RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 GRIN2DO15399 1336 aa15.88■□□□□ 0.13
USP46-209ENST00000514536 CCDC194A0A1B0GVG4 234 aa15.87■□□□□ 0.13
USP46-209ENST00000514536 NOP56O00567 594 aaKnown RBP15.87■□□□□ 0.13
USP46-209ENST00000514536 PQBP1O60828 265 aaKnown RBP15.87■□□□□ 0.13
USP46-209ENST00000514536 PPFIA4O75335 1185 aa15.87■□□□□ 0.13
USP46-209ENST00000514536 CIITAP33076 1130 aa15.87■□□□□ 0.13
USP46-209ENST00000514536 KRT2P35908 639 aa15.87■□□□□ 0.13
USP46-209ENST00000514536 CDK7P50613 346 aa15.87■□□□□ 0.13
USP46-209ENST00000514536 USP11P51784 963 aa15.87■□□□□ 0.13
USP46-209ENST00000514536 CHMP4BP1P59074 171 aa15.87■□□□□ 0.13
USP46-209ENST00000514536 GUCY1B3Q02153 619 aa15.87■□□□□ 0.13
USP46-209ENST00000514536 SP4Q02446 784 aa15.87■□□□□ 0.13
USP46-209ENST00000514536 NONOQ15233 471 aaKnown RBP eCLIP15.87■□□□□ 0.13
USP46-209ENST00000514536 NIPA1Q7RTP0 329 aa15.87■□□□□ 0.13
USP46-209ENST00000514536 UIMC1Q96RL1 719 aa15.87■□□□□ 0.13
USP46-209ENST00000514536 AGO4Q9HCK5 861 aaKnown RBP15.87■□□□□ 0.13
USP46-209ENST00000514536 ZMYND8Q9ULU4 1186 aaPredicted RBP15.87■□□□□ 0.13
USP46-209ENST00000514536 IGLV3-22A0A075B6J6 115 aa15.87■□□□□ 0.13
USP46-209ENST00000514536 MMP1P03956 469 aa15.87■□□□□ 0.13
USP46-209ENST00000514536 NR5A1Q13285 461 aa15.87■□□□□ 0.13
USP46-209ENST00000514536 INF2Q27J81 1249 aa15.87■□□□□ 0.13
USP46-209ENST00000514536 PRR16Q569H4 304 aa15.87■□□□□ 0.13
USP46-209ENST00000514536 PIK3AP1Q6ZUJ8 805 aa15.87■□□□□ 0.13
USP46-209ENST00000514536 PPP1R13LQ8WUF5 828 aa15.87■□□□□ 0.13
USP46-209ENST00000514536 C8orf76Q96K31 380 aa15.87■□□□□ 0.13
USP46-209ENST00000514536 GPR20Q99678 358 aa15.87■□□□□ 0.13
USP46-209ENST00000514536 BRMS1Q9HCU9 246 aa15.87■□□□□ 0.13
USP46-209ENST00000514536 BTBD18B2RXH4 712 aa15.86■□□□□ 0.13
USP46-209ENST00000514536 ZNF286BP0CG31 522 aa15.86■□□□□ 0.13
USP46-209ENST00000514536 SYN1P17600 705 aa15.86■□□□□ 0.13
USP46-209ENST00000514536 NBPF20Q3BBV1 942 aa15.86■□□□□ 0.13
USP46-209ENST00000514536 EARS2Q5JPH6 523 aaKnown RBP15.86■□□□□ 0.13
USP46-209ENST00000514536 DIS3L2Q8IYB7 885 aaKnown RBP15.86■□□□□ 0.13
USP46-209ENST00000514536 SLC43A3Q8NBI5 491 aa15.86■□□□□ 0.13
USP46-209ENST00000514536 KAT2BQ92831 832 aa15.86■□□□□ 0.13
USP46-209ENST00000514536 DCDC2CA8MYV0 355 aa15.85■□□□□ 0.13
USP46-209ENST00000514536 HOXD8P13378 290 aaPredicted RBP15.85■□□□□ 0.13
USP46-209ENST00000514536 FXR1P51114 621 aaKnown RBP eCLIP15.85■□□□□ 0.13
USP46-209ENST00000514536 ITGB3BPQ13352 177 aaPredicted RBP15.85■□□□□ 0.13
USP46-209ENST00000514536 ANKRD33Q7Z3H0 272 aa15.85■□□□□ 0.13
USP46-209ENST00000514536 TOX2Q96NM4 488 aa15.85■□□□□ 0.13
USP46-209ENST00000514536 SDF4Q9BRK5 362 aa15.85■□□□□ 0.13
USP46-209ENST00000514536 GSTTP1A0A1W2PQM5 241 aa15.84■□□□□ 0.13
USP46-209ENST00000514536 FAM205CA6NFA0 338 aa15.84■□□□□ 0.13
USP46-209ENST00000514536 TDP2O95551 362 aa15.84■□□□□ 0.13
USP46-209ENST00000514536 SETQ01105 290 aaPredicted RBP15.84■□□□□ 0.13
USP46-209ENST00000514536 SAFBQ15424 915 aaKnown RBP eCLIP15.84■□□□□ 0.13
USP46-209ENST00000514536 UTP14CQ5TAP6 766 aaKnown RBP15.84■□□□□ 0.13
USP46-209ENST00000514536 SH3RF1Q7Z6J0 888 aa15.84■□□□□ 0.13
USP46-209ENST00000514536 SEPT1Q8WYJ6 367 aa15.84■□□□□ 0.13
USP46-209ENST00000514536 TNFRSF25Q93038 417 aa15.84■□□□□ 0.13
USP46-209ENST00000514536 ZNF577Q9BSK1 485 aa15.84■□□□□ 0.13
USP46-209ENST00000514536 C16orf70Q9BSU1 422 aa15.84■□□□□ 0.13
USP46-209ENST00000514536 SEZ6LQ9BYH1 1024 aa15.84■□□□□ 0.13
USP46-209ENST00000514536 JPH1Q9HDC5 661 aaPredicted RBP15.84■□□□□ 0.13
USP46-209ENST00000514536 PRDM5Q9NQX1 630 aaPredicted RBP15.84■□□□□ 0.13
USP46-209ENST00000514536 SLC9A2Q9UBY0 812 aa15.84■□□□□ 0.13
USP46-209ENST00000514536 CEP290O15078 2479 aa15.84■□□□□ 0.13
USP46-209ENST00000514536 NFASCO94856 1347 aa15.84■□□□□ 0.13
USP46-209ENST00000514536 MROH7Q68CQ1 1323 aa15.84■□□□□ 0.13
USP46-209ENST00000514536 DDX39AO00148 427 aaKnown RBP15.83■□□□□ 0.13
USP46-209ENST00000514536 IPO5O00410 1097 aaKnown RBP15.83■□□□□ 0.13
USP46-209ENST00000514536 LGALS2P05162 132 aa15.83■□□□□ 0.13
USP46-209ENST00000514536 PSEN2P49810 448 aa15.83■□□□□ 0.13
USP46-209ENST00000514536 FAAP100Q0VG06 881 aa15.83■□□□□ 0.13
USP46-209ENST00000514536 MFSD10Q14728 455 aa15.83■□□□□ 0.13
USP46-209ENST00000514536 LETM2Q2VYF4 491 aa15.83■□□□□ 0.13
USP46-209ENST00000514536 FAM47CQ5HY64 1035 aa15.83■□□□□ 0.13
USP46-209ENST00000514536 NEK8Q86SG6 692 aa15.83■□□□□ 0.13
USP46-209ENST00000514536 FAM126BQ8IXS8 530 aa15.83■□□□□ 0.13
USP46-209ENST00000514536 FBXO18Q8NFZ0 1043 aa15.83■□□□□ 0.13
USP46-209ENST00000514536 LENG9Q96B70 501 aa15.83■□□□□ 0.13
USP46-209ENST00000514536 TRPV6Q9H1D0 765 aa15.83■□□□□ 0.13
USP46-209ENST00000514536 CYP3A7-CYP3A51PA0A087WV96 503 aa15.83■□□□□ 0.12
USP46-209ENST00000514536 TRIM43BA6NCK2 446 aa15.83■□□□□ 0.12
USP46-209ENST00000514536 TLR3O15455 904 aaKnown RBP15.83■□□□□ 0.12
USP46-209ENST00000514536 MSH4O15457 936 aa15.83■□□□□ 0.12
USP46-209ENST00000514536 DHX15O43143 795 aaKnown RBP15.83■□□□□ 0.12
USP46-209ENST00000514536 F2P00734 622 aa15.83■□□□□ 0.12
USP46-209ENST00000514536 CLTBP09497 229 aa15.83■□□□□ 0.12
USP46-209ENST00000514536 CYP3A7P24462 503 aa15.83■□□□□ 0.12
USP46-209ENST00000514536 GJB2P29033 226 aa15.83■□□□□ 0.12
USP46-209ENST00000514536 TCF7P36402 384 aaPredicted RBP15.83■□□□□ 0.12
USP46-209ENST00000514536 KIAA0753Q2KHM9 967 aa15.83■□□□□ 0.12
USP46-209ENST00000514536 Q4G0T1 1027 aa15.83■□□□□ 0.12
USP46-209ENST00000514536 NFRKBQ6P4R8 1299 aa15.83■□□□□ 0.12
USP46-209ENST00000514536 TRIM43Q96BQ3 446 aaPredicted RBP15.83■□□□□ 0.12
USP46-209ENST00000514536 KATNAL1Q9BW62 490 aa15.83■□□□□ 0.12
USP46-209ENST00000514536 PDLIM7Q9NR12 457 aa15.83■□□□□ 0.12
USP46-209ENST00000514536 TMEM39AQ9NV64 488 aa15.83■□□□□ 0.12
USP46-209ENST00000514536 PRKAG2Q9UGJ0 569 aa15.83■□□□□ 0.12
USP46-209ENST00000514536 SMC3Q9UQE7 1217 aa15.83■□□□□ 0.12
USP46-209ENST00000514536 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.83■□□□□ 0.12
USP46-209ENST00000514536 H3BRB1 525 aa15.82■□□□□ 0.12
USP46-209ENST00000514536 HAS3O00219 553 aa15.82■□□□□ 0.12
USP46-209ENST00000514536 B4GALT4O60513 344 aa15.82■□□□□ 0.12
USP46-209ENST00000514536 CD4P01730 458 aa15.82■□□□□ 0.12
USP46-209ENST00000514536 CUL4AQ13619 759 aa15.82■□□□□ 0.12
USP46-209ENST00000514536 MOXD1Q6UVY6 613 aa15.82■□□□□ 0.12
USP46-209ENST00000514536 TRIM50Q86XT4 487 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms