RNA–Protein interactions for RNA: ENST00000512725.5

DDR1-269, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-269ENST00000512725 MKRN4PQ13434 485 aaPredicted RBP18.57■□□□□ 0.56
DDR1-269ENST00000512725 ASPRV1Q53RT3 343 aa18.57■□□□□ 0.56
DDR1-269ENST00000512725 DGKHQ86XP1 1220 aa18.57■□□□□ 0.56
DDR1-269ENST00000512725 RNF135Q8IUD6 432 aa18.57■□□□□ 0.56
DDR1-269ENST00000512725 PHOX2BQ99453 314 aa18.57■□□□□ 0.56
DDR1-269ENST00000512725 PDCD2LQ9BRP1 358 aa18.57■□□□□ 0.56
DDR1-269ENST00000512725 C16orf70Q9BSU1 422 aa18.57■□□□□ 0.56
DDR1-269ENST00000512725 RNPEPQ9H4A4 650 aa18.57■□□□□ 0.56
DDR1-269ENST00000512725 TUT1Q9H6E5 874 aaKnown RBP18.57■□□□□ 0.56
DDR1-269ENST00000512725 JMJD4Q9H9V9 463 aa18.57■□□□□ 0.56
DDR1-269ENST00000512725 STXBP3O00186 592 aa18.56■□□□□ 0.56
DDR1-269ENST00000512725 ZNF213O14771 459 aa18.56■□□□□ 0.56
DDR1-269ENST00000512725 MBTPS2O43462 519 aa18.56■□□□□ 0.56
DDR1-269ENST00000512725 KDM4AO75164 1064 aa18.56■□□□□ 0.56
DDR1-269ENST00000512725 RGS20O76081 388 aa18.56■□□□□ 0.56
DDR1-269ENST00000512725 UBA1P22314 1058 aaKnown RBP18.56■□□□□ 0.56
DDR1-269ENST00000512725 SP2Q02086 613 aa18.56■□□□□ 0.56
DDR1-269ENST00000512725 DLX2Q07687 328 aaPredicted RBP18.56■□□□□ 0.56
DDR1-269ENST00000512725 HYAL1Q12794 435 aa18.56■□□□□ 0.56
DDR1-269ENST00000512725 SMAD2Q15796 467 aaKnown RBP18.56■□□□□ 0.56
DDR1-269ENST00000512725 CCDC178Q5BJE1 867 aa18.56■□□□□ 0.56
DDR1-269ENST00000512725 C11orf84Q9BUA3 381 aaPredicted RBP18.56■□□□□ 0.56
DDR1-269ENST00000512725 AMNQ9BXJ7 453 aa18.56■□□□□ 0.56
DDR1-269ENST00000512725 SETD4Q9NVD3 440 aa18.56■□□□□ 0.56
DDR1-269ENST00000512725 PCDHB15Q9Y5E8 787 aa18.56■□□□□ 0.56
DDR1-269ENST00000512725 RALGAPA2Q2PPJ7 1873 aa18.55■□□□□ 0.56
DDR1-269ENST00000512725 GRM6O15303 877 aa18.55■□□□□ 0.56
DDR1-269ENST00000512725 LGALS2P05162 132 aa18.55■□□□□ 0.56
DDR1-269ENST00000512725 HOXD8P13378 290 aaPredicted RBP18.55■□□□□ 0.56
DDR1-269ENST00000512725 CCND2P30279 289 aa18.55■□□□□ 0.56
DDR1-269ENST00000512725 GTF2F1P35269 517 aaKnown RBP eCLIP18.55■□□□□ 0.56
DDR1-269ENST00000512725 PGM5Q15124 567 aa18.55■□□□□ 0.56
DDR1-269ENST00000512725 FCHSD1Q86WN1 690 aa18.55■□□□□ 0.56
DDR1-269ENST00000512725 IL31RAQ8NI17 732 aa18.55■□□□□ 0.56
DDR1-269ENST00000512725 APBB2Q92870 758 aa18.55■□□□□ 0.56
DDR1-269ENST00000512725 GPKOWQ92917 476 aaPredicted RBP eCLIP18.55■□□□□ 0.56
DDR1-269ENST00000512725 RILPL2Q969X0 211 aa18.55■□□□□ 0.56
DDR1-269ENST00000512725 SNX27Q96L92 541 aa18.55■□□□□ 0.56
DDR1-269ENST00000512725 ZMYM6O95789 1325 aa18.54■□□□□ 0.56
DDR1-269ENST00000512725 B4E1Z4 1266 aa18.54■□□□□ 0.56
DDR1-269ENST00000512725 GNAT1P11488 350 aa18.54■□□□□ 0.56
DDR1-269ENST00000512725 BMPR1AP36894 532 aa18.54■□□□□ 0.56
DDR1-269ENST00000512725 NDUFV1P49821 464 aa18.54■□□□□ 0.56
DDR1-269ENST00000512725 HSD17B4P51659 736 aa18.54■□□□□ 0.56
DDR1-269ENST00000512725 HERC4Q5GLZ8 1057 aaPredicted RBP18.54■□□□□ 0.56
DDR1-269ENST00000512725 UTP14CQ5TAP6 766 aaKnown RBP18.54■□□□□ 0.56
DDR1-269ENST00000512725 PBXIP1Q96AQ6 731 aa18.54■□□□□ 0.56
DDR1-269ENST00000512725 ZSCAN10Q96SZ4 725 aaPredicted RBP18.54■□□□□ 0.56
DDR1-269ENST00000512725 CD207Q9UJ71 328 aa18.54■□□□□ 0.56
DDR1-269ENST00000512725 LINC01565O15544 149 aa18.53■□□□□ 0.56
DDR1-269ENST00000512725 RB1P06400 928 aa18.53■□□□□ 0.56
DDR1-269ENST00000512725 MFAP1P55081 439 aaKnown RBP18.53■□□□□ 0.56
DDR1-269ENST00000512725 ARHGAP4P98171 946 aa18.53■□□□□ 0.56
DDR1-269ENST00000512725 SP4Q02446 784 aa18.53■□□□□ 0.56
DDR1-269ENST00000512725 SMAD4Q13485 552 aaKnown RBP18.53■□□□□ 0.56
DDR1-269ENST00000512725 COL19A1Q14993 1142 aa18.53■□□□□ 0.56
DDR1-269ENST00000512725 VSIG10LQ86VR7 867 aa18.53■□□□□ 0.56
DDR1-269ENST00000512725 LMAN2LQ9H0V9 348 aa18.53■□□□□ 0.56
DDR1-269ENST00000512725 BCAS3Q9H6U6 928 aa18.53■□□□□ 0.56
DDR1-269ENST00000512725 RWDD3Q9Y3V2 267 aa18.53■□□□□ 0.56
DDR1-269ENST00000512725 PCDHA1Q9Y5I3 950 aa18.53■□□□□ 0.56
DDR1-269ENST00000512725 CAND2O75155 1236 aa18.52■□□□□ 0.56
DDR1-269ENST00000512725 TBX10O75333 385 aa18.52■□□□□ 0.56
DDR1-269ENST00000512725 TGFB3P10600 412 aa18.52■□□□□ 0.56
DDR1-269ENST00000512725 GHRP10912 638 aa18.52■□□□□ 0.56
DDR1-269ENST00000512725 PDE1AP54750 535 aa18.52■□□□□ 0.56
DDR1-269ENST00000512725 BTG3Q14201 252 aaPredicted RBP18.52■□□□□ 0.56
DDR1-269ENST00000512725 CTC1Q2NKJ3 1217 aa18.52■□□□□ 0.56
DDR1-269ENST00000512725 CYFIP1Q7L576 1253 aa18.52■□□□□ 0.56
DDR1-269ENST00000512725 HOMER1Q86YM7 354 aa18.52■□□□□ 0.56
DDR1-269ENST00000512725 SUGP1Q8IWZ8 645 aaKnown RBP18.52■□□□□ 0.56
DDR1-269ENST00000512725 STAG2Q8N3U4 1231 aa18.52■□□□□ 0.56
DDR1-269ENST00000512725 PRSS33Q8NF86 280 aa18.52■□□□□ 0.56
DDR1-269ENST00000512725 EDAQ92838 391 aa18.52■□□□□ 0.56
DDR1-269ENST00000512725 ALG13Q9NP73 1137 aaKnown RBP18.52■□□□□ 0.56
DDR1-269ENST00000512725 TRIOO75962 3097 aa18.52■□□□□ 0.55
DDR1-269ENST00000512725 ADGRA3Q8IWK6 1321 aa18.51■□□□□ 0.55
DDR1-269ENST00000512725 SALL3Q9BXA9 1300 aa18.51■□□□□ 0.55
DDR1-269ENST00000512725 ATG2AQ2TAZ0 1938 aa18.51■□□□□ 0.55
DDR1-269ENST00000512725 TMEM221A6NGB7 291 aa18.51■□□□□ 0.55
DDR1-269ENST00000512725 GCOM1H8Y6P7 765 aaPredicted RBP18.51■□□□□ 0.55
DDR1-269ENST00000512725 M0R296 226 aa18.51■□□□□ 0.55
DDR1-269ENST00000512725 OPLAHO14841 1288 aa18.51■□□□□ 0.55
DDR1-269ENST00000512725 POLR2MP0CAP2 368 aa18.51■□□□□ 0.55
DDR1-269ENST00000512725 PTPN5P54829 565 aa18.51■□□□□ 0.55
DDR1-269ENST00000512725 IER5LQ5T953 404 aa18.51■□□□□ 0.55
DDR1-269ENST00000512725 STOX1Q6ZVD7 989 aa18.51■□□□□ 0.55
DDR1-269ENST00000512725 TRIM50Q86XT4 487 aa18.51■□□□□ 0.55
DDR1-269ENST00000512725 ENAHQ8N8S7 591 aaPredicted RBP18.51■□□□□ 0.55
DDR1-269ENST00000512725 USP26Q9BXU7 913 aa18.51■□□□□ 0.55
DDR1-269ENST00000512725 ZNF215Q9UL58 517 aaPredicted RBP18.51■□□□□ 0.55
DDR1-269ENST00000512725 SUPT16HQ9Y5B9 1047 aaKnown RBP18.51■□□□□ 0.55
DDR1-269ENST00000512725 ZNF318Q5VUA4 2279 aa18.5■□□□□ 0.55
DDR1-269ENST00000512725 C5orf67F2Z3F1 127 aa18.5■□□□□ 0.55
DDR1-269ENST00000512725 GNPTABQ3T906 1256 aa18.5■□□□□ 0.55
DDR1-269ENST00000512725 IFIT1BQ5T764 474 aaKnown RBP18.5■□□□□ 0.55
DDR1-269ENST00000512725 PPP2R3CQ969Q6 453 aa18.5■□□□□ 0.55
DDR1-269ENST00000512725 UBAC1Q9BSL1 405 aa18.5■□□□□ 0.55
DDR1-269ENST00000512725 ZSWIM5Q9P217 1185 aa18.5■□□□□ 0.55
DDR1-269ENST00000512725 KLRF2D3W0D1 207 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms