Q13614 643 aa11.41□□□□□ -0.58
SNF8-214ENST00000515174 COG2Q14746 738 aa11.41□□□□□ -0.58
SNF8-214ENST00000515174 B3GNT9Q6UX72 402 aa11.41□□□□□ -0.58
SNF8-214ENST00000515174 CATSPERGQ6ZRH7 1159 aa11.41□□□□□ -0.58
SNF8-214ENST00000515174 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.41□□□□□ -0.58
SNF8-214ENST00000515174 VSTM4Q8IW00 320 aa11.41□□□□□ -0.58
SNF8-214ENST00000515174 CCDC150Q8NCX0 1101 aa11.41□□□□□ -0.58
SNF8-214ENST00000515174 REPS2Q8NFH8 660 aa11.41□□□□□ -0.58
SNF8-214ENST00000515174 CLMNQ96JQ2 1002 aa11.41□□□□□ -0.58
SNF8-214ENST00000515174 RIT2Q99578 217 aa11.41□□□□□ -0.58
SNF8-214ENST00000515174 NUDT12Q9BQG2 462 aa11.41□□□□□ -0.58
SNF8-214ENST00000515174 MXRA8Q9BRK3 442 aa11.41□□□□□ -0.58
SNF8-214ENST00000515174 WDR11Q9BZH6 1224 aa11.41□□□□□ -0.58
SNF8-214ENST00000515174 KCNF1Q9H3M0 494 aa11.41□□□□□ -0.58
SNF8-214ENST00000515174 TUFT1Q9NNX1 390 aa11.41□□□□□ -0.58
SNF8-214ENST00000515174 HOXC10Q9NYD6 342 aa11.41□□□□□ -0.58
SNF8-214ENST00000515174 LIMA1Q9UHB6 759 aaKnown RBP11.41□□□□□ -0.58
SNF8-214ENST00000515174 VAV3Q9UKW4 847 aa11.41□□□□□ -0.58
SNF8-214ENST00000515174 ZHX2Q9Y6X8 837 aa11.41□□□□□ -0.58
SNF8-214ENST00000515174 LCTP09848 1927 aa11.41□□□□□ -0.58
SNF8-214ENST00000515174 TNRC18O15417 2968 aaPredicted RBP11.4□□□□□ -0.58
SNF8-214ENST00000515174 SYNRGQ9UMZ2 1314 aa11.4□□□□□ -0.58
SNF8-214ENST00000515174 MAFGO15525 162 aa11.4□□□□□ -0.58
SNF8-214ENST00000515174 PPP1R12BO60237 982 aaPredicted RBP11.4□□□□□ -0.58
SNF8-214ENST00000515174 FLOT1O75955 427 aa11.4□□□□□ -0.58
SNF8-214ENST00000515174 PTGS1P23219 599 aa11.4□□□□□ -0.58
SNF8-214ENST00000515174 CCNE1P24864 410 aa11.4□□□□□ -0.58
SNF8-214ENST00000515174 IREB2P48200 963 aaKnown RBP11.4□□□□□ -0.58
SNF8-214ENST00000515174 FKBP1BP68106 108 aa11.4□□□□□ -0.58
SNF8-214ENST00000515174 MCM6Q14566 821 aa11.4□□□□□ -0.58
SNF8-214ENST00000515174 PCNX4Q63HM2 1172 aa11.4□□□□□ -0.58
SNF8-214ENST00000515174 CENPPQ6IPU0 288 aa11.4□□□□□ -0.58
SNF8-214ENST00000515174 OTOP1Q7RTM1 612 aa11.4□□□□□ -0.58
SNF8-214ENST00000515174 FCHSD1Q86WN1 690 aa11.4□□□□□ -0.58
SNF8-214ENST00000515174 GUF1Q8N442 669 aaKnown RBP11.4□□□□□ -0.58
SNF8-214ENST00000515174 SYT2Q8N9I0 419 aaPredicted RBP11.4□□□□□ -0.58
SNF8-214ENST00000515174 CACTINQ8WUQ7 758 aaKnown RBP11.4□□□□□ -0.58
SNF8-214ENST00000515174 NELFBQ8WX92 580 aa11.4□□□□□ -0.58
SNF8-214ENST00000515174 CNKSR2Q8WXI2 1034 aa11.4□□□□□ -0.58
SNF8-214ENST00000515174 DNAJC19Q96DA6 116 aa11.4□□□□□ -0.58
SNF8-214ENST00000515174 AGBL1Q96MI9 1066 aa11.4□□□□□ -0.58
SNF8-214ENST00000515174 NAP1L5Q96NT1 182 aaPredicted RBP11.4□□□□□ -0.58
SNF8-214ENST00000515174 HSD17B14Q9BPX1 270 aa11.4□□□□□ -0.58
SNF8-214ENST00000515174 THAP9Q9H5L6 903 aa11.4□□□□□ -0.58
SNF8-214ENST00000515174 SAMSN1Q9NSI8 373 aaKnown RBP11.4□□□□□ -0.58
SNF8-214ENST00000515174 EXOC1Q9NV70 894 aa11.4□□□□□ -0.58
SNF8-214ENST00000515174 TMOD4Q9NZQ9 345 aa11.4□□□□□ -0.58
SNF8-214ENST00000515174 NRBP1Q9UHY1 535 aa11.4□□□□□ -0.58
SNF8-214ENST00000515174 FRMD3A2A2Y4 597 aa11.39□□□□□ -0.59
SNF8-214ENST00000515174 CXCL11O14625 94 aa11.39□□□□□ -0.59
SNF8-214ENST00000515174 SPATA31C1P0DKV0 1188 aa11.39□□□□□ -0.59
SNF8-214ENST00000515174 EEF1GP26641 437 aaKnown RBP11.39□□□□□ -0.59
SNF8-214ENST00000515174 ASIC1P78348 528 aa11.39□□□□□ -0.59
SNF8-214ENST00000515174 PDE4DQ08499 809 aa11.39□□□□□ -0.59
SNF8-214ENST00000515174 MKRN3Q13064 507 aaKnown RBP11.39□□□□□ -0.59
SNF8-214ENST00000515174 TBX2Q13207 712 aaPredicted RBP11.39□□□□□ -0.59
SNF8-214ENST00000515174 EPHA7Q15375 998 aa11.39□□□□□ -0.59
SNF8-214ENST00000515174 ECM1Q16610 540 aa11.39□□□□□ -0.59
SNF8-214ENST00000515174 CCDC144BQ3MJ40 725 aa11.39□□□□□ -0.59
SNF8-214ENST00000515174 FILIP1LQ4L180 1135 aa11.39□□□□□ -0.59
SNF8-214ENST00000515174 TTI2Q6NXR4 508 aa11.39□□□□□ -0.59
SNF8-214ENST00000515174 FBXO46Q6PJ61 603 aaPredicted RBP11.39□□□□□ -0.59
SNF8-214ENST00000515174 CATSPER3Q86XQ3 398 aa11.39□□□□□ -0.59
SNF8-214ENST00000515174 NEK9Q8TD19 979 aa11.39□□□□□ -0.59
SNF8-214ENST00000515174 SYTL5Q8TDW5 730 aaPredicted RBP11.39□□□□□ -0.59
SNF8-214ENST00000515174 DDX12PQ92771 950 aa11.39□□□□□ -0.59
SNF8-214ENST00000515174 PLIN2Q99541 437 aa11.39□□□□□ -0.59
SNF8-214ENST00000515174 TANGO6Q9C0B7 1094 aa11.39□□□□□ -0.59
SNF8-214ENST00000515174 ELP3Q9H9T3 547 aa11.39□□□□□ -0.59
SNF8-214ENST00000515174 RTN4Q9NQC3 1192 aaKnown RBP11.39□□□□□ -0.59
SNF8-214ENST00000515174 ADD3Q9UEY8 706 aaKnown RBP11.39□□□□□ -0.59
SNF8-214ENST00000515174 DNM3Q9UQ16 869 aa11.39□□□□□ -0.59
SNF8-214ENST00000515174 CTDP1Q9Y5B0 961 aaPredicted RBP11.39□□□□□ -0.59
SNF8-214ENST00000515174 UBIAD1Q9Y5Z9 338 aa11.39□□□□□ -0.59
SNF8-214ENST00000515174 CSADQ9Y600 493 aa11.39□□□□□ -0.59
SNF8-214ENST00000515174 GPR25O00155 361 aa11.38□□□□□ -0.59
SNF8-214ENST00000515174 MED24O75448 989 aa11.38□□□□□ -0.59
SNF8-214ENST00000515174 OFD1O75665 1012 aa11.38□□□□□ -0.59
SNF8-214ENST00000515174 PLA2G4BP0C869 781 aa11.38□□□□□ -0.59
SNF8-214ENST00000515174 PBX1P40424 430 aa11.38□□□□□ -0.59
SNF8-214ENST00000515174 SLC12A3P55017 1021 aa11.38□□□□□ -0.59
SNF8-214ENST00000515174 PPATQ06203 517 aa11.38□□□□□ -0.59
SNF8-214ENST00000515174 STK4Q13043 487 aa11.38□□□□□ -0.59
SNF8-214ENST00000515174 NOLC1Q14978 699 aaKnown RBP eCLIP11.38□□□□□ -0.59
SNF8-214ENST00000515174 TPD52L1Q16890 204 aaPredicted RBP11.38□□□□□ -0.59
SNF8-214ENST00000515174 LBX2Q6XYB7 198 aa11.38□□□□□ -0.59
SNF8-214ENST00000515174 ARMC9Q7Z3E5 817 aa11.38□□□□□ -0.59
SNF8-214ENST00000515174 KCNK18Q7Z418 384 aa11.38□□□□□ -0.59
SNF8-214ENST00000515174 CCDC65Q8IXS2 484 aa11.38□□□□□ -0.59
SNF8-214ENST00000515174 SMYD4Q8IYR2 804 aaPredicted RBP11.38□□□□□ -0.59
SNF8-214ENST00000515174 MB21D1Q8N884 522 aa11.38□□□□□ -0.59
SNF8-214ENST00000515174 CCDC112Q8NEF3 446 aa11.38□□□□□ -0.59
SNF8-214ENST00000515174 ANKRD20A12PQ8NF67 263 aa11.38□□□□□ -0.59
SNF8-214ENST00000515174 P2RX5Q93086 422 aa11.38□□□□□ -0.59
SNF8-214ENST00000515174 ZNF830Q96NB3 372 aaPredicted RBP11.38□□□□□ -0.59
SNF8-214ENST00000515174 TMX1Q9H3N1 280 aa11.38□□□□□ -0.59
SNF8-214ENST00000515174 RAVER2Q9HCJ3 691 aaKnown RBP11.38□□□□□ -0.59
SNF8-214ENST00000515174 JADE2Q9NQC1 790 aa11.38□□□□□ -0.59
SNF8-214ENST00000515174 INTS13Q9NVM9 706 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms