RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 CAGE1Q8TC20 777 aa28.05■■■□□ 2.08
SNF8-213ENST00000514929 GPR20Q99678 358 aa28.05■■■□□ 2.08
SNF8-213ENST00000514929 UBIAD1Q9Y5Z9 338 aa28.05■■■□□ 2.08
SNF8-213ENST00000514929 DOCK5Q9H7D0 1870 aa28.04■■■□□ 2.08
SNF8-213ENST00000514929 H3BRB1 525 aa28.04■■■□□ 2.08
SNF8-213ENST00000514929 SCG2P13521 617 aa28.04■■■□□ 2.08
SNF8-213ENST00000514929 MTMR1Q13613 665 aa28.04■■■□□ 2.08
SNF8-213ENST00000514929 CTAGE1Q96RT6 745 aa28.04■■■□□ 2.08
SNF8-213ENST00000514929 SEMA6BQ9H3T3 888 aa28.04■■■□□ 2.08
SNF8-213ENST00000514929 TUT1Q9H6E5 874 aaKnown RBP28.04■■■□□ 2.08
SNF8-213ENST00000514929 CXXC1Q9P0U4 656 aaPredicted RBP28.04■■■□□ 2.08
SNF8-213ENST00000514929 STXBP5LQ9Y2K9 1186 aa28.04■■■□□ 2.08
SNF8-213ENST00000514929 DNAJB2P25686 324 aa28.03■■■□□ 2.08
SNF8-213ENST00000514929 AKAP17AQ02040 695 aaKnown RBP28.03■■■□□ 2.08
SNF8-213ENST00000514929 AFAP1L1Q8TED9 768 aa28.03■■■□□ 2.08
SNF8-213ENST00000514929 PGBD1Q96JS3 809 aa28.03■■■□□ 2.08
SNF8-213ENST00000514929 TM6SF1Q9BZW5 370 aa28.03■■■□□ 2.08
SNF8-213ENST00000514929 JADE2Q9NQC1 790 aa28.03■■■□□ 2.08
SNF8-213ENST00000514929 TANC1Q9C0D5 1861 aa28.02■■■□□ 2.08
SNF8-213ENST00000514929 ZBBXA8MT70 800 aa28.02■■■□□ 2.08
SNF8-213ENST00000514929 GRXCR1A8MXD5 290 aa28.02■■■□□ 2.08
SNF8-213ENST00000514929 PRPF3O43395 683 aaKnown RBP28.02■■■□□ 2.08
SNF8-213ENST00000514929 ATP9AO75110 1047 aa28.02■■■□□ 2.08
SNF8-213ENST00000514929 PDIA3P30101 505 aaKnown RBP28.02■■■□□ 2.08
SNF8-213ENST00000514929 AP3B2Q13367 1082 aa28.02■■■□□ 2.08
SNF8-213ENST00000514929 UTP14CQ5TAP6 766 aaKnown RBP28.02■■■□□ 2.08
SNF8-213ENST00000514929 PHKBQ93100 1093 aa28.02■■■□□ 2.08
SNF8-213ENST00000514929 VWCEQ96DN2 955 aa28.02■■■□□ 2.08
SNF8-213ENST00000514929 GUCD1Q96NT3 240 aa28.02■■■□□ 2.08
SNF8-213ENST00000514929 ANO3Q9BYT9 981 aa28.02■■■□□ 2.08
SNF8-213ENST00000514929 UPF3BQ9BZI7 483 aaKnown RBP28.02■■■□□ 2.08
SNF8-213ENST00000514929 PKD2L1Q9P0L9 805 aa28.02■■■□□ 2.08
SNF8-213ENST00000514929 TMEM265A0A087WTH1 108 aa28.01■■■□□ 2.07
SNF8-213ENST00000514929 MAFGO15525 162 aa28.01■■■□□ 2.07
SNF8-213ENST00000514929 KCNA2P16389 499 aa28.01■■■□□ 2.07
SNF8-213ENST00000514929 EVCP57679 992 aa28.01■■■□□ 2.07
SNF8-213ENST00000514929 CCT2P78371 535 aaKnown RBP28.01■■■□□ 2.07
SNF8-213ENST00000514929 PTK7Q13308 1070 aa28.01■■■□□ 2.07
SNF8-213ENST00000514929 TOB2Q14106 344 aaPredicted RBP28.01■■■□□ 2.07
SNF8-213ENST00000514929 CCDC12Q8WUD4 166 aaPredicted RBP28.01■■■□□ 2.07
SNF8-213ENST00000514929 DHX38Q92620 1227 aaKnown RBP28.01■■■□□ 2.07
SNF8-213ENST00000514929 FTOQ9C0B1 505 aaKnown RBP eCLIP28.01■■■□□ 2.07
SNF8-213ENST00000514929 TTYH1Q9H313 450 aaPredicted RBP28.01■■■□□ 2.07
SNF8-213ENST00000514929 TMEM260Q9NX78 707 aa28.01■■■□□ 2.07
SNF8-213ENST00000514929 SCN5AQ14524 2016 aa28.01■■■□□ 2.07
SNF8-213ENST00000514929 ACTN1P12814 892 aa28■■■□□ 2.07
SNF8-213ENST00000514929 SELPP16109 830 aa28■■■□□ 2.07
SNF8-213ENST00000514929 ZNF200P98182 395 aaPredicted RBP28■■■□□ 2.07
SNF8-213ENST00000514929 LRRC8DQ7L1W4 858 aa28■■■□□ 2.07
SNF8-213ENST00000514929 TIFAQ96CG3 184 aa28■■■□□ 2.07
SNF8-213ENST00000514929 MXRA8Q9BRK3 442 aa28■■■□□ 2.07
SNF8-213ENST00000514929 NCOA5Q9HCD5 579 aaKnown RBP28■■■□□ 2.07
SNF8-213ENST00000514929 ZNF215Q9UL58 517 aaPredicted RBP28■■■□□ 2.07
SNF8-213ENST00000514929 TELO2Q9Y4R8 837 aa28■■■□□ 2.07
SNF8-213ENST00000514929 SLC4A7Q9Y6M7 1214 aa28■■■□□ 2.07
SNF8-213ENST00000514929 C17orf102A2RUQ5 167 aa27.99■■■□□ 2.07
SNF8-213ENST00000514929 CLK2P49760 499 aaKnown RBP27.99■■■□□ 2.07
SNF8-213ENST00000514929 NTRK3Q16288 839 aa27.99■■■□□ 2.07
SNF8-213ENST00000514929 PKN1Q16512 942 aa27.99■■■□□ 2.07
SNF8-213ENST00000514929 TRIM50Q86XT4 487 aa27.99■■■□□ 2.07
SNF8-213ENST00000514929 SLC26A6Q9BXS9 759 aa27.99■■■□□ 2.07
SNF8-213ENST00000514929 RNF26Q9BY78 433 aaPredicted RBP27.99■■■□□ 2.07
SNF8-213ENST00000514929 PBX4Q9BYU1 374 aa27.99■■■□□ 2.07
SNF8-213ENST00000514929 C6orf50Q9HD87 102 aa27.99■■■□□ 2.07
SNF8-213ENST00000514929 PPFIA3O75145 1194 aa27.98■■■□□ 2.07
SNF8-213ENST00000514929 SMIM10L2AP0DMW4 78 aa27.98■■■□□ 2.07
SNF8-213ENST00000514929 SMIM10L2BP0DMW5 78 aa27.98■■■□□ 2.07
SNF8-213ENST00000514929 CKBP12277 381 aa27.98■■■□□ 2.07
SNF8-213ENST00000514929 IFNAR1P17181 557 aa27.98■■■□□ 2.07
SNF8-213ENST00000514929 TCF7P36402 384 aaPredicted RBP27.98■■■□□ 2.07
SNF8-213ENST00000514929 PBX2P40425 430 aa27.98■■■□□ 2.07
SNF8-213ENST00000514929 RBL2Q08999 1139 aa27.98■■■□□ 2.07
SNF8-213ENST00000514929 HIC1Q14526 733 aa27.98■■■□□ 2.07
SNF8-213ENST00000514929 JAKMIP3Q5VZ66 844 aa27.98■■■□□ 2.07
SNF8-213ENST00000514929 TRIP12Q14669 1992 aaPredicted RBP27.97■■■□□ 2.07
SNF8-213ENST00000514929 ESYT2A0FGR8 921 aa27.97■■■□□ 2.07
SNF8-213ENST00000514929 ZNF76P36508 570 aa27.97■■■□□ 2.07
SNF8-213ENST00000514929 SREBF1P36956 1147 aa27.97■■■□□ 2.07
SNF8-213ENST00000514929 RAB30Q15771 203 aa27.97■■■□□ 2.07
SNF8-213ENST00000514929 SEPT1Q8WYJ6 367 aa27.97■■■□□ 2.07
SNF8-213ENST00000514929 ATP6V0A1Q93050 837 aa27.97■■■□□ 2.07
SNF8-213ENST00000514929 CDX2Q99626 313 aaPredicted RBP27.97■■■□□ 2.07
SNF8-213ENST00000514929 ZMYND12Q9H0C1 365 aa27.97■■■□□ 2.07
SNF8-213ENST00000514929 KCNH7Q9NS40 1196 aa27.97■■■□□ 2.07
SNF8-213ENST00000514929 PDRG1Q9NUG6 133 aa27.97■■■□□ 2.07
SNF8-213ENST00000514929 MSRAQ9UJ68 235 aa27.97■■■□□ 2.07
SNF8-213ENST00000514929 PARNO95453 639 aaKnown RBP27.96■■■□□ 2.07
SNF8-213ENST00000514929 CEP55Q53EZ4 464 aa27.96■■■□□ 2.07
SNF8-213ENST00000514929 MCTP2Q6DN12 878 aa27.96■■■□□ 2.07
SNF8-213ENST00000514929 CYP2W1Q8TAV3 490 aa27.96■■■□□ 2.07
SNF8-213ENST00000514929 ZNF274Q96GC6 653 aaPredicted RBP27.96■■■□□ 2.07
SNF8-213ENST00000514929 LARP6Q9BRS8 491 aaKnown RBP27.96■■■□□ 2.07
SNF8-213ENST00000514929 RNPEPQ9H4A4 650 aa27.96■■■□□ 2.07
SNF8-213ENST00000514929 GNAT1P11488 350 aa27.95■■■□□ 2.06
SNF8-213ENST00000514929 GNA11P29992 359 aa27.95■■■□□ 2.06
SNF8-213ENST00000514929 ARHGAP4P98171 946 aa27.95■■■□□ 2.06
SNF8-213ENST00000514929 TRIM71Q2Q1W2 868 aaKnown RBP27.95■■■□□ 2.06
SNF8-213ENST00000514929 SERINC5Q86VE9 423 aa27.95■■■□□ 2.06
SNF8-213ENST00000514929 REXO1Q8N1G1 1221 aaKnown RBP27.95■■■□□ 2.06
SNF8-213ENST00000514929 WNT8BQ93098 351 aa27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms