RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 ZNF669Q96BR6 464 aaPredicted RBP5.99□□□□□ -1.45
CLDND1-228ENST00000513873 INTS4Q96HW7 963 aaKnown RBP5.99□□□□□ -1.45
CLDND1-228ENST00000513873 JMJD8Q96S16 334 aa5.99□□□□□ -1.45
CLDND1-228ENST00000513873 DIRC2Q96SL1 478 aa5.99□□□□□ -1.45
CLDND1-228ENST00000513873 MCMBPQ9BTE3 642 aa5.99□□□□□ -1.45
CLDND1-228ENST00000513873 DCP1AQ9NPI6 582 aaPredicted RBP5.99□□□□□ -1.45
CLDND1-228ENST00000513873 IQGAP3Q86VI3 1631 aa5.99□□□□□ -1.45
CLDND1-228ENST00000513873 MROH1Q8NDA8 1641 aa5.99□□□□□ -1.45
CLDND1-228ENST00000513873 LMTK2Q8IWU2 1503 aa5.99□□□□□ -1.45
CLDND1-228ENST00000513873 ROCK2O75116 1388 aaKnown RBP5.98□□□□□ -1.45
CLDND1-228ENST00000513873 TMEM2Q9UHN6 1383 aa5.98□□□□□ -1.45
CLDND1-228ENST00000513873 OR14I1A6ND48 311 aa5.98□□□□□ -1.45
CLDND1-228ENST00000513873 ZNF503-AS2A6NEH8 195 aa5.98□□□□□ -1.45
CLDND1-228ENST00000513873 MPOP05164 745 aa5.98□□□□□ -1.45
CLDND1-228ENST00000513873 HSPA5P11021 654 aaKnown RBP5.98□□□□□ -1.45
CLDND1-228ENST00000513873 PLS3P13797 630 aa5.98□□□□□ -1.45
CLDND1-228ENST00000513873 RASGRF1Q13972 1273 aa5.98□□□□□ -1.45
CLDND1-228ENST00000513873 NFE2L2Q16236 605 aa5.98□□□□□ -1.45
CLDND1-228ENST00000513873 ADGRF1Q5T601 910 aa5.98□□□□□ -1.45
CLDND1-228ENST00000513873 CIAPIN1Q6FI81 312 aa5.98□□□□□ -1.45
CLDND1-228ENST00000513873 LRP10Q7Z4F1 713 aa5.98□□□□□ -1.45
CLDND1-228ENST00000513873 CABP7Q86V35 215 aa5.98□□□□□ -1.45
CLDND1-228ENST00000513873 IRF2BP1Q8IU81 584 aa5.98□□□□□ -1.45
CLDND1-228ENST00000513873 TMEM52Q8NDY8 209 aa5.98□□□□□ -1.45
CLDND1-228ENST00000513873 KCTD13Q8WZ19 329 aa5.98□□□□□ -1.45
CLDND1-228ENST00000513873 DEPDC7Q96QD5 511 aa5.98□□□□□ -1.45
CLDND1-228ENST00000513873 SLC26A8Q96RN1 970 aa5.98□□□□□ -1.45
CLDND1-228ENST00000513873 LGR4Q9BXB1 951 aa5.98□□□□□ -1.45
CLDND1-228ENST00000513873 EPB41L4BQ9H329 900 aa5.98□□□□□ -1.45
CLDND1-228ENST00000513873 NSUN3Q9H649 340 aaKnown RBP5.98□□□□□ -1.45
CLDND1-228ENST00000513873 GPRC5CQ9NQ84 441 aa5.98□□□□□ -1.45
CLDND1-228ENST00000513873 CLEC1BQ9P126 229 aa5.98□□□□□ -1.45
CLDND1-228ENST00000513873 IMPACTQ9P2X3 320 aa5.98□□□□□ -1.45
CLDND1-228ENST00000513873 ARHGAP31Q2M1Z3 1444 aa5.98□□□□□ -1.45
CLDND1-228ENST00000513873 SPHKAPQ2M3C7 1700 aa5.97□□□□□ -1.45
CLDND1-228ENST00000513873 EIF3AQ14152 1382 aaKnown RBP5.97□□□□□ -1.45
CLDND1-228ENST00000513873 TRAV20A0A0B4J274 112 aa5.97□□□□□ -1.45
CLDND1-228ENST00000513873 A0A1W2PQU0 124 aa5.97□□□□□ -1.45
CLDND1-228ENST00000513873 MEFVO15553 781 aaPredicted RBP5.97□□□□□ -1.45
CLDND1-228ENST00000513873 MYO1BO43795 1136 aa5.97□□□□□ -1.45
CLDND1-228ENST00000513873 THBDP07204 575 aa5.97□□□□□ -1.45
CLDND1-228ENST00000513873 ATF3P18847 181 aa5.97□□□□□ -1.45
CLDND1-228ENST00000513873 CORO7P57737 925 aa5.97□□□□□ -1.45
CLDND1-228ENST00000513873 PPP2R2AP63151 447 aa5.97□□□□□ -1.45
CLDND1-228ENST00000513873 SSRP1Q08945 709 aaKnown RBP5.97□□□□□ -1.45
CLDND1-228ENST00000513873 BICRALQ6AI39 1079 aa5.97□□□□□ -1.45
CLDND1-228ENST00000513873 BRINP3Q76B58 766 aa5.97□□□□□ -1.45
CLDND1-228ENST00000513873 DEFB132Q7Z7B7 95 aa5.97□□□□□ -1.45
CLDND1-228ENST00000513873 CPNE8Q86YQ8 564 aa5.97□□□□□ -1.45
CLDND1-228ENST00000513873 COPS5Q92905 334 aa5.97□□□□□ -1.45
CLDND1-228ENST00000513873 MKL1Q969V6 931 aa5.97□□□□□ -1.45
CLDND1-228ENST00000513873 CDC6Q99741 560 aa5.97□□□□□ -1.45
CLDND1-228ENST00000513873 AARSD1Q9BTE6 412 aaKnown RBP5.97□□□□□ -1.45
CLDND1-228ENST00000513873 SPATA9Q9BWV2 254 aa5.97□□□□□ -1.45
CLDND1-228ENST00000513873 SP110Q9HB58 689 aa5.97□□□□□ -1.45
CLDND1-228ENST00000513873 PDLIM7Q9NR12 457 aa5.97□□□□□ -1.45
CLDND1-228ENST00000513873 ACSL6Q9UKU0 697 aa5.97□□□□□ -1.45
CLDND1-228ENST00000513873 ATRNO75882 1429 aa5.97□□□□□ -1.45
CLDND1-228ENST00000513873 BRWD3Q6RI45 1802 aa5.97□□□□□ -1.45
CLDND1-228ENST00000513873 CHD4Q14839 1912 aa5.96□□□□□ -1.46
CLDND1-228ENST00000513873 ABLIM1O14639 778 aa5.96□□□□□ -1.46
CLDND1-228ENST00000513873 APPP05067 770 aa5.96□□□□□ -1.46
CLDND1-228ENST00000513873 C1QTNF9P0C862 333 aa5.96□□□□□ -1.46
CLDND1-228ENST00000513873 GALK1P51570 392 aa5.96□□□□□ -1.46
CLDND1-228ENST00000513873 C1QTNF8P60827 252 aa5.96□□□□□ -1.46
CLDND1-228ENST00000513873 DDX10Q13206 875 aaKnown RBP5.96□□□□□ -1.46
CLDND1-228ENST00000513873 KCNAB2Q13303 367 aa5.96□□□□□ -1.46
CLDND1-228ENST00000513873 E4F1Q66K89 784 aaPredicted RBP5.96□□□□□ -1.46
CLDND1-228ENST00000513873 PRR23BQ6ZRT6 265 aa5.96□□□□□ -1.46
CLDND1-228ENST00000513873 DPH6Q7L8W6 267 aa5.96□□□□□ -1.46
CLDND1-228ENST00000513873 ZNF605Q86T29 641 aa5.96□□□□□ -1.46
CLDND1-228ENST00000513873 FBXO15Q8NCQ5 510 aaPredicted RBP5.96□□□□□ -1.46
CLDND1-228ENST00000513873 DIO2Q92813 273 aa5.96□□□□□ -1.46
CLDND1-228ENST00000513873 BORCS6Q96GS4 357 aa5.96□□□□□ -1.46
CLDND1-228ENST00000513873 MRFAP1L1Q96HT8 127 aa5.96□□□□□ -1.46
CLDND1-228ENST00000513873 MMP19Q99542 508 aa5.96□□□□□ -1.46
CLDND1-228ENST00000513873 PLCD4Q9BRC7 762 aa5.96□□□□□ -1.46
CLDND1-228ENST00000513873 IER2Q9BTL4 223 aa5.96□□□□□ -1.46
CLDND1-228ENST00000513873 OSBPL2Q9H1P3 480 aa5.96□□□□□ -1.46
CLDND1-228ENST00000513873 USP35Q9P2H5 1018 aa5.96□□□□□ -1.46
CLDND1-228ENST00000513873 PFDN2Q9UHV9 154 aa5.96□□□□□ -1.46
CLDND1-228ENST00000513873 DBR1Q9UK59 544 aaKnown RBP5.96□□□□□ -1.46
CLDND1-228ENST00000513873 MSRB2Q9Y3D2 182 aa5.96□□□□□ -1.46
CLDND1-228ENST00000513873 PIK3C2BO00750 1634 aa5.96□□□□□ -1.46
CLDND1-228ENST00000513873 USP47Q96K76 1375 aa5.95□□□□□ -1.46
CLDND1-228ENST00000513873 TRPM2O94759 1503 aa5.95□□□□□ -1.46
CLDND1-228ENST00000513873 NOTOA8MTQ0 251 aa5.95□□□□□ -1.46
CLDND1-228ENST00000513873 NPIPB6E9PJ23 425 aa5.95□□□□□ -1.46
CLDND1-228ENST00000513873 PRODHO43272 600 aa5.95□□□□□ -1.46
CLDND1-228ENST00000513873 TBX1O43435 398 aa5.95□□□□□ -1.46
CLDND1-228ENST00000513873 TMEM253P0C7T8 217 aa5.95□□□□□ -1.46
CLDND1-228ENST00000513873 TMF1P82094 1093 aa5.95□□□□□ -1.46
CLDND1-228ENST00000513873 RAB3GAP1Q15042 981 aa5.95□□□□□ -1.46
CLDND1-228ENST00000513873 NBPF8Q3BBV2 869 aa5.95□□□□□ -1.46
CLDND1-228ENST00000513873 NSMFQ6X4W1 530 aa5.95□□□□□ -1.46
CLDND1-228ENST00000513873 PPIL6Q8IXY8 311 aa5.95□□□□□ -1.46
CLDND1-228ENST00000513873 LZTR1Q8N653 840 aa5.95□□□□□ -1.46
CLDND1-228ENST00000513873 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.95□□□□□ -1.46
CLDND1-228ENST00000513873 NLGN2Q8NFZ4 835 aa5.95□□□□□ -1.46
CLDND1-228ENST00000513873 CHAMP1Q96JM3 812 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms