RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 RIMBP3Q9UFD9 1639 aa5.74□□□□□ -1.49
HTT-210ENST00000512909 SYNJ1O43426 1573 aa5.73□□□□□ -1.49
HTT-210ENST00000512909 ZBTB7AO95365 584 aa5.73□□□□□ -1.49
HTT-210ENST00000512909 ITGB7P26010 798 aa5.73□□□□□ -1.49
HTT-210ENST00000512909 KPNA1P52294 538 aaPredicted RBP5.73□□□□□ -1.49
HTT-210ENST00000512909 ARHGAP36Q6ZRI8 547 aa5.73□□□□□ -1.49
HTT-210ENST00000512909 MILR1Q7Z6M3 343 aa5.73□□□□□ -1.49
HTT-210ENST00000512909 ZSWIM9Q86XI8 627 aa5.73□□□□□ -1.49
HTT-210ENST00000512909 THNSL2Q86YJ6 484 aa5.73□□□□□ -1.49
HTT-210ENST00000512909 CHST14Q8NCH0 376 aa5.73□□□□□ -1.49
HTT-210ENST00000512909 PIP4K2CQ8TBX8 421 aa5.73□□□□□ -1.49
HTT-210ENST00000512909 PHOSPHO1Q8TCT1 267 aa5.73□□□□□ -1.49
HTT-210ENST00000512909 DPF3Q92784 378 aa5.73□□□□□ -1.49
HTT-210ENST00000512909 INTS4Q96HW7 963 aaKnown RBP5.73□□□□□ -1.49
HTT-210ENST00000512909 KRTAP9-2Q9BYQ4 174 aa5.73□□□□□ -1.49
HTT-210ENST00000512909 SLC6A20Q9NP91 592 aa5.73□□□□□ -1.49
HTT-210ENST00000512909 EBF1Q9UH73 591 aa5.73□□□□□ -1.49
HTT-210ENST00000512909 YBX2Q9Y2T7 364 aaKnown RBP5.73□□□□□ -1.49
HTT-210ENST00000512909 CHD1O14646 1710 aa5.73□□□□□ -1.49
HTT-210ENST00000512909 TOP2BQ02880 1626 aa5.73□□□□□ -1.49
HTT-210ENST00000512909 FHAD1B1AJZ9 1412 aa5.73□□□□□ -1.49
HTT-210ENST00000512909 KIF27Q86VH2 1401 aa5.73□□□□□ -1.49
HTT-210ENST00000512909 A0A087X0B3 334 aa5.72□□□□□ -1.49
HTT-210ENST00000512909 ZC3H12DA2A288 527 aaKnown RBP5.72□□□□□ -1.49
HTT-210ENST00000512909 PTPDC1A2A3K4 754 aa5.72□□□□□ -1.49
HTT-210ENST00000512909 GSG1L2A8MUP6 293 aa5.72□□□□□ -1.49
HTT-210ENST00000512909 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.72□□□□□ -1.49
HTT-210ENST00000512909 BRINP1O60477 761 aa5.72□□□□□ -1.49
HTT-210ENST00000512909 RAB11FIP3O75154 756 aa5.72□□□□□ -1.49
HTT-210ENST00000512909 GLRX3O76003 335 aaKnown RBP5.72□□□□□ -1.49
HTT-210ENST00000512909 GLI1P08151 1106 aa5.72□□□□□ -1.49
HTT-210ENST00000512909 PDE6AP16499 860 aa5.72□□□□□ -1.49
HTT-210ENST00000512909 GALK1P51570 392 aa5.72□□□□□ -1.49
HTT-210ENST00000512909 SLC9A5Q14940 896 aa5.72□□□□□ -1.49
HTT-210ENST00000512909 PCBP1Q15365 356 aaKnown RBP eCLIP5.72□□□□□ -1.49
HTT-210ENST00000512909 PKN3Q6P5Z2 889 aa5.72□□□□□ -1.49
HTT-210ENST00000512909 OTOP3Q7RTS5 596 aa5.72□□□□□ -1.49
HTT-210ENST00000512909 NLRP10Q86W26 655 aa5.72□□□□□ -1.49
HTT-210ENST00000512909 OSTM1Q86WC4 334 aa5.72□□□□□ -1.49
HTT-210ENST00000512909 KIF18BQ86Y91 864 aa5.72□□□□□ -1.49
HTT-210ENST00000512909 WDR48Q8TAF3 677 aa5.72□□□□□ -1.49
HTT-210ENST00000512909 PLEKHO2Q8TD55 490 aa5.72□□□□□ -1.49
HTT-210ENST00000512909 SCYL1Q96KG9 808 aa5.72□□□□□ -1.49
HTT-210ENST00000512909 GPR101Q96P66 508 aaPredicted RBP5.72□□□□□ -1.49
HTT-210ENST00000512909 MTA3Q9BTC8 594 aa5.72□□□□□ -1.49
HTT-210ENST00000512909 BOCQ9BWV1 1114 aa5.72□□□□□ -1.49
HTT-210ENST00000512909 SMOC1Q9H4F8 434 aa5.72□□□□□ -1.49
HTT-210ENST00000512909 IFT22Q9H7X7 185 aa5.72□□□□□ -1.49
HTT-210ENST00000512909 MYOTQ9UBF9 498 aa5.72□□□□□ -1.49
HTT-210ENST00000512909 FBXL7Q9UJT9 491 aa5.72□□□□□ -1.49
HTT-210ENST00000512909 ATP23Q9Y6H3 246 aa5.72□□□□□ -1.49
HTT-210ENST00000512909 CARMIL1Q5VZK9 1371 aa5.71□□□□□ -1.5
HTT-210ENST00000512909 ARNTLO00327 626 aa5.71□□□□□ -1.5
HTT-210ENST00000512909 DBHP09172 617 aa5.71□□□□□ -1.5
HTT-210ENST00000512909 VIL1P09327 827 aaKnown RBP5.71□□□□□ -1.5
HTT-210ENST00000512909 MSL3P1P0C860 447 aa5.71□□□□□ -1.5
HTT-210ENST00000512909 POU3F2P20265 443 aaPredicted RBP5.71□□□□□ -1.5
HTT-210ENST00000512909 SLC6A11P48066 632 aa5.71□□□□□ -1.5
HTT-210ENST00000512909 KIR3DS1Q14943 382 aa5.71□□□□□ -1.5
HTT-210ENST00000512909 DHCR24Q15392 516 aa5.71□□□□□ -1.5
HTT-210ENST00000512909 RGL3Q3MIN7 710 aa5.71□□□□□ -1.5
HTT-210ENST00000512909 CYP4F22Q6NT55 531 aa5.71□□□□□ -1.5
HTT-210ENST00000512909 ZC3H14Q6PJT7 736 aaKnown RBP5.71□□□□□ -1.5
HTT-210ENST00000512909 PTRH1Q86Y79 214 aaKnown RBP5.71□□□□□ -1.5
HTT-210ENST00000512909 WFDC3Q8IUB2 231 aa5.71□□□□□ -1.5
HTT-210ENST00000512909 PRPF38AQ8NAV1 312 aaKnown RBP5.71□□□□□ -1.5
HTT-210ENST00000512909 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.71□□□□□ -1.5
HTT-210ENST00000512909 ALG3Q92685 438 aa5.71□□□□□ -1.5
HTT-210ENST00000512909 RIC8BQ9NVN3 520 aa5.71□□□□□ -1.5
HTT-210ENST00000512909 SIRT5Q9NXA8 310 aa5.71□□□□□ -1.5
HTT-210ENST00000512909 ALG1L2C9J202 215 aa5.7□□□□□ -1.5
HTT-210ENST00000512909 CBX4O00257 560 aa5.7□□□□□ -1.5
HTT-210ENST00000512909 SCDO00767 359 aa5.7□□□□□ -1.5
HTT-210ENST00000512909 SLC27A2O14975 620 aa5.7□□□□□ -1.5
HTT-210ENST00000512909 SRGAP3O43295 1099 aa5.7□□□□□ -1.5
HTT-210ENST00000512909 ZEB2O60315 1214 aa5.7□□□□□ -1.5
HTT-210ENST00000512909 IRF9Q00978 393 aa5.7□□□□□ -1.5
HTT-210ENST00000512909 TIGD5Q53EQ6 642 aa5.7□□□□□ -1.5
HTT-210ENST00000512909 BTBD8Q5XKL5 378 aa5.7□□□□□ -1.5
HTT-210ENST00000512909 IQSEC1Q6DN90 963 aa5.7□□□□□ -1.5
HTT-210ENST00000512909 ZC3H18Q86VM9 953 aaKnown RBP5.7□□□□□ -1.5
HTT-210ENST00000512909 IRF2BP1Q8IU81 584 aa5.7□□□□□ -1.5
HTT-210ENST00000512909 NXPE1Q8N323 547 aa5.7□□□□□ -1.5
HTT-210ENST00000512909 WDR66Q8TBY9 1149 aa5.7□□□□□ -1.5
HTT-210ENST00000512909 FAM168AQ92567 244 aa5.7□□□□□ -1.5
HTT-210ENST00000512909 RXFP1Q9HBX9 757 aa5.7□□□□□ -1.5
HTT-210ENST00000512909 HOMER2Q9NSB8 354 aa5.7□□□□□ -1.5
HTT-210ENST00000512909 C19orf73Q9NVV2 129 aa5.7□□□□□ -1.5
HTT-210ENST00000512909 THG1LQ9NWX6 298 aaKnown RBP5.7□□□□□ -1.5
HTT-210ENST00000512909 FAM53CQ9NYF3 392 aa5.7□□□□□ -1.5
HTT-210ENST00000512909 B4GALT6Q9UBX8 382 aa5.7□□□□□ -1.5
HTT-210ENST00000512909 PALD1Q9ULE6 856 aa5.7□□□□□ -1.5
HTT-210ENST00000512909 CBLCQ9ULV8 474 aa5.7□□□□□ -1.5
HTT-210ENST00000512909 APOBEC2Q9Y235 224 aaKnown RBP5.7□□□□□ -1.5
HTT-210ENST00000512909 ATP8A1Q9Y2Q0 1164 aa5.7□□□□□ -1.5
HTT-210ENST00000512909 OAS3Q9Y6K5 1087 aaKnown RBP5.7□□□□□ -1.5
HTT-210ENST00000512909 PRG4Q92954 1404 aaPredicted RBP5.7□□□□□ -1.5
HTT-210ENST00000512909 GRIN2AQ12879 1464 aa5.7□□□□□ -1.5
HTT-210ENST00000512909 KRTAP9-6A0A140TA67 174 aa5.69□□□□□ -1.5
HTT-210ENST00000512909 PRAMEF25A6NGN4 478 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms